RNA–Protein interactions for RNA: ENST00000580542.5

ITGB4-207, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-207ENST00000580542 HILS1P60008 231 aa9.97□□□□□ -0.81
ITGB4-207ENST00000580542 ZANQ9Y493 2812 aa9.97□□□□□ -0.81
ITGB4-207ENST00000580542 SOCS3O14543 225 aa9.97□□□□□ -0.81
ITGB4-207ENST00000580542 TIMM17BO60830 172 aa9.97□□□□□ -0.81
ITGB4-207ENST00000580542 TRBV12-3P01733 135 aa9.97□□□□□ -0.81
ITGB4-207ENST00000580542 HIST2H2BCQ6DN03 193 aa9.97□□□□□ -0.81
ITGB4-207ENST00000580542 UNC79Q9P2D8 2635 aa9.96□□□□□ -0.81
ITGB4-207ENST00000580542 XCL1P47992 114 aa9.96□□□□□ -0.82
ITGB4-207ENST00000580542 ZNF625Q96I27 306 aaPredicted RBP9.96□□□□□ -0.82
ITGB4-207ENST00000580542 XCL2Q9UBD3 114 aa9.96□□□□□ -0.82
ITGB4-207ENST00000580542 KNCNA6PVL3 124 aa9.95□□□□□ -0.82
ITGB4-207ENST00000580542 SMIM26A0A096LP01 95 aa9.95□□□□□ -0.82
ITGB4-207ENST00000580542 Q96MF0 132 aa9.95□□□□□ -0.82
ITGB4-207ENST00000580542 C16orf95Q9H693 158 aa9.95□□□□□ -0.82
ITGB4-207ENST00000580542 EPM2AB3EWF7 344 aa9.94□□□□□ -0.82
ITGB4-207ENST00000580542 C9orf129Q5T035 196 aaKnown RBP9.94□□□□□ -0.82
ITGB4-207ENST00000580542 BRD3OSQ6XYD6 125 aa9.94□□□□□ -0.82
ITGB4-207ENST00000580542 MOB4Q9Y3A3 225 aa9.94□□□□□ -0.82
ITGB4-207ENST00000580542 WFDC9Q8NEX5 89 aa9.94□□□□□ -0.82
ITGB4-207ENST00000580542 F6UB75 175 aa9.93□□□□□ -0.82
ITGB4-207ENST00000580542 M0QY20 66 aa9.93□□□□□ -0.82
ITGB4-207ENST00000580542 RPL28P46779 137 aaKnown RBP9.93□□□□□ -0.82
ITGB4-207ENST00000580542 FP248Q71RG6 208 aaPredicted RBP9.93□□□□□ -0.82
ITGB4-207ENST00000580542 ITPR2Q14571 2701 aa9.93□□□□□ -0.82
ITGB4-207ENST00000580542 ITPR3Q14573 2671 aa9.92□□□□□ -0.82
ITGB4-207ENST00000580542 A6NDX4 124 aa9.92□□□□□ -0.82
ITGB4-207ENST00000580542 NDUFA4O00483 81 aa9.92□□□□□ -0.82
ITGB4-207ENST00000580542 APRG1Q8IVJ8 170 aa9.91□□□□□ -0.82
ITGB4-207ENST00000580542 MAPK1IP1LQ8NDC0 245 aa9.91□□□□□ -0.82
ITGB4-207ENST00000580542 H7BZZ5 65 aa9.91□□□□□ -0.82
ITGB4-207ENST00000580542 NDUFA1O15239 70 aa9.91□□□□□ -0.82
ITGB4-207ENST00000580542 COPS9Q8WXC6 57 aa9.91□□□□□ -0.82
ITGB4-207ENST00000580542 IGHV3-11P01762 117 aa9.9□□□□□ -0.82
ITGB4-207ENST00000580542 Q9H8V8 135 aa9.9□□□□□ -0.82
ITGB4-207ENST00000580542 CREBBPQ92793 2442 aa9.9□□□□□ -0.82
ITGB4-207ENST00000580542 TEX15Q9BXT5 2789 aa9.89□□□□□ -0.83
ITGB4-207ENST00000580542 IGKV3-7A0A075B6H7 116 aa9.89□□□□□ -0.83
ITGB4-207ENST00000580542 SOSTDC1Q6X4U4 206 aa9.89□□□□□ -0.83
ITGB4-207ENST00000580542 NCR3O14931 201 aa9.89□□□□□ -0.83
ITGB4-207ENST00000580542 HIST2H2BDQ6DRA6 164 aa9.89□□□□□ -0.83
ITGB4-207ENST00000580542 MXRA5Q9NR99 2828 aa9.89□□□□□ -0.83
ITGB4-207ENST00000580542 ANK3Q12955 4377 aaKnown RBP9.89□□□□□ -0.83
ITGB4-207ENST00000580542 FAM19A1Q7Z5A9 133 aa9.88□□□□□ -0.83
ITGB4-207ENST00000580542 LINC00474Q9P2X8 69 aa9.88□□□□□ -0.83
ITGB4-207ENST00000580542 CDKN2A-AS1Q9UH64 79 aa9.88□□□□□ -0.83
ITGB4-207ENST00000580542 RBM3P98179 157 aaKnown RBP9.87□□□□□ -0.83
ITGB4-207ENST00000580542 ENHOQ6UWT2 76 aa9.87□□□□□ -0.83
ITGB4-207ENST00000580542 FAM104AQ969W3 186 aa9.87□□□□□ -0.83
ITGB4-207ENST00000580542 H3BUX3 64 aa9.87□□□□□ -0.83
ITGB4-207ENST00000580542 LYPD5Q6UWN5 251 aa9.87□□□□□ -0.83
ITGB4-207ENST00000580542 A0A087WYN8 130 aa9.86□□□□□ -0.83
ITGB4-207ENST00000580542 KRTAP1-1Q07627 177 aa9.86□□□□□ -0.83
ITGB4-207ENST00000580542 LY6EQ16553 131 aa9.86□□□□□ -0.83
ITGB4-207ENST00000580542 DEFB112Q30KQ8 113 aa9.86□□□□□ -0.83
ITGB4-207ENST00000580542 RHPN1-AS1Q9BWJ2 59 aa9.86□□□□□ -0.83
ITGB4-207ENST00000580542 OVOL2Q9BRP0 275 aa9.86□□□□□ -0.83
ITGB4-207ENST00000580542 S100A7L2Q5SY68 101 aa9.86□□□□□ -0.83
ITGB4-207ENST00000580542 USMG5Q96IX5 58 aa9.86□□□□□ -0.83
ITGB4-207ENST00000580542 KLLNB2CW77 178 aa9.85□□□□□ -0.83
ITGB4-207ENST00000580542 Q6YL49 198 aa9.85□□□□□ -0.83
ITGB4-207ENST00000580542 CSPG4Q6UVK1 2322 aa9.85□□□□□ -0.83
ITGB4-207ENST00000580542 SNURFQ9Y675 71 aa9.85□□□□□ -0.83
ITGB4-207ENST00000580542 H3BUA1 57 aa9.84□□□□□ -0.83
ITGB4-207ENST00000580542 PIK3CD-AS1Q5SR53 167 aa9.84□□□□□ -0.83
ITGB4-207ENST00000580542 LINC00482Q8N8I6 264 aa9.84□□□□□ -0.83
ITGB4-207ENST00000580542 CRPP02741 224 aa9.84□□□□□ -0.83
ITGB4-207ENST00000580542 FLNAP21333 2647 aaKnown RBP9.83□□□□□ -0.84
ITGB4-207ENST00000580542 TRBV7-6A0A0J9YX20 115 aa9.83□□□□□ -0.84
ITGB4-207ENST00000580542 F8WEM9 126 aa9.83□□□□□ -0.84
ITGB4-207ENST00000580542 BLCAPP62952 87 aa9.83□□□□□ -0.84
ITGB4-207ENST00000580542 SS18Q15532 418 aa9.83□□□□□ -0.84
ITGB4-207ENST00000580542 OBSCN-AS1Q96MR7 158 aa9.83□□□□□ -0.84
ITGB4-207ENST00000580542 TRAV13-2A0A0B4J235 113 aa9.82□□□□□ -0.84
ITGB4-207ENST00000580542 ATP5EP2Q5VTU8 51 aa9.82□□□□□ -0.84
ITGB4-207ENST00000580542 IL17DQ8TAD2 202 aa9.82□□□□□ -0.84
ITGB4-207ENST00000580542 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.82□□□□□ -0.84
ITGB4-207ENST00000580542 IGKV2-29A2NJV5 120 aaPredicted RBP9.82□□□□□ -0.84
ITGB4-207ENST00000580542 IGHV4-59P01825 116 aa9.82□□□□□ -0.84
ITGB4-207ENST00000580542 CCKP06307 115 aa9.82□□□□□ -0.84
ITGB4-207ENST00000580542 CFHR3Q02985 330 aa9.82□□□□□ -0.84
ITGB4-207ENST00000580542 RMI2Q96E14 147 aa9.82□□□□□ -0.84
ITGB4-207ENST00000580542 LECT2O14960 151 aa9.81□□□□□ -0.84
ITGB4-207ENST00000580542 IGHV3-73A0A0B4J1V6 119 aa9.81□□□□□ -0.84
ITGB4-207ENST00000580542 TRAV7A0A075B6U4 112 aa9.8□□□□□ -0.84
ITGB4-207ENST00000580542 IGLV1-40P01703 118 aa9.8□□□□□ -0.84
ITGB4-207ENST00000580542 HECTD1Q9ULT8 2610 aa9.8□□□□□ -0.84
ITGB4-207ENST00000580542 SLPIP03973 132 aa9.8□□□□□ -0.84
ITGB4-207ENST00000580542 FASNP49327 2511 aaKnown RBP9.8□□□□□ -0.84
ITGB4-207ENST00000580542 IGHV3-16A0A0C4DH30 117 aa9.8□□□□□ -0.84
ITGB4-207ENST00000580542 MIR7-3HGQ8N6C7 128 aa9.8□□□□□ -0.84
ITGB4-207ENST00000580542 MPLKIPQ8TAP9 179 aa9.8□□□□□ -0.84
ITGB4-207ENST00000580542 CCDC168Q8NDH2 2452 aa9.79□□□□□ -0.84
ITGB4-207ENST00000580542 PF4P02776 101 aa9.79□□□□□ -0.84
ITGB4-207ENST00000580542 KLKP1Q107X0 134 aa9.79□□□□□ -0.84
ITGB4-207ENST00000580542 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.79□□□□□ -0.84
ITGB4-207ENST00000580542 SMIM11BQ8TCY0 68 aa9.78□□□□□ -0.84
ITGB4-207ENST00000580542 OTOGQ6ZRI0 2925 aa9.78□□□□□ -0.84
ITGB4-207ENST00000580542 COX6A2Q02221 97 aa9.78□□□□□ -0.84
ITGB4-207ENST00000580542 H0YGX0 51 aa9.77□□□□□ -0.84
ITGB4-207ENST00000580542 DGAT2L7PQ6IED9 249 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms