RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 TIMM21Q9BVV7 248 aa13.49□□□□□ -0.25
CCDC42-203ENST00000581598 LINC01549A6NIU2 74 aa13.48□□□□□ -0.25
CCDC42-203ENST00000581598 PMCHL1Q16048 86 aa13.48□□□□□ -0.25
CCDC42-203ENST00000581598 IGLV10-54A0A075B6I4 117 aa13.47□□□□□ -0.25
CCDC42-203ENST00000581598 UBE2L6O14933 153 aa13.47□□□□□ -0.25
CCDC42-203ENST00000581598 S100A6P06703 90 aa13.47□□□□□ -0.25
CCDC42-203ENST00000581598 FGF6P10767 208 aa13.47□□□□□ -0.25
CCDC42-203ENST00000581598 CNBPP62633 177 aaKnown RBP13.47□□□□□ -0.25
CCDC42-203ENST00000581598 PDZD11Q5EBL8 140 aa13.47□□□□□ -0.25
CCDC42-203ENST00000581598 FAM19A2Q8N3H0 131 aa13.47□□□□□ -0.25
CCDC42-203ENST00000581598 UBE2D4Q9Y2X8 147 aa13.47□□□□□ -0.25
CCDC42-203ENST00000581598 SPANXA1Q9NS26 97 aa13.46□□□□□ -0.25
CCDC42-203ENST00000581598 TMA7Q9Y2S6 64 aaKnown RBP13.46□□□□□ -0.25
CCDC42-203ENST00000581598 PYGO1Q9Y3Y4 419 aa13.46□□□□□ -0.25
CCDC42-203ENST00000581598 CSDC2Q9Y534 153 aaKnown RBP13.46□□□□□ -0.25
CCDC42-203ENST00000581598 ZNF25P17030 456 aaPredicted RBP13.45□□□□□ -0.26
CCDC42-203ENST00000581598 SMAGPQ0VAQ4 97 aa13.45□□□□□ -0.26
CCDC42-203ENST00000581598 SDIM1Q6ZPB5 146 aa13.45□□□□□ -0.26
CCDC42-203ENST00000581598 C5orf52A6NGY3 159 aa13.44□□□□□ -0.26
CCDC42-203ENST00000581598 IGIPA6NJ69 53 aa13.44□□□□□ -0.26
CCDC42-203ENST00000581598 NPSP0C0P6 89 aa13.43□□□□□ -0.26
CCDC42-203ENST00000581598 ERASQ7Z444 233 aa13.43□□□□□ -0.26
CCDC42-203ENST00000581598 HIST3H2BBQ8N257 126 aa13.43□□□□□ -0.26
CCDC42-203ENST00000581598 FAM104AQ969W3 186 aa13.43□□□□□ -0.26
CCDC42-203ENST00000581598 PACRGQ96M98 296 aaPredicted RBP13.43□□□□□ -0.26
CCDC42-203ENST00000581598 TIMM17AQ99595 171 aa13.43□□□□□ -0.26
CCDC42-203ENST00000581598 SNRPEP62304 92 aaKnown RBP13.42□□□□□ -0.26
CCDC42-203ENST00000581598 MRPS36P82909 103 aaKnown RBP13.42□□□□□ -0.26
CCDC42-203ENST00000581598 AMMECR1LQ6DCA0 310 aa13.42□□□□□ -0.26
CCDC42-203ENST00000581598 SCGB3A1Q96QR1 104 aa13.42□□□□□ -0.26
CCDC42-203ENST00000581598 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.42□□□□□ -0.26
CCDC42-203ENST00000581598 hDV102S1A0JD36 115 aa13.41□□□□□ -0.26
CCDC42-203ENST00000581598 OXTP01178 125 aa13.41□□□□□ -0.26
CCDC42-203ENST00000581598 CIRBPQ14011 172 aaKnown RBP13.41□□□□□ -0.26
CCDC42-203ENST00000581598 IGLV4-3A0A075B6K6 122 aa13.4□□□□□ -0.26
CCDC42-203ENST00000581598 RPL37AP61513 92 aaKnown RBP13.4□□□□□ -0.26
CCDC42-203ENST00000581598 OR5A1Q8NGJ0 315 aa13.4□□□□□ -0.26
CCDC42-203ENST00000581598 TMEM141Q96I45 108 aa13.4□□□□□ -0.26
CCDC42-203ENST00000581598 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.39□□□□□ -0.27
CCDC42-203ENST00000581598 PANO1I0J062 215 aa13.39□□□□□ -0.27
CCDC42-203ENST00000581598 ATP5LO75964 103 aa13.39□□□□□ -0.27
CCDC42-203ENST00000581598 LEPROTL1O95214 131 aa13.39□□□□□ -0.27
CCDC42-203ENST00000581598 Q6ZUT4 128 aa13.39□□□□□ -0.27
CCDC42-203ENST00000581598 TMEM101Q96IK0 257 aa13.39□□□□□ -0.27
CCDC42-203ENST00000581598 CDC42SE2Q9NRR3 84 aa13.39□□□□□ -0.27
CCDC42-203ENST00000581598 SLPIP03973 132 aa13.38□□□□□ -0.27
CCDC42-203ENST00000581598 LINC00173Q6ZV60 143 aa13.38□□□□□ -0.27
CCDC42-203ENST00000581598 OPRPNQ99935 248 aaPredicted RBP13.38□□□□□ -0.27
CCDC42-203ENST00000581598 LRP1Q07954 4544 aaKnown RBP13.38□□□□□ -0.27
CCDC42-203ENST00000581598 IGHV3-64A0A075B6Q5 118 aa13.37□□□□□ -0.27
CCDC42-203ENST00000581598 CFAP161Q6P656 301 aa13.37□□□□□ -0.27
CCDC42-203ENST00000581598 HSPB8Q9UJY1 196 aa13.37□□□□□ -0.27
CCDC42-203ENST00000581598 IFITM10A6NMD0 228 aa13.36□□□□□ -0.27
CCDC42-203ENST00000581598 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.36□□□□□ -0.27
CCDC42-203ENST00000581598 ZNF664Q8N3J9 261 aa13.36□□□□□ -0.27
CCDC42-203ENST00000581598 C15orf56Q8N910 161 aa13.36□□□□□ -0.27
CCDC42-203ENST00000581598 IFI27L1Q96BM0 104 aa13.36□□□□□ -0.27
CCDC42-203ENST00000581598 AMELXQ99217 191 aa13.36□□□□□ -0.27
CCDC42-203ENST00000581598 HIST1H2BLQ99880 126 aa13.36□□□□□ -0.27
CCDC42-203ENST00000581598 HMCN2Q8NDA2 5059 aa13.35□□□□□ -0.27
CCDC42-203ENST00000581598 GAGE12HA6NDE8 117 aa13.35□□□□□ -0.27
CCDC42-203ENST00000581598 FABP4P15090 132 aa13.35□□□□□ -0.27
CCDC42-203ENST00000581598 S100A2P29034 98 aa13.35□□□□□ -0.27
CCDC42-203ENST00000581598 PAPPA-AS1Q5QFB9 102 aa13.35□□□□□ -0.27
CCDC42-203ENST00000581598 Q6ZN92 141 aa13.33□□□□□ -0.28
CCDC42-203ENST00000581598 CHCHD10Q8WYQ3 142 aaPredicted RBP13.33□□□□□ -0.28
CCDC42-203ENST00000581598 RNASE13Q5GAN3 156 aaKnown RBP13.32□□□□□ -0.28
CCDC42-203ENST00000581598 VCX2Q9H322 139 aa13.32□□□□□ -0.28
CCDC42-203ENST00000581598 IGKV3OR2-268A0A0C4DH90 116 aa13.31□□□□□ -0.28
CCDC42-203ENST00000581598 TEX43Q6ZNM6 134 aa13.31□□□□□ -0.28
CCDC42-203ENST00000581598 SPACA4Q8TDM5 124 aa13.31□□□□□ -0.28
CCDC42-203ENST00000581598 FAT3Q8TDW7 4589 aa13.31□□□□□ -0.28
CCDC42-203ENST00000581598 HNRNPA3P51991 378 aaKnown RBP13.3□□□□□ -0.28
CCDC42-203ENST00000581598 PMVKQ15126 192 aa13.3□□□□□ -0.28
CCDC42-203ENST00000581598 ZC2HC1BQ5TFG8 222 aa13.3□□□□□ -0.28
CCDC42-203ENST00000581598 PKHD1L1Q86WI1 4243 aa13.29□□□□□ -0.28
CCDC42-203ENST00000581598 GVQW2A0A096LPI5 108 aaPredicted RBP13.29□□□□□ -0.28
CCDC42-203ENST00000581598 TRAV12-1A0A0B4J245 112 aa13.29□□□□□ -0.28
CCDC42-203ENST00000581598 SERTAD4-AS1Q5TG53 156 aa13.29□□□□□ -0.28
CCDC42-203ENST00000581598 C2orf88Q9BSF0 95 aa13.29□□□□□ -0.28
CCDC42-203ENST00000581598 CST9LQ9H4G1 147 aa13.29□□□□□ -0.28
CCDC42-203ENST00000581598 UBR4Q5T4S7 5183 aa13.29□□□□□ -0.28
CCDC42-203ENST00000581598 A0A087WYN8 130 aa13.28□□□□□ -0.28
CCDC42-203ENST00000581598 FOXI1Q12951 378 aa13.28□□□□□ -0.28
CCDC42-203ENST00000581598 MAP1LC3CQ9BXW4 147 aa13.28□□□□□ -0.28
CCDC42-203ENST00000581598 PLAC8Q9NZF1 115 aa13.28□□□□□ -0.28
CCDC42-203ENST00000581598 C3orf79P0CE67 100 aa13.27□□□□□ -0.29
CCDC42-203ENST00000581598 UBE2D1P51668 147 aa13.27□□□□□ -0.29
CCDC42-203ENST00000581598 LINC00959A0A1B0GUT2 108 aa13.26□□□□□ -0.29
CCDC42-203ENST00000581598 SYS1-DBNDD2H3BUS1 97 aa13.26□□□□□ -0.29
CCDC42-203ENST00000581598 CCL25O15444 150 aa13.26□□□□□ -0.29
CCDC42-203ENST00000581598 CHTF8P0CG12 524 aa13.26□□□□□ -0.29
CCDC42-203ENST00000581598 HIGD2BQ4VC39 106 aa13.26□□□□□ -0.29
CCDC42-203ENST00000581598 FAM19A3Q7Z5A8 133 aa13.26□□□□□ -0.29
CCDC42-203ENST00000581598 DPH3Q96FX2 82 aa13.26□□□□□ -0.29
CCDC42-203ENST00000581598 TRAV13-1A0A0B4J241 112 aa13.24□□□□□ -0.29
CCDC42-203ENST00000581598 COX6A2Q02221 97 aa13.24□□□□□ -0.29
CCDC42-203ENST00000581598 ODF1Q14990 250 aa13.24□□□□□ -0.29
CCDC42-203ENST00000581598 PET117Q6UWS5 81 aa13.24□□□□□ -0.29
CCDC42-203ENST00000581598 Q6ZRU5 148 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms