RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 LAMTOR2Q9Y2Q5 125 aa13.95□□□□□ -0.18
CASC3-207ENST00000581849 IGHV3OR16-9A0A0B4J2B5 98 aa13.94□□□□□ -0.18
CASC3-207ENST00000581849 SPAG11BQ08648 103 aa13.94□□□□□ -0.18
CASC3-207ENST00000581849 TMEM136Q6ZRR5 245 aa13.94□□□□□ -0.18
CASC3-207ENST00000581849 PRSS47A8MTI9 375 aa13.93□□□□□ -0.18
CASC3-207ENST00000581849 RAB5AP20339 215 aa13.93□□□□□ -0.18
CASC3-207ENST00000581849 PRELID3AQ96N28 172 aa13.93□□□□□ -0.18
CASC3-207ENST00000581849 GAGE2BQ13066 116 aa13.92□□□□□ -0.18
CASC3-207ENST00000581849 ANAPC16Q96DE5 110 aa13.92□□□□□ -0.18
CASC3-207ENST00000581849 PYGO1Q9Y3Y4 419 aa13.92□□□□□ -0.18
CASC3-207ENST00000581849 IFITM10A6NMD0 228 aa13.91□□□□□ -0.18
CASC3-207ENST00000581849 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.91□□□□□ -0.18
CASC3-207ENST00000581849 IFI27P40305 119 aaPredicted RBP13.91□□□□□ -0.18
CASC3-207ENST00000581849 Q6ZRP5 223 aa13.91□□□□□ -0.18
CASC3-207ENST00000581849 MT-ND4LP03901 98 aa13.9□□□□□ -0.18
CASC3-207ENST00000581849 RAB14P61106 215 aa13.9□□□□□ -0.18
CASC3-207ENST00000581849 SPINK6Q6UWN8 80 aa13.9□□□□□ -0.18
CASC3-207ENST00000581849 MRPL35Q9NZE8 188 aaKnown RBP13.9□□□□□ -0.18
CASC3-207ENST00000581849 ORAOV1Q8WV07 137 aa13.89□□□□□ -0.19
CASC3-207ENST00000581849 LINC01600Q96MT4 127 aa13.89□□□□□ -0.19
CASC3-207ENST00000581849 OPRPNQ99935 248 aaPredicted RBP13.89□□□□□ -0.19
CASC3-207ENST00000581849 MAP1LC3AQ9H492 121 aa13.87□□□□□ -0.19
CASC3-207ENST00000581849 TGIF2-C20orf24A0A0A6YYL0 155 aa13.86□□□□□ -0.19
CASC3-207ENST00000581849 NDUFA1O15239 70 aa13.86□□□□□ -0.19
CASC3-207ENST00000581849 IMMP2LQ96T52 175 aa13.86□□□□□ -0.19
CASC3-207ENST00000581849 TNXBP22105 4242 aa13.86□□□□□ -0.19
CASC3-207ENST00000581849 IGLV4-3A0A075B6K6 122 aa13.85□□□□□ -0.19
CASC3-207ENST00000581849 A0A1W2PNN7 141 aa13.85□□□□□ -0.19
CASC3-207ENST00000581849 RPL18AQ02543 176 aaKnown RBP13.85□□□□□ -0.19
CASC3-207ENST00000581849 SRSF9Q13242 221 aaKnown RBP eCLIP13.85□□□□□ -0.19
CASC3-207ENST00000581849 C9orf116Q5BN46 136 aaPredicted RBP13.85□□□□□ -0.19
CASC3-207ENST00000581849 REG3GQ6UW15 175 aa13.85□□□□□ -0.19
CASC3-207ENST00000581849 TMEM141Q96I45 108 aa13.85□□□□□ -0.19
CASC3-207ENST00000581849 A0A087WZ39 114 aa13.84□□□□□ -0.19
CASC3-207ENST00000581849 K7EMI3 77 aa13.84□□□□□ -0.19
CASC3-207ENST00000581849 TLX1NBP0CAT3 122 aa13.84□□□□□ -0.19
CASC3-207ENST00000581849 Q8N8P6 123 aa13.84□□□□□ -0.19
CASC3-207ENST00000581849 NPSP0C0P6 89 aa13.82□□□□□ -0.2
CASC3-207ENST00000581849 LINC00242Q5T6M2 205 aa13.82□□□□□ -0.2
CASC3-207ENST00000581849 TEX43Q6ZNM6 134 aa13.82□□□□□ -0.2
CASC3-207ENST00000581849 CYSLTR1Q9Y271 337 aa13.82□□□□□ -0.2
CASC3-207ENST00000581849 A0A0J9YXV3 536 aa13.81□□□□□ -0.2
CASC3-207ENST00000581849 CLLU1Q5K131 121 aa13.81□□□□□ -0.2
CASC3-207ENST00000581849 LINC01561Q8N1V8 128 aa13.81□□□□□ -0.2
CASC3-207ENST00000581849 LOC389332A0A1B0GUA5 103 aa13.8□□□□□ -0.2
CASC3-207ENST00000581849 ORMDL2Q53FV1 153 aa13.8□□□□□ -0.2
CASC3-207ENST00000581849 C2orf88Q9BSF0 95 aa13.8□□□□□ -0.2
CASC3-207ENST00000581849 KIAA0087Q14695 138 aa13.79□□□□□ -0.2
CASC3-207ENST00000581849 C2orf66Q6UXQ4 117 aa13.79□□□□□ -0.2
CASC3-207ENST00000581849 Q6ZN92 141 aa13.79□□□□□ -0.2
CASC3-207ENST00000581849 C6orf48Q9UBA6 75 aa13.79□□□□□ -0.2
CASC3-207ENST00000581849 UBE2D1P51668 147 aa13.78□□□□□ -0.2
CASC3-207ENST00000581849 C10orf25Q5T742 122 aa13.78□□□□□ -0.2
CASC3-207ENST00000581849 NXT2Q9NPJ8 142 aaKnown RBP13.78□□□□□ -0.2
CASC3-207ENST00000581849 UBR4Q5T4S7 5183 aa13.77□□□□□ -0.21
CASC3-207ENST00000581849 UNQ6190/PRO20217Q6UXQ8 127 aa13.77□□□□□ -0.21
CASC3-207ENST00000581849 AMELXQ99217 191 aa13.77□□□□□ -0.21
CASC3-207ENST00000581849 PSORS1C2Q9UIG4 136 aa13.77□□□□□ -0.21
CASC3-207ENST00000581849 TRBV30A0A0K0K1B3 111 aa13.76□□□□□ -0.21
CASC3-207ENST00000581849 G0S2P27469 103 aa13.76□□□□□ -0.21
CASC3-207ENST00000581849 CTDSP1Q9GZU7 261 aa13.76□□□□□ -0.21
CASC3-207ENST00000581849 MT-ND6P03923 174 aa13.75□□□□□ -0.21
CASC3-207ENST00000581849 KRTAP10-8P60410 259 aa13.75□□□□□ -0.21
CASC3-207ENST00000581849 UQCC3Q6UW78 93 aa13.75□□□□□ -0.21
CASC3-207ENST00000581849 LINC00173Q6ZV60 143 aa13.75□□□□□ -0.21
CASC3-207ENST00000581849 FAM19A3Q7Z5A8 133 aa13.75□□□□□ -0.21
CASC3-207ENST00000581849 VCX2Q9H322 139 aa13.75□□□□□ -0.21
CASC3-207ENST00000581849 IGIPA6NJ69 53 aa13.74□□□□□ -0.21
CASC3-207ENST00000581849 PHF5AQ7RTV0 110 aaKnown RBP13.74□□□□□ -0.21
CASC3-207ENST00000581849 TRAV9-1A0A075B6T8 112 aa13.73□□□□□ -0.21
CASC3-207ENST00000581849 PAPPA-AS1Q5QFB9 102 aa13.73□□□□□ -0.21
CASC3-207ENST00000581849 PACRGQ96M98 296 aaPredicted RBP13.71□□□□□ -0.21
CASC3-207ENST00000581849 NDUFC2-KCTD14E9PQ53 114 aa13.7□□□□□ -0.22
CASC3-207ENST00000581849 SEC11AP67812 179 aa13.7□□□□□ -0.22
CASC3-207ENST00000581849 C1orf137Q5JT78 98 aa13.7□□□□□ -0.22
CASC3-207ENST00000581849 TIMM17AQ99595 171 aa13.7□□□□□ -0.22
CASC3-207ENST00000581849 TMEM218A2RU14 115 aa13.69□□□□□ -0.22
CASC3-207ENST00000581849 ADCYAP1P18509 176 aa13.69□□□□□ -0.22
CASC3-207ENST00000581849 FAM168BA1KXE4 195 aa13.68□□□□□ -0.22
CASC3-207ENST00000581849 HERVK_113P63121 156 aa13.68□□□□□ -0.22
CASC3-207ENST00000581849 GAGE2EQ4V326 116 aa13.68□□□□□ -0.22
CASC3-207ENST00000581849 C2orf82Q6UX34 121 aa13.68□□□□□ -0.22
CASC3-207ENST00000581849 GAGE2DQ9UEU5 116 aa13.68□□□□□ -0.22
CASC3-207ENST00000581849 PRSS2P07478 247 aa13.67□□□□□ -0.22
CASC3-207ENST00000581849 ZC2HC1BQ5TFG8 222 aa13.67□□□□□ -0.22
CASC3-207ENST00000581849 Q8IZM0 81 aa13.67□□□□□ -0.22
CASC3-207ENST00000581849 TOMM6Q96B49 74 aa13.67□□□□□ -0.22
CASC3-207ENST00000581849 LINC01549A6NIU2 74 aa13.66□□□□□ -0.22
CASC3-207ENST00000581849 IGLV7-43P04211 117 aa13.66□□□□□ -0.22
CASC3-207ENST00000581849 FAM19A5Q7Z5A7 132 aaPredicted RBP13.66□□□□□ -0.22
CASC3-207ENST00000581849 DIRC1Q969H9 104 aa13.65□□□□□ -0.22
CASC3-207ENST00000581849 SEC11CQ9BY50 192 aa13.65□□□□□ -0.22
CASC3-207ENST00000581849 CKS1BP61024 79 aa13.64□□□□□ -0.23
CASC3-207ENST00000581849 M0QXV9 152 aa13.63□□□□□ -0.23
CASC3-207ENST00000581849 C6orf226Q5I0X4 101 aa13.63□□□□□ -0.23
CASC3-207ENST00000581849 ERASQ7Z444 233 aa13.63□□□□□ -0.23
CASC3-207ENST00000581849 KRTAP7-1Q8IUC3 87 aa13.63□□□□□ -0.23
CASC3-207ENST00000581849 GNB1LQ9BYB4 327 aa13.63□□□□□ -0.23
CASC3-207ENST00000581849 S100PP25815 95 aa13.62□□□□□ -0.23
CASC3-207ENST00000581849 ODF1Q14990 250 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms