RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.82□□□□□ -1.16
CDK5RAP3-213ENST00000579605 SRP19P09132 144 aaKnown RBP7.82□□□□□ -1.16
CDK5RAP3-213ENST00000579605 SRSF3P84103 164 aaKnown RBP7.82□□□□□ -1.16
CDK5RAP3-213ENST00000579605 SPAG11BQ08648 103 aa7.82□□□□□ -1.16
CDK5RAP3-213ENST00000579605 Q6ZUT4 128 aa7.82□□□□□ -1.16
CDK5RAP3-213ENST00000579605 NAT8BQ9UHF3 227 aa7.82□□□□□ -1.16
CDK5RAP3-213ENST00000579605 MRPL51Q4U2R6 128 aaKnown RBP7.81□□□□□ -1.16
CDK5RAP3-213ENST00000579605 OPRPNQ99935 248 aaPredicted RBP7.81□□□□□ -1.16
CDK5RAP3-213ENST00000579605 TIMM21Q9BVV7 248 aa7.81□□□□□ -1.16
CDK5RAP3-213ENST00000579605 TCAPO15273 167 aa7.8□□□□□ -1.16
CDK5RAP3-213ENST00000579605 TMEM241Q24JQ0 296 aa7.8□□□□□ -1.16
CDK5RAP3-213ENST00000579605 RNF151Q2KHN1 245 aa7.8□□□□□ -1.16
CDK5RAP3-213ENST00000579605 FAM104BQ5XKR9 115 aa7.8□□□□□ -1.16
CDK5RAP3-213ENST00000579605 OR10D4PQ8NGN7 298 aa7.8□□□□□ -1.16
CDK5RAP3-213ENST00000579605 RETNLBQ9BQ08 111 aa7.8□□□□□ -1.16
CDK5RAP3-213ENST00000579605 C20orf78Q9BR46 151 aa7.8□□□□□ -1.16
CDK5RAP3-213ENST00000579605 LINC00862A6NCI5 91 aa7.79□□□□□ -1.16
CDK5RAP3-213ENST00000579605 CKS2P33552 79 aa7.79□□□□□ -1.16
CDK5RAP3-213ENST00000579605 ORAOV1Q8WV07 137 aa7.79□□□□□ -1.16
CDK5RAP3-213ENST00000579605 hCG_2014768A0A024R1R8 64 aa7.78□□□□□ -1.16
CDK5RAP3-213ENST00000579605 F8WDY8 70 aa7.78□□□□□ -1.16
CDK5RAP3-213ENST00000579605 RPL23P62829 140 aaKnown RBP7.78□□□□□ -1.16
CDK5RAP3-213ENST00000579605 RPL39P62891 51 aaKnown RBP7.78□□□□□ -1.16
CDK5RAP3-213ENST00000579605 ADIRFQ15847 76 aa7.78□□□□□ -1.16
CDK5RAP3-213ENST00000579605 FAM74A3Q4VXF1 159 aa7.78□□□□□ -1.16
CDK5RAP3-213ENST00000579605 MRPL35Q9NZE8 188 aaKnown RBP7.78□□□□□ -1.16
CDK5RAP3-213ENST00000579605 TRBV24-1A0A075B6N3 115 aa7.77□□□□□ -1.17
CDK5RAP3-213ENST00000579605 SMIM27A0A1W2PRY6 76 aa7.77□□□□□ -1.17
CDK5RAP3-213ENST00000579605 NDUFA1O15239 70 aa7.77□□□□□ -1.17
CDK5RAP3-213ENST00000579605 RPL32P62910 135 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-213ENST00000579605 IMMP2LQ96T52 175 aa7.77□□□□□ -1.17
CDK5RAP3-213ENST00000579605 CARHSP1Q9Y2V2 147 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-213ENST00000579605 A0A1B0GW15 77 aa7.76□□□□□ -1.17
CDK5RAP3-213ENST00000579605 FAM168BA1KXE4 195 aa7.76□□□□□ -1.17
CDK5RAP3-213ENST00000579605 TNFRSF6BO95407 300 aa7.76□□□□□ -1.17
CDK5RAP3-213ENST00000579605 SPANXA1Q9NS26 97 aa7.76□□□□□ -1.17
CDK5RAP3-213ENST00000579605 NAT8Q9UHE5 227 aa7.76□□□□□ -1.17
CDK5RAP3-213ENST00000579605 IGHV3OR16-9A0A0B4J2B5 98 aa7.75□□□□□ -1.17
CDK5RAP3-213ENST00000579605 IFITM10A6NMD0 228 aa7.75□□□□□ -1.17
CDK5RAP3-213ENST00000579605 F8W036 122 aa7.75□□□□□ -1.17
CDK5RAP3-213ENST00000579605 S100A8P05109 93 aa7.75□□□□□ -1.17
CDK5RAP3-213ENST00000579605 HBBP68871 147 aa7.75□□□□□ -1.17
CDK5RAP3-213ENST00000579605 MRPS36P82909 103 aaKnown RBP7.75□□□□□ -1.17
CDK5RAP3-213ENST00000579605 SMIM2Q9BVW6 85 aa7.75□□□□□ -1.17
CDK5RAP3-213ENST00000579605 D6R8Y8 96 aa7.74□□□□□ -1.17
CDK5RAP3-213ENST00000579605 C10orf25Q5T742 122 aa7.74□□□□□ -1.17
CDK5RAP3-213ENST00000579605 FAM19A5Q7Z5A7 132 aaPredicted RBP7.74□□□□□ -1.17
CDK5RAP3-213ENST00000579605 TGIF2-C20orf24A0A0A6YYL0 155 aa7.73□□□□□ -1.17
CDK5RAP3-213ENST00000579605 NPYP01303 97 aa7.73□□□□□ -1.17
CDK5RAP3-213ENST00000579605 TLX1NBP0CAT3 122 aa7.73□□□□□ -1.17
CDK5RAP3-213ENST00000579605 UBE2BP63146 152 aa7.73□□□□□ -1.17
CDK5RAP3-213ENST00000579605 GAGE2EQ4V326 116 aa7.73□□□□□ -1.17
CDK5RAP3-213ENST00000579605 MRPL54Q6P161 138 aaKnown RBP7.73□□□□□ -1.17
CDK5RAP3-213ENST00000579605 UNQ6190/PRO20217Q6UXQ8 127 aa7.73□□□□□ -1.17
CDK5RAP3-213ENST00000579605 FAM104AQ969W3 186 aa7.73□□□□□ -1.17
CDK5RAP3-213ENST00000579605 C6orf48Q9UBA6 75 aa7.73□□□□□ -1.17
CDK5RAP3-213ENST00000579605 GAGE2DQ9UEU5 116 aa7.73□□□□□ -1.17
CDK5RAP3-213ENST00000579605 C9JQL5 133 aa7.72□□□□□ -1.17
CDK5RAP3-213ENST00000579605 CRYGAP11844 174 aa7.72□□□□□ -1.17
CDK5RAP3-213ENST00000579605 PEA15Q15121 130 aa7.72□□□□□ -1.17
CDK5RAP3-213ENST00000579605 TYMSOSQ8TAI1 123 aa7.72□□□□□ -1.17
CDK5RAP3-213ENST00000579605 IGLV7-46A0A075B6I9 117 aa7.71□□□□□ -1.18
CDK5RAP3-213ENST00000579605 PPBPP02775 128 aa7.71□□□□□ -1.18
CDK5RAP3-213ENST00000579605 RAB5AP20339 215 aa7.71□□□□□ -1.18
CDK5RAP3-213ENST00000579605 IFI27P40305 119 aaPredicted RBP7.71□□□□□ -1.18
CDK5RAP3-213ENST00000579605 TPRXLQ17RH7 258 aa7.71□□□□□ -1.18
CDK5RAP3-213ENST00000579605 SMDT1Q9H4I9 107 aa7.71□□□□□ -1.18
CDK5RAP3-213ENST00000579605 A0A087X002 238 aa7.7□□□□□ -1.18
CDK5RAP3-213ENST00000579605 ORMDL3Q8N138 153 aa7.7□□□□□ -1.18
CDK5RAP3-213ENST00000579605 A0A1B0GXF2 115 aa7.69□□□□□ -1.18
CDK5RAP3-213ENST00000579605 M0QXV9 152 aa7.69□□□□□ -1.18
CDK5RAP3-213ENST00000579605 KIAA0087Q14695 138 aa7.69□□□□□ -1.18
CDK5RAP3-213ENST00000579605 TMEM136Q6ZRR5 245 aa7.69□□□□□ -1.18
CDK5RAP3-213ENST00000579605 PACRGQ96M98 296 aaPredicted RBP7.69□□□□□ -1.18
CDK5RAP3-213ENST00000579605 IGLV4-3A0A075B6K6 122 aa7.68□□□□□ -1.18
CDK5RAP3-213ENST00000579605 KRTAP9-7A8MTY7 169 aa7.68□□□□□ -1.18
CDK5RAP3-213ENST00000579605 LINC00242Q5T6M2 205 aa7.68□□□□□ -1.18
CDK5RAP3-213ENST00000579605 PRELID3AQ96N28 172 aa7.68□□□□□ -1.18
CDK5RAP3-213ENST00000579605 PYGO1Q9Y3Y4 419 aa7.68□□□□□ -1.18
CDK5RAP3-213ENST00000579605 TRBV30A0A0K0K1B3 111 aa7.67□□□□□ -1.18
CDK5RAP3-213ENST00000579605 TEX43Q6ZNM6 134 aa7.67□□□□□ -1.18
CDK5RAP3-213ENST00000579605 TMEM141Q96I45 108 aa7.67□□□□□ -1.18
CDK5RAP3-213ENST00000579605 C2orf88Q9BSF0 95 aa7.67□□□□□ -1.18
CDK5RAP3-213ENST00000579605 LOC389332A0A1B0GUA5 103 aa7.66□□□□□ -1.18
CDK5RAP3-213ENST00000579605 NDUFC2-KCTD14E9PQ53 114 aa7.66□□□□□ -1.18
CDK5RAP3-213ENST00000579605 ZNF861PO60384 105 aa7.66□□□□□ -1.18
CDK5RAP3-213ENST00000579605 C2orf82Q6UX34 121 aa7.66□□□□□ -1.18
CDK5RAP3-213ENST00000579605 LINC00173Q6ZV60 143 aa7.66□□□□□ -1.18
CDK5RAP3-213ENST00000579605 ATP5L2Q7Z4Y8 100 aa7.66□□□□□ -1.18
CDK5RAP3-213ENST00000579605 KRTAP7-1Q8IUC3 87 aa7.66□□□□□ -1.18
CDK5RAP3-213ENST00000579605 PRSS2P07478 247 aa7.65□□□□□ -1.18
CDK5RAP3-213ENST00000579605 Q6ZN92 141 aa7.65□□□□□ -1.18
CDK5RAP3-213ENST00000579605 LINC01561Q8N1V8 128 aa7.65□□□□□ -1.18
CDK5RAP3-213ENST00000579605 KRTAP4-1Q9BYQ7 146 aa7.65□□□□□ -1.18
CDK5RAP3-213ENST00000579605 MAP1LC3AQ9H492 121 aa7.65□□□□□ -1.18
CDK5RAP3-213ENST00000579605 C9orf129Q5T035 196 aaKnown RBP7.64□□□□□ -1.19
CDK5RAP3-213ENST00000579605 ANAPC11Q9NYG5 84 aa7.64□□□□□ -1.19
CDK5RAP3-213ENST00000579605 LAMTOR2Q9Y2Q5 125 aa7.64□□□□□ -1.19
CDK5RAP3-213ENST00000579605 PRSS47A8MTI9 375 aa7.63□□□□□ -1.19
CDK5RAP3-213ENST00000579605 VCX2Q9H322 139 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms