RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 PPBPP02775 128 aa8.58□□□□□ -1.04
GGA3-208ENST00000579743 RPL32P62910 135 aaKnown RBP8.58□□□□□ -1.04
GGA3-208ENST00000579743 LINC01600Q96MT4 127 aa8.58□□□□□ -1.04
GGA3-208ENST00000579743 RPS10P5Q9NQ39 176 aa8.58□□□□□ -1.04
GGA3-208ENST00000579743 SMCO4Q9NRQ5 59 aa8.58□□□□□ -1.04
GGA3-208ENST00000579743 SPANXA1Q9NS26 97 aa8.58□□□□□ -1.04
GGA3-208ENST00000579743 F8WDY8 70 aa8.57□□□□□ -1.04
GGA3-208ENST00000579743 HBBP68871 147 aa8.57□□□□□ -1.04
GGA3-208ENST00000579743 RNASE13Q5GAN3 156 aaKnown RBP8.57□□□□□ -1.04
GGA3-208ENST00000579743 C5orf38Q86SI9 138 aa8.57□□□□□ -1.04
GGA3-208ENST00000579743 OR10D4PQ8NGN7 298 aa8.57□□□□□ -1.04
GGA3-208ENST00000579743 LRP1Q07954 4544 aaKnown RBP8.56□□□□□ -1.04
GGA3-208ENST00000579743 TNFRSF6BO95407 300 aa8.56□□□□□ -1.04
GGA3-208ENST00000579743 RAB5AP20339 215 aa8.56□□□□□ -1.04
GGA3-208ENST00000579743 RPL18AQ02543 176 aaKnown RBP8.56□□□□□ -1.04
GGA3-208ENST00000579743 SPAG11BQ08648 103 aa8.56□□□□□ -1.04
GGA3-208ENST00000579743 Q6ZUT4 128 aa8.56□□□□□ -1.04
GGA3-208ENST00000579743 YPEL4Q96NS1 127 aa8.56□□□□□ -1.04
GGA3-208ENST00000579743 SMIM2Q9BVW6 85 aa8.56□□□□□ -1.04
GGA3-208ENST00000579743 RNF151Q2KHN1 245 aa8.55□□□□□ -1.04
GGA3-208ENST00000579743 IMMP2LQ96T52 175 aa8.55□□□□□ -1.04
GGA3-208ENST00000579743 D6R8Y8 96 aa8.54□□□□□ -1.04
GGA3-208ENST00000579743 MT-ND6P03923 174 aa8.54□□□□□ -1.04
GGA3-208ENST00000579743 MRPL54Q6P161 138 aaKnown RBP8.54□□□□□ -1.04
GGA3-208ENST00000579743 TGIF2-C20orf24A0A0A6YYL0 155 aa8.53□□□□□ -1.04
GGA3-208ENST00000579743 A0A0J9YXV3 536 aa8.53□□□□□ -1.04
GGA3-208ENST00000579743 IFITM10A6NMD0 228 aa8.53□□□□□ -1.04
GGA3-208ENST00000579743 COLCA2A8K830 154 aa8.53□□□□□ -1.04
GGA3-208ENST00000579743 NDUFA1O15239 70 aa8.53□□□□□ -1.04
GGA3-208ENST00000579743 IFI27P40305 119 aaPredicted RBP8.53□□□□□ -1.04
GGA3-208ENST00000579743 MRPS36P82909 103 aaKnown RBP8.53□□□□□ -1.04
GGA3-208ENST00000579743 ORMDL3Q8N138 153 aa8.53□□□□□ -1.04
GGA3-208ENST00000579743 ORAOV1Q8WV07 137 aa8.53□□□□□ -1.04
GGA3-208ENST00000579743 RPL39P62891 51 aaKnown RBP8.52□□□□□ -1.05
GGA3-208ENST00000579743 C9orf116Q5BN46 136 aaPredicted RBP8.52□□□□□ -1.05
GGA3-208ENST00000579743 ATP5L2Q7Z4Y8 100 aa8.52□□□□□ -1.05
GGA3-208ENST00000579743 MRPL35Q9NZE8 188 aaKnown RBP8.52□□□□□ -1.05
GGA3-208ENST00000579743 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.51□□□□□ -1.05
GGA3-208ENST00000579743 CTDSP1Q9GZU7 261 aa8.51□□□□□ -1.05
GGA3-208ENST00000579743 MT-ND4LP03901 98 aa8.5□□□□□ -1.05
GGA3-208ENST00000579743 SRSF9Q13242 221 aaKnown RBP eCLIP8.5□□□□□ -1.05
GGA3-208ENST00000579743 TMEM136Q6ZRR5 245 aa8.5□□□□□ -1.05
GGA3-208ENST00000579743 PRELID3AQ96N28 172 aa8.5□□□□□ -1.05
GGA3-208ENST00000579743 OPRPNQ99935 248 aaPredicted RBP8.5□□□□□ -1.05
GGA3-208ENST00000579743 IGHV3OR16-9A0A0B4J2B5 98 aa8.49□□□□□ -1.05
GGA3-208ENST00000579743 A0A1B0GXF2 115 aa8.49□□□□□ -1.05
GGA3-208ENST00000579743 A0A1W2PNN7 141 aa8.49□□□□□ -1.05
GGA3-208ENST00000579743 NPYP01303 97 aa8.49□□□□□ -1.05
GGA3-208ENST00000579743 LAMTOR2Q9Y2Q5 125 aa8.49□□□□□ -1.05
GGA3-208ENST00000579743 FAT3Q8TDW7 4589 aa8.48□□□□□ -1.05
GGA3-208ENST00000579743 Q6ZN92 141 aa8.48□□□□□ -1.05
GGA3-208ENST00000579743 ANAPC16Q96DE5 110 aa8.48□□□□□ -1.05
GGA3-208ENST00000579743 C2orf88Q9BSF0 95 aa8.48□□□□□ -1.05
GGA3-208ENST00000579743 PSORS1C2Q9UIG4 136 aa8.48□□□□□ -1.05
GGA3-208ENST00000579743 PYGO1Q9Y3Y4 419 aa8.48□□□□□ -1.05
GGA3-208ENST00000579743 LOC105371267A0A1B0GV96 52 aa8.47□□□□□ -1.05
GGA3-208ENST00000579743 C1orf137Q5JT78 98 aa8.47□□□□□ -1.05
GGA3-208ENST00000579743 TEX43Q6ZNM6 134 aa8.47□□□□□ -1.05
GGA3-208ENST00000579743 TMEM141Q96I45 108 aa8.47□□□□□ -1.05
GGA3-208ENST00000579743 MAP1LC3AQ9H492 121 aa8.47□□□□□ -1.05
GGA3-208ENST00000579743 A0A087WZ39 114 aa8.46□□□□□ -1.06
GGA3-208ENST00000579743 KRTAP10-8P60410 259 aa8.46□□□□□ -1.06
GGA3-208ENST00000579743 DIRC1Q969H9 104 aa8.46□□□□□ -1.06
GGA3-208ENST00000579743 PACRGQ96M98 296 aaPredicted RBP8.46□□□□□ -1.06
GGA3-208ENST00000579743 TLX1NBP0CAT3 122 aa8.45□□□□□ -1.06
GGA3-208ENST00000579743 G0S2P27469 103 aa8.45□□□□□ -1.06
GGA3-208ENST00000579743 PHF5AQ7RTV0 110 aaKnown RBP8.45□□□□□ -1.06
GGA3-208ENST00000579743 CYSLTR1Q9Y271 337 aa8.45□□□□□ -1.06
GGA3-208ENST00000579743 HMCN2Q8NDA2 5059 aa8.44□□□□□ -1.06
GGA3-208ENST00000579743 TRBV30A0A0K0K1B3 111 aa8.44□□□□□ -1.06
GGA3-208ENST00000579743 LOC389332A0A1B0GUA5 103 aa8.44□□□□□ -1.06
GGA3-208ENST00000579743 K7EMI3 77 aa8.44□□□□□ -1.06
GGA3-208ENST00000579743 PRSS2P07478 247 aa8.44□□□□□ -1.06
GGA3-208ENST00000579743 GAGE2EQ4V326 116 aa8.44□□□□□ -1.06
GGA3-208ENST00000579743 ORMDL2Q53FV1 153 aa8.44□□□□□ -1.06
GGA3-208ENST00000579743 PAPPA-AS1Q5QFB9 102 aa8.44□□□□□ -1.06
GGA3-208ENST00000579743 UNQ6190/PRO20217Q6UXQ8 127 aa8.44□□□□□ -1.06
GGA3-208ENST00000579743 VCX2Q9H322 139 aa8.44□□□□□ -1.06
GGA3-208ENST00000579743 GAGE2DQ9UEU5 116 aa8.44□□□□□ -1.06
GGA3-208ENST00000579743 IGLV4-3A0A075B6K6 122 aa8.43□□□□□ -1.06
GGA3-208ENST00000579743 PRSS47A8MTI9 375 aa8.43□□□□□ -1.06
GGA3-208ENST00000579743 NPSP0C0P6 89 aa8.43□□□□□ -1.06
GGA3-208ENST00000579743 RAB5BP61020 215 aa8.43□□□□□ -1.06
GGA3-208ENST00000579743 UBE2BP63146 152 aa8.43□□□□□ -1.06
GGA3-208ENST00000579743 LINC00242Q5T6M2 205 aa8.43□□□□□ -1.06
GGA3-208ENST00000579743 LINC01561Q8N1V8 128 aa8.43□□□□□ -1.06
GGA3-208ENST00000579743 PKHD1L1Q86WI1 4243 aa8.43□□□□□ -1.06
GGA3-208ENST00000579743 IGLV7-43P04211 117 aa8.42□□□□□ -1.06
GGA3-208ENST00000579743 S100PP25815 95 aa8.42□□□□□ -1.06
GGA3-208ENST00000579743 CKS1BP61024 79 aa8.42□□□□□ -1.06
GGA3-208ENST00000579743 SEC11AP67812 179 aa8.42□□□□□ -1.06
GGA3-208ENST00000579743 C2orf66Q6UXQ4 117 aa8.42□□□□□ -1.06
GGA3-208ENST00000579743 FAM19A5Q7Z5A7 132 aaPredicted RBP8.42□□□□□ -1.06
GGA3-208ENST00000579743 FAM104AQ969W3 186 aa8.42□□□□□ -1.06
GGA3-208ENST00000579743 C6orf48Q9UBA6 75 aa8.42□□□□□ -1.06
GGA3-208ENST00000579743 NDUFC2-KCTD14E9PQ53 114 aa8.41□□□□□ -1.06
GGA3-208ENST00000579743 ODF1Q14990 250 aa8.41□□□□□ -1.06
GGA3-208ENST00000579743 C10orf25Q5T742 122 aa8.41□□□□□ -1.06
GGA3-208ENST00000579743 Q8N8P6 123 aa8.41□□□□□ -1.06
GGA3-208ENST00000579743 NXT2Q9NPJ8 142 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms