RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-225	ENST00000583438	TRBV6-5	A0A0K0K1A5	114 aa		4.67	□□□□□ -1.66
PPP4R1-225	ENST00000583438	LOC107984640	A0A0U1RRK4	108 aa		4.67	□□□□□ -1.66
PPP4R1-225	ENST00000583438		F2Z2F3	143 aa		4.67	□□□□□ -1.66
PPP4R1-225	ENST00000583438	BCL2L11	O43521	198 aa		4.67	□□□□□ -1.66
PPP4R1-225	ENST00000583438	GNG4	P50150	75 aa		4.67	□□□□□ -1.66
PPP4R1-225	ENST00000583438	POLR2K	P53803	58 aa	Known RBP	4.67	□□□□□ -1.66
PPP4R1-225	ENST00000583438	RPS20	P60866	119 aa	Known RBP	4.67	□□□□□ -1.66
PPP4R1-225	ENST00000583438	CD164L2	Q6UWJ8	174 aa		4.67	□□□□□ -1.66
PPP4R1-225	ENST00000583438		Q6ZUT4	128 aa		4.67	□□□□□ -1.66
PPP4R1-225	ENST00000583438	ZNF664	Q8N3J9	261 aa		4.67	□□□□□ -1.66
PPP4R1-225	ENST00000583438	LITAF	Q99732	161 aa		4.67	□□□□□ -1.66
PPP4R1-225	ENST00000583438	UMAD1	C9J7I0	102 aa		4.66	□□□□□ -1.66
PPP4R1-225	ENST00000583438		H0Y9J4	135 aa		4.66	□□□□□ -1.66
PPP4R1-225	ENST00000583438	SMKR1	H3BMG3	65 aa		4.66	□□□□□ -1.66
PPP4R1-225	ENST00000583438		H7C423	109 aa		4.66	□□□□□ -1.66
PPP4R1-225	ENST00000583438	APOM	O95445	188 aa		4.66	□□□□□ -1.66
PPP4R1-225	ENST00000583438	NCR2	O95944	276 aa		4.66	□□□□□ -1.66
PPP4R1-225	ENST00000583438	MT-ND6	P03923	174 aa		4.66	□□□□□ -1.66
PPP4R1-225	ENST00000583438	NOTCH2NL	Q7Z3S9	236 aa		4.66	□□□□□ -1.66
PPP4R1-225	ENST00000583438	MRPL52	Q86TS9	123 aa	Known RBP	4.66	□□□□□ -1.66
PPP4R1-225	ENST00000583438	OCC1	Q8TAD7	63 aa		4.66	□□□□□ -1.66
PPP4R1-225	ENST00000583438	PRAC1	Q96KF2	57 aa		4.66	□□□□□ -1.66
PPP4R1-225	ENST00000583438	RPP21	Q9H633	154 aa	Known RBP	4.66	□□□□□ -1.66
PPP4R1-225	ENST00000583438	MANBAL	Q9NQG1	85 aa		4.66	□□□□□ -1.66
PPP4R1-225	ENST00000583438	LINC00474	Q9P2X8	69 aa		4.66	□□□□□ -1.66
PPP4R1-225	ENST00000583438		I3L3M4	83 aa		4.65	□□□□□ -1.67
PPP4R1-225	ENST00000583438	ZNF25	P17030	456 aa	Predicted RBP	4.65	□□□□□ -1.67
PPP4R1-225	ENST00000583438	C5orf38	Q86SI9	138 aa		4.65	□□□□□ -1.67
PPP4R1-225	ENST00000583438	UBE2D4	Q9Y2X8	147 aa		4.65	□□□□□ -1.67
PPP4R1-225	ENST00000583438	HMSD	A8MTL9	139 aa		4.64	□□□□□ -1.67
PPP4R1-225	ENST00000583438	MT3	P25713	68 aa		4.64	□□□□□ -1.67
PPP4R1-225	ENST00000583438	RPL18A	Q02543	176 aa	Known RBP	4.64	□□□□□ -1.67
PPP4R1-225	ENST00000583438	SMIM12	Q96EX1	92 aa		4.64	□□□□□ -1.67
PPP4R1-225	ENST00000583438	TRBV27	A0A0K0K1C4	114 aa		4.63	□□□□□ -1.67
PPP4R1-225	ENST00000583438	PMCH	P20382	165 aa		4.63	□□□□□ -1.67
PPP4R1-225	ENST00000583438	SPAG11B	Q08648	103 aa		4.63	□□□□□ -1.67
PPP4R1-225	ENST00000583438	PRR4	Q16378	134 aa		4.63	□□□□□ -1.67
PPP4R1-225	ENST00000583438	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.63	□□□□□ -1.67
PPP4R1-225	ENST00000583438	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.63	□□□□□ -1.67
PPP4R1-225	ENST00000583438	AMN1	Q8IY45	258 aa		4.63	□□□□□ -1.67
PPP4R1-225	ENST00000583438	CAMK2N2	Q96S95	79 aa		4.63	□□□□□ -1.67
PPP4R1-225	ENST00000583438	MED9	Q9NWA0	146 aa		4.63	□□□□□ -1.67
PPP4R1-225	ENST00000583438	C6orf48	Q9UBA6	75 aa		4.63	□□□□□ -1.67
PPP4R1-225	ENST00000583438	PYGO1	Q9Y3Y4	419 aa		4.63	□□□□□ -1.67
PPP4R1-225	ENST00000583438		A0A087X002	238 aa		4.62	□□□□□ -1.67
PPP4R1-225	ENST00000583438	TRAV13-1	A0A0B4J241	112 aa		4.62	□□□□□ -1.67
PPP4R1-225	ENST00000583438	RAB4A	P20338	218 aa		4.62	□□□□□ -1.67
PPP4R1-225	ENST00000583438	RPL39	P62891	51 aa	Known RBP	4.62	□□□□□ -1.67
PPP4R1-225	ENST00000583438	SS18	Q15532	418 aa		4.62	□□□□□ -1.67
PPP4R1-225	ENST00000583438	LBH	Q53QV2	105 aa	Predicted RBP	4.62	□□□□□ -1.67
PPP4R1-225	ENST00000583438	C9orf129	Q5T035	196 aa	Known RBP	4.62	□□□□□ -1.67
PPP4R1-225	ENST00000583438	MRAP2	Q96G30	205 aa		4.62	□□□□□ -1.67
PPP4R1-225	ENST00000583438	C2orf48	Q96LS8	159 aa		4.62	□□□□□ -1.67
PPP4R1-225	ENST00000583438		A0A087WZ39	114 aa		4.61	□□□□□ -1.67
PPP4R1-225	ENST00000583438	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.61	□□□□□ -1.67
PPP4R1-225	ENST00000583438	KANTR	A0A1W2PQU2	76 aa		4.61	□□□□□ -1.67
PPP4R1-225	ENST00000583438	XKRY2	A2RUG3	117 aa		4.61	□□□□□ -1.67
PPP4R1-225	ENST00000583438	C7orf77	A4D0Y5	90 aa		4.61	□□□□□ -1.67
PPP4R1-225	ENST00000583438	COX7A2L	O14548	114 aa		4.61	□□□□□ -1.67
PPP4R1-225	ENST00000583438	PDE6D	O43924	150 aa		4.61	□□□□□ -1.67
PPP4R1-225	ENST00000583438	KIAA0087	Q14695	138 aa		4.61	□□□□□ -1.67
PPP4R1-225	ENST00000583438	DIRC1	Q969H9	104 aa		4.61	□□□□□ -1.67
PPP4R1-225	ENST00000583438	IGLV1-50	A0A075B6I6	118 aa		4.6	□□□□□ -1.67
PPP4R1-225	ENST00000583438	TSPAN13	O95857	204 aa		4.6	□□□□□ -1.67
PPP4R1-225	ENST00000583438	EIF5A	P63241	154 aa	Known RBP	4.6	□□□□□ -1.67
PPP4R1-225	ENST00000583438	EIF5AL1	Q6IS14	154 aa	Known RBP	4.6	□□□□□ -1.67
PPP4R1-225	ENST00000583438	TMEM101	Q96IK0	257 aa		4.6	□□□□□ -1.67
PPP4R1-225	ENST00000583438	BTF3L4	Q96K17	158 aa		4.6	□□□□□ -1.67
PPP4R1-225	ENST00000583438	ST20	Q9HBF5	79 aa		4.6	□□□□□ -1.67
PPP4R1-225	ENST00000583438	BATF3	Q9NR55	127 aa		4.6	□□□□□ -1.67
PPP4R1-225	ENST00000583438	MRPL35	Q9NZE8	188 aa	Known RBP	4.6	□□□□□ -1.67
PPP4R1-225	ENST00000583438	C1orf196	B1AJZ1	125 aa		4.59	□□□□□ -1.67
PPP4R1-225	ENST00000583438	GATC	O43716	136 aa	Known RBP	4.59	□□□□□ -1.67
PPP4R1-225	ENST00000583438	TLX1NB	P0CAT3	122 aa		4.59	□□□□□ -1.67
PPP4R1-225	ENST00000583438	KRTAP13-2	Q52LG2	175 aa		4.59	□□□□□ -1.67
PPP4R1-225	ENST00000583438	ADAMTSL4-AS1	Q5T5F5	129 aa		4.59	□□□□□ -1.67
PPP4R1-225	ENST00000583438	C2orf82	Q6UX34	121 aa		4.59	□□□□□ -1.67
PPP4R1-225	ENST00000583438	FAM231D	Q6ZW35	169 aa		4.59	□□□□□ -1.67
PPP4R1-225	ENST00000583438	ORAOV1	Q8WV07	137 aa		4.59	□□□□□ -1.67
PPP4R1-225	ENST00000583438	RETNLB	Q9BQ08	111 aa		4.59	□□□□□ -1.67
PPP4R1-225	ENST00000583438	TMEM191A	Q9H0A3	160 aa		4.59	□□□□□ -1.67
PPP4R1-225	ENST00000583438	SMDT1	Q9H4I9	107 aa		4.59	□□□□□ -1.67
PPP4R1-225	ENST00000583438	CSDC2	Q9Y534	153 aa	Known RBP	4.59	□□□□□ -1.67
PPP4R1-225	ENST00000583438	HIGD1C	A8MV81	97 aa		4.58	□□□□□ -1.68
PPP4R1-225	ENST00000583438		M0QXV9	152 aa		4.58	□□□□□ -1.68
PPP4R1-225	ENST00000583438	ZC2HC1B	Q5TFG8	222 aa		4.58	□□□□□ -1.68
PPP4R1-225	ENST00000583438	ISOC2	Q96AB3	205 aa		4.58	□□□□□ -1.68
PPP4R1-225	ENST00000583438	KRTAP4-1	Q9BYQ7	146 aa		4.58	□□□□□ -1.68
PPP4R1-225	ENST00000583438	ANAPC11	Q9NYG5	84 aa		4.58	□□□□□ -1.68
PPP4R1-225	ENST00000583438	RGS21	Q2M5E4	152 aa		4.57	□□□□□ -1.68
PPP4R1-225	ENST00000583438	MRPL51	Q4U2R6	128 aa	Known RBP	4.57	□□□□□ -1.68
PPP4R1-225	ENST00000583438	TEX261	Q6UWH6	196 aa		4.57	□□□□□ -1.68
PPP4R1-225	ENST00000583438	LINC01551	Q86U37	167 aa		4.57	□□□□□ -1.68
PPP4R1-225	ENST00000583438		V9GYV3	84 aa		4.57	□□□□□ -1.68
PPP4R1-225	ENST00000583438	FSIP2	Q5CZC0	6907 aa		4.56	□□□□□ -1.68
PPP4R1-225	ENST00000583438		A0A1B0GUT8	65 aa		4.56	□□□□□ -1.68
PPP4R1-225	ENST00000583438		A8MWL6	223 aa		4.56	□□□□□ -1.68
PPP4R1-225	ENST00000583438	OR10D4P	Q8NGN7	298 aa		4.56	□□□□□ -1.68
PPP4R1-225	ENST00000583438	TSKU	Q8WUA8	353 aa		4.56	□□□□□ -1.68
PPP4R1-225	ENST00000583438	TIMM21	Q9BVV7	248 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms