RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 WFDC2Q14508 124 aa-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 SMIM4Q8WVI0 70 aa-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 AQP10Q96PS8 301 aa-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 PAIP2BQ9ULR5 123 aaKnown RBP-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 SPCS1Q9Y6A9 102 aa-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 DNAH7Q8WXX0 4024 aa-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 USF3Q68DE3 2245 aa-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 ARAP2Q8WZ64 1704 aa-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 GRIN2AQ12879 1464 aa-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 DYNC1H1Q14204 4646 aaKnown RBP-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 PPRC1Q5VV67 1664 aaKnown RBP-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 SPTBN1Q01082 2364 aaKnown RBP-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 USP34Q70CQ2 3546 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 PKD1P98161 4303 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 TRAV13-2A0A0B4J235 113 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 CTXND1A0A1B0GTU2 59 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 SPAARA0A1B0GVQ0 90 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 HCG22E2RYF7 251 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 M0R135 149 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 HIST1H1DP16402 221 aaKnown RBP-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 S100A3P33764 101 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 ASIPP42127 132 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 ARPC4P59998 168 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 SPAG11BQ08648 103 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 DEFB109BQ30KR1 87 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 C10orf128Q5T292 105 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 SPAG11AQ6PDA7 123 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 Q8IZM0 81 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 TTC9CQ8N5M4 171 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 PDCD10Q9BUL8 212 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 LRRC37A2A6NM11 1700 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 UTRNP46939 3433 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 SBF2Q86WG5 1849 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 ZNF236Q9UL36 1845 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 MRC1P22897 1456 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 TCHHQ07283 1943 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 MYO7BQ6PIF6 2116 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 VPS13CQ709C8 3753 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 DNAH1Q9P2D7 4330 aa-0.11□□□□□ -2.43
SMCHD1-207ENST00000581711 FRYQ5TBA9 3013 aa-0.12□□□□□ -2.43
SMCHD1-207ENST00000581711 DMXL1Q9Y485 3027 aa-0.12□□□□□ -2.43
SMCHD1-207ENST00000581711 HAMPP81172 84 aa-0.12□□□□□ -2.43
SMCHD1-207ENST00000581711 RBM3P98179 157 aaKnown RBP-0.12□□□□□ -2.43
SMCHD1-207ENST00000581711 Q5VSD8 79 aa-0.12□□□□□ -2.43
SMCHD1-207ENST00000581711 C12orf73Q69YU5 71 aa-0.12□□□□□ -2.43
SMCHD1-207ENST00000581711 AGPAT4-IT1Q9H0P7 198 aa-0.12□□□□□ -2.43
SMCHD1-207ENST00000581711 LENEPQ9Y5L5 61 aa-0.12□□□□□ -2.43
SMCHD1-207ENST00000581711 DNAH14Q0VDD8 3507 aa-0.12□□□□□ -2.43
SMCHD1-207ENST00000581711 PPIP5K1Q6PFW1 1433 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 LRP6O75581 1613 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 PSME4Q14997 1843 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 FOCADQ5VW36 1801 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 HTTP42858 3142 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 SETBP1Q9Y6X0 1596 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 CFTRP13569 1480 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 PRKDCP78527 4128 aaKnown RBP-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 FAM25AB3EWG3 89 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 FAM25CB3EWG5 89 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 FAM25GB3EWG6 89 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 BCE1O60756 84 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 Q6AWC8 147 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 Q8N8P6 123 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 ARL11Q969Q4 196 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 SNRNP25Q9BV90 132 aaKnown RBP-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 RERGLQ9H628 205 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 TP53AIP1Q9HCN2 124 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 SERP1Q9Y6X1 66 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 V9GYH0 126 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 FAT1Q14517 4588 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 PHLPP1O60346 1717 aa-0.13□□□□□ -2.43
SMCHD1-207ENST00000581711 KIF21AQ7Z4S6 1674 aa-0.14□□□□□ -2.43
SMCHD1-207ENST00000581711 BICRAQ9NZM4 1560 aa-0.14□□□□□ -2.43
SMCHD1-207ENST00000581711 SPRR1AP35321 89 aa-0.14□□□□□ -2.43
SMCHD1-207ENST00000581711 SELENOWP63302 87 aa-0.14□□□□□ -2.43
SMCHD1-207ENST00000581711 DCDP81605 110 aaKnown RBP-0.14□□□□□ -2.43
SMCHD1-207ENST00000581711 COX17Q14061 63 aa-0.14□□□□□ -2.43
SMCHD1-207ENST00000581711 CCDC58Q4VC31 144 aa-0.14□□□□□ -2.43
SMCHD1-207ENST00000581711 MEIG1Q5JSS6 88 aa-0.14□□□□□ -2.43
SMCHD1-207ENST00000581711 TMEM170BQ5T4T1 132 aa-0.14□□□□□ -2.43
SMCHD1-207ENST00000581711 LSM10Q969L4 123 aaKnown RBP-0.14□□□□□ -2.43
SMCHD1-207ENST00000581711 LINC00470Q9BZP3 86 aa-0.14□□□□□ -2.43
SMCHD1-207ENST00000581711 NAA60Q9H7X0 242 aa-0.14□□□□□ -2.43
SMCHD1-207ENST00000581711 LAMC1P11047 1609 aa-0.14□□□□□ -2.43
SMCHD1-207ENST00000581711 C10orf71Q711Q0 1435 aa-0.14□□□□□ -2.43
SMCHD1-207ENST00000581711 TSC2P49815 1807 aa-0.15□□□□□ -2.43
SMCHD1-207ENST00000581711 MED14O60244 1454 aa-0.15□□□□□ -2.43
SMCHD1-207ENST00000581711 FXYD6-FXYD2A0A087WZ82 144 aa-0.15□□□□□ -2.43
SMCHD1-207ENST00000581711 UQCR11O14957 56 aa-0.15□□□□□ -2.43
SMCHD1-207ENST00000581711 GNG7O60262 68 aa-0.15□□□□□ -2.43
SMCHD1-207ENST00000581711 KRTAP20-2Q3LI61 65 aa-0.15□□□□□ -2.43
SMCHD1-207ENST00000581711 BAGE2Q86Y30 109 aa-0.15□□□□□ -2.43
SMCHD1-207ENST00000581711 PPP3R2Q96LZ3 170 aa-0.15□□□□□ -2.43
SMCHD1-207ENST00000581711 DYNLRB1Q9NP97 96 aa-0.15□□□□□ -2.43
SMCHD1-207ENST00000581711 HMGXB3Q12766 1538 aa-0.15□□□□□ -2.43
SMCHD1-207ENST00000581711 SPENQ96T58 3664 aaKnown RBP-0.15□□□□□ -2.43
SMCHD1-207ENST00000581711 ACACAQ13085 2346 aa-0.16□□□□□ -2.43
SMCHD1-207ENST00000581711 TRBV7-3A0A075B6L6 115 aa-0.16□□□□□ -2.44
SMCHD1-207ENST00000581711 TRBV6-1A0A0K0K1D8 114 aa-0.16□□□□□ -2.44
SMCHD1-207ENST00000581711 F8VRH5 84 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms