RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 NXT2Q9NPJ8 142 aaKnown RBP8.53□□□□□ -1.04
TRAF4-214ENST00000580073 CSDC2Q9Y534 153 aaKnown RBP8.53□□□□□ -1.04
TRAF4-214ENST00000580073 LINC00959A0A1B0GUT2 108 aa8.51□□□□□ -1.05
TRAF4-214ENST00000580073 TRGC2P03986 189 aa8.51□□□□□ -1.05
TRAF4-214ENST00000580073 ZC2HC1BQ5TFG8 222 aa8.51□□□□□ -1.05
TRAF4-214ENST00000580073 C2orf66Q6UXQ4 117 aa8.51□□□□□ -1.05
TRAF4-214ENST00000580073 PRSS3P2Q8NHM4 247 aa8.51□□□□□ -1.05
TRAF4-214ENST00000580073 TMEM101Q96IK0 257 aa8.51□□□□□ -1.05
TRAF4-214ENST00000580073 A0A087WYN8 130 aa8.5□□□□□ -1.05
TRAF4-214ENST00000580073 A0A096LNJ9 63 aa8.5□□□□□ -1.05
TRAF4-214ENST00000580073 PANO1I0J062 215 aa8.5□□□□□ -1.05
TRAF4-214ENST00000580073 ATP6V1G1O75348 118 aa8.5□□□□□ -1.05
TRAF4-214ENST00000580073 PLAC8Q9NZF1 115 aa8.5□□□□□ -1.05
TRAF4-214ENST00000580073 IGLV4-3A0A075B6K6 122 aa8.49□□□□□ -1.05
TRAF4-214ENST00000580073 GAGE12HA6NDE8 117 aa8.49□□□□□ -1.05
TRAF4-214ENST00000580073 IGIPA6NJ69 53 aa8.49□□□□□ -1.05
TRAF4-214ENST00000580073 MT1HL1P0DM35 61 aa8.49□□□□□ -1.05
TRAF4-214ENST00000580073 ORMDL2Q53FV1 153 aa8.49□□□□□ -1.05
TRAF4-214ENST00000580073 CHCHD10Q8WYQ3 142 aaPredicted RBP8.49□□□□□ -1.05
TRAF4-214ENST00000580073 TMEM18Q96B42 140 aa8.49□□□□□ -1.05
TRAF4-214ENST00000580073 SPANXA1Q9NS26 97 aa8.49□□□□□ -1.05
TRAF4-214ENST00000580073 PYGO1Q9Y3Y4 419 aa8.49□□□□□ -1.05
TRAF4-214ENST00000580073 UBR4Q5T4S7 5183 aa8.49□□□□□ -1.05
TRAF4-214ENST00000580073 K7EMI3 77 aa8.48□□□□□ -1.05
TRAF4-214ENST00000580073 MRPS36P82909 103 aaKnown RBP8.48□□□□□ -1.05
TRAF4-214ENST00000580073 FOXI1Q12951 378 aa8.48□□□□□ -1.05
TRAF4-214ENST00000580073 LINC00173Q6ZV60 143 aa8.48□□□□□ -1.05
TRAF4-214ENST00000580073 TOMM6Q96B49 74 aa8.48□□□□□ -1.05
TRAF4-214ENST00000580073 LINC00474Q9P2X8 69 aa8.48□□□□□ -1.05
TRAF4-214ENST00000580073 CYSLTR1Q9Y271 337 aa8.48□□□□□ -1.05
TRAF4-214ENST00000580073 CCL25O15444 150 aa8.47□□□□□ -1.05
TRAF4-214ENST00000580073 TRAV13-1A0A0B4J241 112 aa8.46□□□□□ -1.06
TRAF4-214ENST00000580073 LINC00614P0C842 121 aa8.46□□□□□ -1.06
TRAF4-214ENST00000580073 CHTF8P0CG12 524 aa8.46□□□□□ -1.06
TRAF4-214ENST00000580073 XCL1P47992 114 aa8.46□□□□□ -1.06
TRAF4-214ENST00000580073 LINC00310P59036 64 aa8.46□□□□□ -1.06
TRAF4-214ENST00000580073 PMCHL1Q16048 86 aa8.46□□□□□ -1.06
TRAF4-214ENST00000580073 FA2HQ7L5A8 372 aa8.46□□□□□ -1.06
TRAF4-214ENST00000580073 C15orf56Q8N910 161 aa8.46□□□□□ -1.06
TRAF4-214ENST00000580073 MAJINQ3KP22 176 aa8.45□□□□□ -1.06
TRAF4-214ENST00000580073 AMELXQ99217 191 aa8.45□□□□□ -1.06
TRAF4-214ENST00000580073 GVQW2A0A096LPI5 108 aaPredicted RBP8.44□□□□□ -1.06
TRAF4-214ENST00000580073 IGKV2-24A0A0C4DH68 120 aa8.44□□□□□ -1.06
TRAF4-214ENST00000580073 NUPR1O60356 82 aa8.44□□□□□ -1.06
TRAF4-214ENST00000580073 PRR3P79522 188 aaKnown RBP8.44□□□□□ -1.06
TRAF4-214ENST00000580073 COX6A2Q02221 97 aa8.44□□□□□ -1.06
TRAF4-214ENST00000580073 SMAGPQ0VAQ4 97 aa8.44□□□□□ -1.06
TRAF4-214ENST00000580073 REG3GQ6UW15 175 aa8.44□□□□□ -1.06
TRAF4-214ENST00000580073 TMEM141Q96I45 108 aa8.44□□□□□ -1.06
TRAF4-214ENST00000580073 SLPIP03973 132 aa8.43□□□□□ -1.06
TRAF4-214ENST00000580073 S100A1P23297 94 aa8.43□□□□□ -1.06
TRAF4-214ENST00000580073 SS18Q15532 418 aa8.43□□□□□ -1.06
TRAF4-214ENST00000580073 HIGD2BQ4VC39 106 aa8.43□□□□□ -1.06
TRAF4-214ENST00000580073 CD164L2Q6UWJ8 174 aa8.43□□□□□ -1.06
TRAF4-214ENST00000580073 STPG4Q8N801 248 aa8.43□□□□□ -1.06
TRAF4-214ENST00000580073 TIMM17AQ99595 171 aa8.43□□□□□ -1.06
TRAF4-214ENST00000580073 IFITM10A6NMD0 228 aa8.42□□□□□ -1.06
TRAF4-214ENST00000580073 C1orf196B1AJZ1 125 aa8.42□□□□□ -1.06
TRAF4-214ENST00000580073 UBE2D1P51668 147 aa8.42□□□□□ -1.06
TRAF4-214ENST00000580073 PDZD11Q5EBL8 140 aa8.42□□□□□ -1.06
TRAF4-214ENST00000580073 LINC00242Q5T6M2 205 aa8.42□□□□□ -1.06
TRAF4-214ENST00000580073 ERASQ7Z444 233 aa8.42□□□□□ -1.06
TRAF4-214ENST00000580073 LINC01600Q96MT4 127 aa8.42□□□□□ -1.06
TRAF4-214ENST00000580073 SCGB3A1Q96QR1 104 aa8.42□□□□□ -1.06
TRAF4-214ENST00000580073 C5orf38Q86SI9 138 aa8.41□□□□□ -1.06
TRAF4-214ENST00000580073 IGHV3OR16-9A0A0B4J2B5 98 aa8.4□□□□□ -1.06
TRAF4-214ENST00000580073 IGHV1-58A0A0C4DH39 117 aa8.4□□□□□ -1.06
TRAF4-214ENST00000580073 NPSP0C0P6 89 aa8.4□□□□□ -1.06
TRAF4-214ENST00000580073 SPINK6Q6UWN8 80 aa8.4□□□□□ -1.06
TRAF4-214ENST00000580073 TEX43Q6ZNM6 134 aa8.4□□□□□ -1.06
TRAF4-214ENST00000580073 VCX2Q9H322 139 aa8.4□□□□□ -1.06
TRAF4-214ENST00000580073 HIST1H2BKO60814 126 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 SERF1AO75920 110 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 HIST1H2BJP06899 126 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 HIST1H2BOP23527 126 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 G0S2P27469 103 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 HIST1H2BBP33778 126 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 HIST1H2BDP58876 126 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 RAB5BP61020 215 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 HIST1H2BCP62807 126 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 HIST2H2BEQ16778 126 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.39□□□□□ -1.07
TRAF4-214ENST00000580073 FAM19A3Q7Z5A8 133 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 FAM19A2Q8N3H0 131 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 HIST1H2BHQ93079 126 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 CHCHD1Q96BP2 118 aaKnown RBP8.39□□□□□ -1.07
TRAF4-214ENST00000580073 LINC00526Q96FQ7 95 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 CARD19Q96LW7 228 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 HIST1H2BNQ99877 126 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 HIST1H2BMQ99879 126 aa8.39□□□□□ -1.07
TRAF4-214ENST00000580073 A0A0J9YXV3 536 aa8.38□□□□□ -1.07
TRAF4-214ENST00000580073 HBDP02042 147 aa8.38□□□□□ -1.07
TRAF4-214ENST00000580073 Q6ZRP5 223 aa8.38□□□□□ -1.07
TRAF4-214ENST00000580073 BAGE3Q86Y29 109 aa8.38□□□□□ -1.07
TRAF4-214ENST00000580073 CST9LQ9H4G1 147 aa8.38□□□□□ -1.07
TRAF4-214ENST00000580073 A0A096LNI7 61 aa8.37□□□□□ -1.07
TRAF4-214ENST00000580073 ZNF561-AS1K7EIQ3 104 aa8.37□□□□□ -1.07
TRAF4-214ENST00000580073 COX7A2LO14548 114 aa8.37□□□□□ -1.07
TRAF4-214ENST00000580073 Q6ZN92 141 aa8.36□□□□□ -1.07
TRAF4-214ENST00000580073 TNXBP22105 4242 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms