RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 GVQW2A0A096LPI5 108 aaPredicted RBP7.5□□□□□ -1.21
ERBB2-208ENST00000578630 IGHV3OR16-9A0A0B4J2B5 98 aa7.5□□□□□ -1.21
ERBB2-208ENST00000578630 ATP5LO75964 103 aa7.5□□□□□ -1.21
ERBB2-208ENST00000578630 CNBPP62633 177 aaKnown RBP7.5□□□□□ -1.21
ERBB2-208ENST00000578630 LINC00242Q5T6M2 205 aa7.5□□□□□ -1.21
ERBB2-208ENST00000578630 ZC2HC1BQ5TFG8 222 aa7.5□□□□□ -1.21
ERBB2-208ENST00000578630 GEMIN7Q9H840 131 aaKnown RBP7.5□□□□□ -1.21
ERBB2-208ENST00000578630 BIRC6Q9NR09 4857 aa7.5□□□□□ -1.21
ERBB2-208ENST00000578630 HSBP1O75506 76 aa7.49□□□□□ -1.21
ERBB2-208ENST00000578630 PMVKQ15126 192 aa7.49□□□□□ -1.21
ERBB2-208ENST00000578630 A0A087WZ39 114 aa7.48□□□□□ -1.21
ERBB2-208ENST00000578630 SLPIP03973 132 aa7.48□□□□□ -1.21
ERBB2-208ENST00000578630 NDUFA6P56556 154 aa7.48□□□□□ -1.21
ERBB2-208ENST00000578630 HERVK_113P63121 156 aa7.48□□□□□ -1.21
ERBB2-208ENST00000578630 COX6A2Q02221 97 aa7.48□□□□□ -1.21
ERBB2-208ENST00000578630 PMCHL1Q16048 86 aa7.48□□□□□ -1.21
ERBB2-208ENST00000578630 LINC00173Q6ZV60 143 aa7.48□□□□□ -1.21
ERBB2-208ENST00000578630 FAM19A3Q7Z5A8 133 aa7.48□□□□□ -1.21
ERBB2-208ENST00000578630 LINC01561Q8N1V8 128 aa7.48□□□□□ -1.21
ERBB2-208ENST00000578630 CST9LQ9H4G1 147 aa7.48□□□□□ -1.21
ERBB2-208ENST00000578630 DYNC1H1Q14204 4646 aaKnown RBP7.47□□□□□ -1.21
ERBB2-208ENST00000578630 IGHV3-64A0A075B6Q5 118 aa7.47□□□□□ -1.21
ERBB2-208ENST00000578630 F8WDY8 70 aa7.47□□□□□ -1.21
ERBB2-208ENST00000578630 LINC01620Q4KN68 170 aa7.47□□□□□ -1.21
ERBB2-208ENST00000578630 PDZD11Q5EBL8 140 aa7.47□□□□□ -1.21
ERBB2-208ENST00000578630 OR10D4PQ8NGN7 298 aa7.47□□□□□ -1.21
ERBB2-208ENST00000578630 IGLV4-69A0A075B6H9 119 aa7.46□□□□□ -1.22
ERBB2-208ENST00000578630 A0A096LNJ9 63 aa7.46□□□□□ -1.22
ERBB2-208ENST00000578630 TINCRA0A1B0GVN0 87 aa7.46□□□□□ -1.22
ERBB2-208ENST00000578630 ATP6V1G1O75348 118 aa7.46□□□□□ -1.22
ERBB2-208ENST00000578630 SYCNQ0VAF6 134 aa7.46□□□□□ -1.22
ERBB2-208ENST00000578630 ORAOV1Q8WV07 137 aa7.46□□□□□ -1.22
ERBB2-208ENST00000578630 LINC00526Q96FQ7 95 aa7.46□□□□□ -1.22
ERBB2-208ENST00000578630 C2orf48Q96LS8 159 aa7.46□□□□□ -1.22
ERBB2-208ENST00000578630 PKIGQ9Y2B9 76 aa7.46□□□□□ -1.22
ERBB2-208ENST00000578630 A0A0J9YXV3 536 aa7.45□□□□□ -1.22
ERBB2-208ENST00000578630 SPAG11BQ08648 103 aa7.45□□□□□ -1.22
ERBB2-208ENST00000578630 SDIM1Q6ZPB5 146 aa7.45□□□□□ -1.22
ERBB2-208ENST00000578630 DPH3Q96FX2 82 aa7.45□□□□□ -1.22
ERBB2-208ENST00000578630 PACRGQ96M98 296 aaPredicted RBP7.45□□□□□ -1.22
ERBB2-208ENST00000578630 CAMK2N2Q96S95 79 aa7.45□□□□□ -1.22
ERBB2-208ENST00000578630 SERF1AO75920 110 aa7.44□□□□□ -1.22
ERBB2-208ENST00000578630 PRSS2P07478 247 aa7.44□□□□□ -1.22
ERBB2-208ENST00000578630 XGP55808 180 aa7.44□□□□□ -1.22
ERBB2-208ENST00000578630 FAM19A2Q8N3H0 131 aa7.44□□□□□ -1.22
ERBB2-208ENST00000578630 LINC00469Q8N7U9 141 aa7.44□□□□□ -1.22
ERBB2-208ENST00000578630 IFI27L1Q96BM0 104 aa7.44□□□□□ -1.22
ERBB2-208ENST00000578630 CARD19Q96LW7 228 aa7.44□□□□□ -1.22
ERBB2-208ENST00000578630 FAM30AQ9NZY2 134 aa7.44□□□□□ -1.22
ERBB2-208ENST00000578630 LRP1BQ9NZR2 4599 aa7.44□□□□□ -1.22
ERBB2-208ENST00000578630 H3BRM9 83 aa7.43□□□□□ -1.22
ERBB2-208ENST00000578630 NDUFA1O15239 70 aa7.43□□□□□ -1.22
ERBB2-208ENST00000578630 Q6ZSA8 131 aa7.43□□□□□ -1.22
ERBB2-208ENST00000578630 CDKN2A-AS1Q9UH64 79 aa7.43□□□□□ -1.22
ERBB2-208ENST00000578630 DNAH5Q8TE73 4624 aa7.43□□□□□ -1.22
ERBB2-208ENST00000578630 LEPROTL1O95214 131 aa7.42□□□□□ -1.22
ERBB2-208ENST00000578630 C6orf226Q5I0X4 101 aa7.42□□□□□ -1.22
ERBB2-208ENST00000578630 CHAC1Q9BUX1 264 aa7.42□□□□□ -1.22
ERBB2-208ENST00000578630 HIST1H2BKO60814 126 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 HIST1H2BJP06899 126 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 IGLC3P0DOY3 106 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 HIST1H2BOP23527 126 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 HIST1H2BBP33778 126 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 HIST1H2BDP58876 126 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 HIST1H2BCP62807 126 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 HIST2H2BEQ16778 126 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 RNF151Q2KHN1 245 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.41□□□□□ -1.22
ERBB2-208ENST00000578630 Q6ZRU5 148 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 HIST1H2BHQ93079 126 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 HIST1H2BNQ99877 126 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 HIST1H2BMQ99879 126 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 TOMM7Q9P0U1 55 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 LINC00474Q9P2X8 69 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 HSPB8Q9UJY1 196 aa7.41□□□□□ -1.22
ERBB2-208ENST00000578630 CHTOPQ9Y3Y2 248 aaKnown RBP7.41□□□□□ -1.22
ERBB2-208ENST00000578630 IGLV5-45A0A087WSX0 123 aa7.4□□□□□ -1.22
ERBB2-208ENST00000578630 TRAV12-1A0A0B4J245 112 aa7.4□□□□□ -1.22
ERBB2-208ENST00000578630 LOC107984640A0A0U1RRK4 108 aa7.4□□□□□ -1.22
ERBB2-208ENST00000578630 NUPR1O60356 82 aa7.4□□□□□ -1.22
ERBB2-208ENST00000578630 CKS1BP61024 79 aa7.4□□□□□ -1.22
ERBB2-208ENST00000578630 KIAA0087Q14695 138 aa7.4□□□□□ -1.22
ERBB2-208ENST00000578630 MRPL35Q9NZE8 188 aaKnown RBP7.4□□□□□ -1.22
ERBB2-208ENST00000578630 FABP4P15090 132 aa7.39□□□□□ -1.23
ERBB2-208ENST00000578630 LINC00310P59036 64 aa7.39□□□□□ -1.23
ERBB2-208ENST00000578630 UNQ6190/PRO20217Q6UXQ8 127 aa7.39□□□□□ -1.23
ERBB2-208ENST00000578630 Q8IZM0 81 aa7.39□□□□□ -1.23
ERBB2-208ENST00000578630 TMEM170BQ5T4T1 132 aa7.38□□□□□ -1.23
ERBB2-208ENST00000578630 SCXQ7RTU7 201 aa7.38□□□□□ -1.23
ERBB2-208ENST00000578630 CIRBP-AS1Q8TBR5 109 aa7.38□□□□□ -1.23
ERBB2-208ENST00000578630 IGKV2-24A0A0C4DH68 120 aa7.37□□□□□ -1.23
ERBB2-208ENST00000578630 TRBV30A0A0K0K1B3 111 aa7.37□□□□□ -1.23
ERBB2-208ENST00000578630 SMIM1B2RUZ4 78 aa7.37□□□□□ -1.23
ERBB2-208ENST00000578630 FAM229AH3BQW9 127 aa7.37□□□□□ -1.23
ERBB2-208ENST00000578630 SMR3BP02814 79 aaPredicted RBP7.37□□□□□ -1.23
ERBB2-208ENST00000578630 SPINK8P0C7L1 97 aa7.37□□□□□ -1.23
ERBB2-208ENST00000578630 CXCL5P42830 114 aa7.37□□□□□ -1.23
ERBB2-208ENST00000578630 HAMPP81172 84 aa7.37□□□□□ -1.23
ERBB2-208ENST00000578630 GAGE2BQ13066 116 aa7.37□□□□□ -1.23
ERBB2-208ENST00000578630 MAJINQ3KP22 176 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms