RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 MAP1LC3CQ9BXW4 147 aa8.06□□□□□ -1.12
IFT20-207ENST00000578547 GEMIN7Q9H840 131 aaKnown RBP8.06□□□□□ -1.12
IFT20-207ENST00000578547 C5orf38Q86SI9 138 aa8.05□□□□□ -1.12
IFT20-207ENST00000578547 CHTOPQ9Y3Y2 248 aaKnown RBP8.05□□□□□ -1.12
IFT20-207ENST00000578547 C5orf52A6NGY3 159 aa8.04□□□□□ -1.12
IFT20-207ENST00000578547 COX7A2LO14548 114 aa8.04□□□□□ -1.12
IFT20-207ENST00000578547 KRTDAPP60985 99 aa8.04□□□□□ -1.12
IFT20-207ENST00000578547 COX6A2Q02221 97 aa8.04□□□□□ -1.12
IFT20-207ENST00000578547 TNP2Q05952 138 aa8.04□□□□□ -1.12
IFT20-207ENST00000578547 PACRGQ96M98 296 aaPredicted RBP8.04□□□□□ -1.12
IFT20-207ENST00000578547 HIST1H2BLQ99880 126 aa8.04□□□□□ -1.12
IFT20-207ENST00000578547 CHAC1Q9BUX1 264 aa8.04□□□□□ -1.12
IFT20-207ENST00000578547 FRAS1Q86XX4 4008 aa8.04□□□□□ -1.12
IFT20-207ENST00000578547 TRAV12-1A0A0B4J245 112 aa8.03□□□□□ -1.12
IFT20-207ENST00000578547 TINCRA0A1B0GVN0 87 aa8.03□□□□□ -1.12
IFT20-207ENST00000578547 USP17L23D6RBM5 183 aa8.03□□□□□ -1.12
IFT20-207ENST00000578547 MALP21145 153 aa8.03□□□□□ -1.12
IFT20-207ENST00000578547 HERVK_113P63121 156 aa8.03□□□□□ -1.12
IFT20-207ENST00000578547 SEC11AP67812 179 aa8.03□□□□□ -1.12
IFT20-207ENST00000578547 WFDC2Q14508 124 aa8.03□□□□□ -1.12
IFT20-207ENST00000578547 LINC00469Q8N7U9 141 aa8.03□□□□□ -1.12
IFT20-207ENST00000578547 PMCHL2Q9BQD1 86 aa8.03□□□□□ -1.12
IFT20-207ENST00000578547 MRPL35Q9NZE8 188 aaKnown RBP8.03□□□□□ -1.12
IFT20-207ENST00000578547 IGLV4-69A0A075B6H9 119 aa8.02□□□□□ -1.13
IFT20-207ENST00000578547 IGHV3OR16-9A0A0B4J2B5 98 aa8.02□□□□□ -1.13
IFT20-207ENST00000578547 SYS1-DBNDD2H3BUS1 97 aa8.02□□□□□ -1.13
IFT20-207ENST00000578547 C3orf79P0CE67 100 aa8.02□□□□□ -1.13
IFT20-207ENST00000578547 IGLC3P0DOY3 106 aa8.02□□□□□ -1.13
IFT20-207ENST00000578547 ODF1Q14990 250 aa8.02□□□□□ -1.13
IFT20-207ENST00000578547 LINC00336Q6ZUF6 198 aa8.02□□□□□ -1.13
IFT20-207ENST00000578547 FAM19A3Q7Z5A8 133 aa8.02□□□□□ -1.13
IFT20-207ENST00000578547 CDKN2A-AS1Q9UH64 79 aa8.02□□□□□ -1.13
IFT20-207ENST00000578547 A0A087WTM6 91 aa8.01□□□□□ -1.13
IFT20-207ENST00000578547 LRCOL1A6NCL2 159 aa8.01□□□□□ -1.13
IFT20-207ENST00000578547 F8VRH5 84 aa8.01□□□□□ -1.13
IFT20-207ENST00000578547 HIGD2BQ4VC39 106 aa8.01□□□□□ -1.13
IFT20-207ENST00000578547 SPATA12Q7Z6I5 190 aa8.01□□□□□ -1.13
IFT20-207ENST00000578547 C11orf86A6NJI1 115 aa8□□□□□ -1.13
IFT20-207ENST00000578547 C15orf56Q8N910 161 aa8□□□□□ -1.13
IFT20-207ENST00000578547 A0A087WZ39 114 aa7.99□□□□□ -1.13
IFT20-207ENST00000578547 IGHV1-58A0A0C4DH39 117 aa7.99□□□□□ -1.13
IFT20-207ENST00000578547 EREGO14944 169 aa7.99□□□□□ -1.13
IFT20-207ENST00000578547 ZNF22P17026 224 aaPredicted RBP7.99□□□□□ -1.13
IFT20-207ENST00000578547 TMEM170BQ5T4T1 132 aa7.99□□□□□ -1.13
IFT20-207ENST00000578547 CFAP161Q6P656 301 aa7.99□□□□□ -1.13
IFT20-207ENST00000578547 PET117Q6UWS5 81 aa7.99□□□□□ -1.13
IFT20-207ENST00000578547 FAT2Q9NYQ8 4349 aa7.99□□□□□ -1.13
IFT20-207ENST00000578547 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.98□□□□□ -1.13
IFT20-207ENST00000578547 IGLV5-45A0A087WSX0 123 aa7.98□□□□□ -1.13
IFT20-207ENST00000578547 hDV102S1A0JD36 115 aa7.98□□□□□ -1.13
IFT20-207ENST00000578547 C20orf202A1L168 122 aa7.98□□□□□ -1.13
IFT20-207ENST00000578547 H3BRM9 83 aa7.98□□□□□ -1.13
IFT20-207ENST00000578547 DPM2O94777 84 aa7.98□□□□□ -1.13
IFT20-207ENST00000578547 APOMO95445 188 aa7.98□□□□□ -1.13
IFT20-207ENST00000578547 SPINK8P0C7L1 97 aa7.98□□□□□ -1.13
IFT20-207ENST00000578547 PLNP26678 52 aa7.98□□□□□ -1.13
IFT20-207ENST00000578547 C14orf177Q52M58 125 aa7.98□□□□□ -1.13
IFT20-207ENST00000578547 Q8N814 137 aa7.98□□□□□ -1.13
IFT20-207ENST00000578547 ORAOV1Q8WV07 137 aa7.98□□□□□ -1.13
IFT20-207ENST00000578547 IGHV3-64A0A075B6Q5 118 aa7.97□□□□□ -1.13
IFT20-207ENST00000578547 IGKCP01834 107 aa7.97□□□□□ -1.13
IFT20-207ENST00000578547 SPAG11BQ08648 103 aa7.97□□□□□ -1.13
IFT20-207ENST00000578547 LINC01545Q5VT33 79 aa7.97□□□□□ -1.13
IFT20-207ENST00000578547 OR10D4PQ8NGN7 298 aa7.97□□□□□ -1.13
IFT20-207ENST00000578547 LINC00526Q96FQ7 95 aa7.97□□□□□ -1.13
IFT20-207ENST00000578547 GVQW2A0A096LPI5 108 aaPredicted RBP7.96□□□□□ -1.14
IFT20-207ENST00000578547 A0A1B0GVY2 172 aa7.96□□□□□ -1.14
IFT20-207ENST00000578547 SMIM1B2RUZ4 78 aa7.96□□□□□ -1.14
IFT20-207ENST00000578547 ZNF561-AS1K7EIQ3 104 aa7.96□□□□□ -1.14
IFT20-207ENST00000578547 FUSP35637 526 aaKnown RBP eCLIP7.96□□□□□ -1.14
IFT20-207ENST00000578547 TOMM7Q9P0U1 55 aa7.96□□□□□ -1.14
IFT20-207ENST00000578547 LINC01561Q8N1V8 128 aa7.95□□□□□ -1.14
IFT20-207ENST00000578547 DNAH11Q96DT5 4516 aa7.95□□□□□ -1.14
IFT20-207ENST00000578547 PRSS2P07478 247 aa7.94□□□□□ -1.14
IFT20-207ENST00000578547 ATOH7Q8N100 152 aa7.94□□□□□ -1.14
IFT20-207ENST00000578547 PKD1P98161 4303 aa7.93□□□□□ -1.14
IFT20-207ENST00000578547 TMEM223A0PJW6 202 aa7.93□□□□□ -1.14
IFT20-207ENST00000578547 EPPK1P58107 5090 aaKnown RBP7.92□□□□□ -1.14
IFT20-207ENST00000578547 SCGB1D1O95968 90 aa7.92□□□□□ -1.14
IFT20-207ENST00000578547 KRTAP10-2P60368 255 aa7.92□□□□□ -1.14
IFT20-207ENST00000578547 COX7B2Q8TF08 81 aa7.92□□□□□ -1.14
IFT20-207ENST00000578547 CAMK2N2Q96S95 79 aa7.92□□□□□ -1.14
IFT20-207ENST00000578547 IGLV5-52A0A0A0MRZ9 124 aa7.91□□□□□ -1.14
IFT20-207ENST00000578547 IGLV5-39A0A0G2JS06 123 aa7.91□□□□□ -1.14
IFT20-207ENST00000578547 CKS1BP61024 79 aa7.91□□□□□ -1.14
IFT20-207ENST00000578547 HERVK_113P61574 105 aa7.91□□□□□ -1.14
IFT20-207ENST00000578547 C6orf226Q5I0X4 101 aa7.91□□□□□ -1.14
IFT20-207ENST00000578547 C2orf82Q6UX34 121 aa7.91□□□□□ -1.14
IFT20-207ENST00000578547 Q8IZM0 81 aa7.91□□□□□ -1.14
IFT20-207ENST00000578547 SLPIP03973 132 aa7.9□□□□□ -1.14
IFT20-207ENST00000578547 SYCNQ0VAF6 134 aa7.9□□□□□ -1.14
IFT20-207ENST00000578547 KIAA0087Q14695 138 aa7.9□□□□□ -1.14
IFT20-207ENST00000578547 STPG4Q8N801 248 aa7.9□□□□□ -1.14
IFT20-207ENST00000578547 NTN5Q8WTR8 489 aaPredicted RBP7.9□□□□□ -1.14
IFT20-207ENST00000578547 CARD19Q96LW7 228 aa7.9□□□□□ -1.14
IFT20-207ENST00000578547 HECTD4Q9Y4D8 3996 aa7.89□□□□□ -1.15
IFT20-207ENST00000578547 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.89□□□□□ -1.15
IFT20-207ENST00000578547 NDUFA1O15239 70 aa7.89□□□□□ -1.15
IFT20-207ENST00000578547 AKR1D1P51857 326 aa7.89□□□□□ -1.15
IFT20-207ENST00000578547 CNBPP62633 177 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms