RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 PLA2G2DQ9UNK4 145 aa7.79□□□□□ -1.16
SENP3-204ENST00000580997 IGLV4-69A0A075B6H9 119 aa7.78□□□□□ -1.16
SENP3-204ENST00000580997 A0A1B0GXF2 115 aa7.78□□□□□ -1.16
SENP3-204ENST00000580997 TNFRSF6BO95407 300 aa7.78□□□□□ -1.16
SENP3-204ENST00000580997 MALP21145 153 aa7.78□□□□□ -1.16
SENP3-204ENST00000580997 FAM104AQ969W3 186 aa7.78□□□□□ -1.16
SENP3-204ENST00000580997 TRAV13-1A0A0B4J241 112 aa7.77□□□□□ -1.17
SENP3-204ENST00000580997 F8W036 122 aa7.77□□□□□ -1.17
SENP3-204ENST00000580997 S100A8P05109 93 aa7.77□□□□□ -1.17
SENP3-204ENST00000580997 PTTG1IPP53801 180 aa7.77□□□□□ -1.17
SENP3-204ENST00000580997 HBBP68871 147 aa7.77□□□□□ -1.17
SENP3-204ENST00000580997 RNASE13Q5GAN3 156 aaKnown RBP7.77□□□□□ -1.17
SENP3-204ENST00000580997 LCE5AQ5TCM9 118 aa7.77□□□□□ -1.17
SENP3-204ENST00000580997 Q6ZUT4 128 aa7.77□□□□□ -1.17
SENP3-204ENST00000580997 C2orf48Q96LS8 159 aa7.77□□□□□ -1.17
SENP3-204ENST00000580997 LOC107984640A0A0U1RRK4 108 aa7.76□□□□□ -1.17
SENP3-204ENST00000580997 D6R8Y8 96 aa7.76□□□□□ -1.17
SENP3-204ENST00000580997 PPBPP02775 128 aa7.76□□□□□ -1.17
SENP3-204ENST00000580997 LINC01600Q96MT4 127 aa7.76□□□□□ -1.17
SENP3-204ENST00000580997 SMIM2Q9BVW6 85 aa7.76□□□□□ -1.17
SENP3-204ENST00000580997 RPL39P62891 51 aaKnown RBP7.75□□□□□ -1.17
SENP3-204ENST00000580997 MRPS36P82909 103 aaKnown RBP7.75□□□□□ -1.17
SENP3-204ENST00000580997 SRSF9Q13242 221 aaKnown RBP eCLIP7.75□□□□□ -1.17
SENP3-204ENST00000580997 MRPL54Q6P161 138 aaKnown RBP7.75□□□□□ -1.17
SENP3-204ENST00000580997 C5orf38Q86SI9 138 aa7.75□□□□□ -1.17
SENP3-204ENST00000580997 SPANXA1Q9NS26 97 aa7.75□□□□□ -1.17
SENP3-204ENST00000580997 IGHV3OR16-9A0A0B4J2B5 98 aa7.74□□□□□ -1.17
SENP3-204ENST00000580997 APOMO95445 188 aa7.74□□□□□ -1.17
SENP3-204ENST00000580997 NPYP01303 97 aa7.74□□□□□ -1.17
SENP3-204ENST00000580997 RNF151Q2KHN1 245 aa7.74□□□□□ -1.17
SENP3-204ENST00000580997 SPINK6Q6UWN8 80 aa7.74□□□□□ -1.17
SENP3-204ENST00000580997 CAMK2N2Q96S95 79 aa7.74□□□□□ -1.17
SENP3-204ENST00000580997 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.73□□□□□ -1.17
SENP3-204ENST00000580997 GAGE2BQ13066 116 aa7.73□□□□□ -1.17
SENP3-204ENST00000580997 Q6ZRP5 223 aa7.73□□□□□ -1.17
SENP3-204ENST00000580997 ATP5L2Q7Z4Y8 100 aa7.73□□□□□ -1.17
SENP3-204ENST00000580997 OR10D4PQ8NGN7 298 aa7.73□□□□□ -1.17
SENP3-204ENST00000580997 OPRPNQ99935 248 aaPredicted RBP7.73□□□□□ -1.17
SENP3-204ENST00000580997 A0A1W2PNN7 141 aa7.72□□□□□ -1.17
SENP3-204ENST00000580997 PRSS47A8MTI9 375 aa7.72□□□□□ -1.17
SENP3-204ENST00000580997 F8WDY8 70 aa7.72□□□□□ -1.17
SENP3-204ENST00000580997 TMEM136Q6ZRR5 245 aa7.72□□□□□ -1.17
SENP3-204ENST00000580997 ORMDL3Q8N138 153 aa7.72□□□□□ -1.17
SENP3-204ENST00000580997 KRTAP10-8P60410 259 aa7.71□□□□□ -1.18
SENP3-204ENST00000580997 SPAG11BQ08648 103 aa7.71□□□□□ -1.18
SENP3-204ENST00000580997 MRPL35Q9NZE8 188 aaKnown RBP7.71□□□□□ -1.18
SENP3-204ENST00000580997 PYGO1Q9Y3Y4 419 aa7.71□□□□□ -1.18
SENP3-204ENST00000580997 A0A0J9YXV3 536 aa7.7□□□□□ -1.18
SENP3-204ENST00000580997 RAB5AP20339 215 aa7.7□□□□□ -1.18
SENP3-204ENST00000580997 C9orf116Q5BN46 136 aaPredicted RBP7.7□□□□□ -1.18
SENP3-204ENST00000580997 PRELID3AQ96N28 172 aa7.7□□□□□ -1.18
SENP3-204ENST00000580997 LAMTOR2Q9Y2Q5 125 aa7.7□□□□□ -1.18
SENP3-204ENST00000580997 IFITM10A6NMD0 228 aa7.69□□□□□ -1.18
SENP3-204ENST00000580997 PNRC1Q12796 327 aaPredicted RBP7.69□□□□□ -1.18
SENP3-204ENST00000580997 REG3GQ6UW15 175 aa7.69□□□□□ -1.18
SENP3-204ENST00000580997 ORAOV1Q8WV07 137 aa7.69□□□□□ -1.18
SENP3-204ENST00000580997 A0A087WZ39 114 aa7.68□□□□□ -1.18
SENP3-204ENST00000580997 IFI27P40305 119 aaPredicted RBP7.68□□□□□ -1.18
SENP3-204ENST00000580997 ANAPC16Q96DE5 110 aa7.68□□□□□ -1.18
SENP3-204ENST00000580997 IMMP2LQ96T52 175 aa7.68□□□□□ -1.18
SENP3-204ENST00000580997 IGLV4-3A0A075B6K6 122 aa7.67□□□□□ -1.18
SENP3-204ENST00000580997 NDUFA1O15239 70 aa7.67□□□□□ -1.18
SENP3-204ENST00000580997 TLX1NBP0CAT3 122 aa7.67□□□□□ -1.18
SENP3-204ENST00000580997 RPL18AQ02543 176 aaKnown RBP7.67□□□□□ -1.18
SENP3-204ENST00000580997 KIAA0087Q14695 138 aa7.67□□□□□ -1.18
SENP3-204ENST00000580997 LINC00242Q5T6M2 205 aa7.67□□□□□ -1.18
SENP3-204ENST00000580997 C10orf25Q5T742 122 aa7.67□□□□□ -1.18
SENP3-204ENST00000580997 PSORS1C2Q9UIG4 136 aa7.67□□□□□ -1.18
SENP3-204ENST00000580997 RNF213Q63HN8 5207 aa7.66□□□□□ -1.18
SENP3-204ENST00000580997 TGIF2-C20orf24A0A0A6YYL0 155 aa7.66□□□□□ -1.18
SENP3-204ENST00000580997 MT-ND4LP03901 98 aa7.66□□□□□ -1.18
SENP3-204ENST00000580997 UNQ6190/PRO20217Q6UXQ8 127 aa7.66□□□□□ -1.18
SENP3-204ENST00000580997 TMEM141Q96I45 108 aa7.66□□□□□ -1.18
SENP3-204ENST00000580997 LRP2P98164 4655 aa7.66□□□□□ -1.18
SENP3-204ENST00000580997 PHF5AQ7RTV0 110 aaKnown RBP7.65□□□□□ -1.18
SENP3-204ENST00000580997 Q8N8P6 123 aa7.65□□□□□ -1.18
SENP3-204ENST00000580997 MAP1LC3AQ9H492 121 aa7.65□□□□□ -1.18
SENP3-204ENST00000580997 C6orf48Q9UBA6 75 aa7.65□□□□□ -1.18
SENP3-204ENST00000580997 LOC389332A0A1B0GUA5 103 aa7.64□□□□□ -1.19
SENP3-204ENST00000580997 K7EMI3 77 aa7.64□□□□□ -1.19
SENP3-204ENST00000580997 NPSP0C0P6 89 aa7.64□□□□□ -1.19
SENP3-204ENST00000580997 UBE2D1P51668 147 aa7.64□□□□□ -1.19
SENP3-204ENST00000580997 LINC01561Q8N1V8 128 aa7.64□□□□□ -1.19
SENP3-204ENST00000580997 MT-ND6P03923 174 aa7.63□□□□□ -1.19
SENP3-204ENST00000580997 RAB14P61106 215 aa7.63□□□□□ -1.19
SENP3-204ENST00000580997 ODF1Q14990 250 aa7.63□□□□□ -1.19
SENP3-204ENST00000580997 C2orf66Q6UXQ4 117 aa7.63□□□□□ -1.19
SENP3-204ENST00000580997 TEX43Q6ZNM6 134 aa7.63□□□□□ -1.19
SENP3-204ENST00000580997 FAM19A3Q7Z5A8 133 aa7.63□□□□□ -1.19
SENP3-204ENST00000580997 AMELXQ99217 191 aa7.63□□□□□ -1.19
SENP3-204ENST00000580997 CYSLTR1Q9Y271 337 aa7.63□□□□□ -1.19
SENP3-204ENST00000580997 TRBV30A0A0K0K1B3 111 aa7.62□□□□□ -1.19
SENP3-204ENST00000580997 FAM168BA1KXE4 195 aa7.62□□□□□ -1.19
SENP3-204ENST00000580997 IGIPA6NJ69 53 aa7.62□□□□□ -1.19
SENP3-204ENST00000580997 ORMDL2Q53FV1 153 aa7.62□□□□□ -1.19
SENP3-204ENST00000580997 C1orf137Q5JT78 98 aa7.62□□□□□ -1.19
SENP3-204ENST00000580997 LINC00173Q6ZV60 143 aa7.62□□□□□ -1.19
SENP3-204ENST00000580997 KRTAP11-1Q8IUC1 163 aa7.61□□□□□ -1.19
SENP3-204ENST00000580997 KRTAP7-1Q8IUC3 87 aa7.61□□□□□ -1.19
SENP3-204ENST00000580997 C2orf88Q9BSF0 95 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms