RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 SHANK1Q9Y566 2161 aa5.56□□□□□ -1.52
CMTM4-205ENST00000581487 CRIP2P52943 208 aaPredicted RBP5.56□□□□□ -1.52
CMTM4-205ENST00000581487 DEFB1P60022 68 aa5.56□□□□□ -1.52
CMTM4-205ENST00000581487 LINC01556Q5JQF7 62 aa5.56□□□□□ -1.52
CMTM4-205ENST00000581487 SZT2Q5T011 3432 aa5.56□□□□□ -1.52
CMTM4-205ENST00000581487 A0A087WVE0 104 aa5.56□□□□□ -1.52
CMTM4-205ENST00000581487 CEMP1Q6PRD7 247 aaPredicted RBP5.56□□□□□ -1.52
CMTM4-205ENST00000581487 ATP11AUNQ6ZP68 121 aa5.56□□□□□ -1.52
CMTM4-205ENST00000581487 ARFGEF3Q5TH69 2177 aa5.55□□□□□ -1.52
CMTM4-205ENST00000581487 NOTCH4Q99466 2003 aa5.55□□□□□ -1.52
CMTM4-205ENST00000581487 ZNF22P17026 224 aaPredicted RBP5.55□□□□□ -1.52
CMTM4-205ENST00000581487 CHCHD10Q8WYQ3 142 aaPredicted RBP5.55□□□□□ -1.52
CMTM4-205ENST00000581487 DOPEY2Q9Y3R5 2298 aa5.55□□□□□ -1.52
CMTM4-205ENST00000581487 REG3GQ6UW15 175 aa5.55□□□□□ -1.52
CMTM4-205ENST00000581487 CCDC140Q96MF4 163 aa5.55□□□□□ -1.52
CMTM4-205ENST00000581487 NBASA2RRP1 2371 aa5.55□□□□□ -1.52
CMTM4-205ENST00000581487 CADP27708 2225 aa5.54□□□□□ -1.52
CMTM4-205ENST00000581487 CDIP1Q9H305 208 aa5.54□□□□□ -1.52
CMTM4-205ENST00000581487 C6orf99Q4VX62 202 aa5.54□□□□□ -1.52
CMTM4-205ENST00000581487 IGLV4-69A0A075B6H9 119 aa5.54□□□□□ -1.52
CMTM4-205ENST00000581487 M0R378 163 aa5.54□□□□□ -1.52
CMTM4-205ENST00000581487 NRACQ8N912 160 aa5.54□□□□□ -1.52
CMTM4-205ENST00000581487 NUP210Q8TEM1 1887 aaPredicted RBP5.54□□□□□ -1.52
CMTM4-205ENST00000581487 CRIP1P50238 77 aa5.54□□□□□ -1.52
CMTM4-205ENST00000581487 U3KQK5 164 aa5.54□□□□□ -1.52
CMTM4-205ENST00000581487 EML5Q05BV3 1969 aa5.53□□□□□ -1.52
CMTM4-205ENST00000581487 LINC01547P58512 204 aaPredicted RBP5.53□□□□□ -1.52
CMTM4-205ENST00000581487 LINC00575Q6W349 94 aa5.53□□□□□ -1.52
CMTM4-205ENST00000581487 LINC00308Q8TCZ7 52 aa5.53□□□□□ -1.52
CMTM4-205ENST00000581487 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.53□□□□□ -1.52
CMTM4-205ENST00000581487 ZNF106Q9H2Y7 1883 aaKnown RBP5.53□□□□□ -1.52
CMTM4-205ENST00000581487 ODF3BA8MYP8 253 aa5.53□□□□□ -1.52
CMTM4-205ENST00000581487 TNFRSF13BO14836 293 aaPredicted RBP5.53□□□□□ -1.52
CMTM4-205ENST00000581487 IGLV4-60A0A075B6I1 120 aa5.53□□□□□ -1.52
CMTM4-205ENST00000581487 HCG22E2RYF7 251 aa5.53□□□□□ -1.52
CMTM4-205ENST00000581487 C20orf203Q8NBC4 194 aa5.53□□□□□ -1.52
CMTM4-205ENST00000581487 NUP210LQ5VU65 1888 aa5.53□□□□□ -1.52
CMTM4-205ENST00000581487 Q6ZS46 218 aa5.53□□□□□ -1.52
CMTM4-205ENST00000581487 URB1-AS1Q96HZ7 61 aa5.53□□□□□ -1.52
CMTM4-205ENST00000581487 UNQ9165/PRO28630Q6UXU0 137 aa5.52□□□□□ -1.53
CMTM4-205ENST00000581487 Q8N814 137 aa5.52□□□□□ -1.53
CMTM4-205ENST00000581487 Q8N6K4 173 aa5.52□□□□□ -1.53
CMTM4-205ENST00000581487 ZFHX2Q9C0A1 2572 aaPredicted RBP5.52□□□□□ -1.53
CMTM4-205ENST00000581487 TRBV10-1A0A0K0K1A3 114 aa5.52□□□□□ -1.53
CMTM4-205ENST00000581487 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.52□□□□□ -1.53
CMTM4-205ENST00000581487 ZFAND2AQ8N6M9 145 aa5.52□□□□□ -1.53
CMTM4-205ENST00000581487 CREBBPQ92793 2442 aa5.52□□□□□ -1.53
CMTM4-205ENST00000581487 USF3Q68DE3 2245 aa5.52□□□□□ -1.53
CMTM4-205ENST00000581487 PRO3102Q9H379 93 aa5.51□□□□□ -1.53
CMTM4-205ENST00000581487 SPTAN1Q13813 2472 aaKnown RBP5.51□□□□□ -1.53
CMTM4-205ENST00000581487 TMEM131Q92545 1883 aa5.51□□□□□ -1.53
CMTM4-205ENST00000581487 SPACA4Q8TDM5 124 aa5.51□□□□□ -1.53
CMTM4-205ENST00000581487 PKDREJQ9NTG1 2253 aa5.51□□□□□ -1.53
CMTM4-205ENST00000581487 C9orf129Q5T035 196 aaKnown RBP5.51□□□□□ -1.53
CMTM4-205ENST00000581487 C19orf84I3L1E1 186 aa5.51□□□□□ -1.53
CMTM4-205ENST00000581487 ADORA2A-AS1P86434 159 aa5.51□□□□□ -1.53
CMTM4-205ENST00000581487 C4orf3Q8WVX3 66 aa5.5□□□□□ -1.53
CMTM4-205ENST00000581487 ARHGAP32A7KAX9 2087 aa5.5□□□□□ -1.53
CMTM4-205ENST00000581487 ERC2-IT1O76042 136 aa5.5□□□□□ -1.53
CMTM4-205ENST00000581487 TRBV10-3A0A0K0K1G6 114 aa5.5□□□□□ -1.53
CMTM4-205ENST00000581487 MAP6D1Q9H9H5 199 aa5.5□□□□□ -1.53
CMTM4-205ENST00000581487 CACNA1HO95180 2353 aa5.5□□□□□ -1.53
CMTM4-205ENST00000581487 RPS28P62857 69 aaKnown RBP5.49□□□□□ -1.53
CMTM4-205ENST00000581487 ADAMTS9Q9P2N4 1935 aa5.49□□□□□ -1.53
CMTM4-205ENST00000581487 PCNX1Q96RV3 2341 aa5.49□□□□□ -1.53
CMTM4-205ENST00000581487 MRGPRG-AS1Q2M3A8 158 aa5.49□□□□□ -1.53
CMTM4-205ENST00000581487 SMIM11BQ8TCY0 68 aa5.49□□□□□ -1.53
CMTM4-205ENST00000581487 A0A0J9YX75 114 aa5.48□□□□□ -1.53
CMTM4-205ENST00000581487 FAM19A4Q96LR4 140 aa5.48□□□□□ -1.53
CMTM4-205ENST00000581487 EPM2AB3EWF7 344 aa5.48□□□□□ -1.53
CMTM4-205ENST00000581487 Q8NA96 180 aa5.48□□□□□ -1.53
CMTM4-205ENST00000581487 FBXL19-AS1Q494R0 122 aa5.48□□□□□ -1.53
CMTM4-205ENST00000581487 C11orf21Q9P2W6 132 aa5.48□□□□□ -1.53
CMTM4-205ENST00000581487 GAS8-AS1O95177 125 aa5.47□□□□□ -1.53
CMTM4-205ENST00000581487 CDKN2A-AS1Q9UH64 79 aa5.47□□□□□ -1.53
CMTM4-205ENST00000581487 ZNF407Q9C0G0 2248 aa5.47□□□□□ -1.53
CMTM4-205ENST00000581487 KIF26AQ9ULI4 1882 aaPredicted RBP5.47□□□□□ -1.53
CMTM4-205ENST00000581487 WNK2Q9Y3S1 2297 aa5.47□□□□□ -1.53
CMTM4-205ENST00000581487 C6orf48Q9UBA6 75 aa5.47□□□□□ -1.53
CMTM4-205ENST00000581487 TRBV6-5A0A0K0K1A5 114 aa5.47□□□□□ -1.53
CMTM4-205ENST00000581487 LINC00467Q9BRT7 94 aa5.47□□□□□ -1.53
CMTM4-205ENST00000581487 LTBP2Q14767 1821 aa5.46□□□□□ -1.53
CMTM4-205ENST00000581487 FSTL3O95633 263 aa5.46□□□□□ -1.53
CMTM4-205ENST00000581487 Q6ZTC4 211 aa5.46□□□□□ -1.53
CMTM4-205ENST00000581487 COX17Q14061 63 aa5.46□□□□□ -1.54
CMTM4-205ENST00000581487 MALRD1Q5VYJ5 2156 aa5.46□□□□□ -1.54
CMTM4-205ENST00000581487 F8WDY8 70 aa5.46□□□□□ -1.54
CMTM4-205ENST00000581487 SPATA3Q8NHX4 192 aa5.46□□□□□ -1.54
CMTM4-205ENST00000581487 EP400Q96L91 3159 aa5.45□□□□□ -1.54
CMTM4-205ENST00000581487 LYPD5Q6UWN5 251 aa5.45□□□□□ -1.54
CMTM4-205ENST00000581487 MUC6Q6W4X9 2439 aa5.45□□□□□ -1.54
CMTM4-205ENST00000581487 LMO4P61968 165 aa5.45□□□□□ -1.54
CMTM4-205ENST00000581487 Q6ZSV7 163 aa5.45□□□□□ -1.54
CMTM4-205ENST00000581487 Q9UF83 564 aa5.45□□□□□ -1.54
CMTM4-205ENST00000581487 MUC22E2RYF6 1773 aaPredicted RBP5.45□□□□□ -1.54
CMTM4-205ENST00000581487 TTC28Q96AY4 2481 aa5.44□□□□□ -1.54
CMTM4-205ENST00000581487 NCOA6Q14686 2063 aaPredicted RBP5.44□□□□□ -1.54
CMTM4-205ENST00000581487 A0A0A0MQY5 61 aa5.44□□□□□ -1.54
CMTM4-205ENST00000581487 PRR9Q5T870 116 aa5.44□□□□□ -1.54
CMTM4-205ENST00000581487 C1orf64Q8NEQ6 169 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms