RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 HSBP1L1C9JCN9 74 aa9.09□□□□□ -0.95
SRSF1-202ENST00000578430 CRPP02741 224 aa9.09□□□□□ -0.95
SRSF1-202ENST00000578430 S100A12P80511 92 aa9.09□□□□□ -0.95
SRSF1-202ENST00000578430 MIAQ16674 131 aa9.09□□□□□ -0.95
SRSF1-202ENST00000578430 LINC00242Q5T6M2 205 aa9.09□□□□□ -0.95
SRSF1-202ENST00000578430 Q8N3U1 123 aa9.09□□□□□ -0.95
SRSF1-202ENST00000578430 STARD9Q9P2P6 4700 aa9.08□□□□□ -0.96
SRSF1-202ENST00000578430 IGLV5-45A0A087WSX0 123 aa9.08□□□□□ -0.96
SRSF1-202ENST00000578430 LINC00518Q8N0U6 118 aa9.08□□□□□ -0.96
SRSF1-202ENST00000578430 ATOH7Q8N100 152 aa9.08□□□□□ -0.96
SRSF1-202ENST00000578430 VAMP8Q9BV40 100 aa9.08□□□□□ -0.96
SRSF1-202ENST00000578430 DNAH1Q9P2D7 4330 aa9.07□□□□□ -0.96
SRSF1-202ENST00000578430 IGKV3OR2-268A0A0C4DH90 116 aa9.07□□□□□ -0.96
SRSF1-202ENST00000578430 IBA57-AS1B1ANH7 110 aa9.07□□□□□ -0.96
SRSF1-202ENST00000578430 H3BRM9 83 aa9.07□□□□□ -0.96
SRSF1-202ENST00000578430 ZNF22P17026 224 aaPredicted RBP9.07□□□□□ -0.96
SRSF1-202ENST00000578430 HERVK_113P61574 105 aa9.07□□□□□ -0.96
SRSF1-202ENST00000578430 CASC10Q5T4H9 136 aa9.07□□□□□ -0.96
SRSF1-202ENST00000578430 TMEM170BQ5T4T1 132 aa9.07□□□□□ -0.96
SRSF1-202ENST00000578430 ENHOQ6UWT2 76 aa9.07□□□□□ -0.96
SRSF1-202ENST00000578430 C12orf57Q99622 126 aa9.07□□□□□ -0.96
SRSF1-202ENST00000578430 TRAV8-3A0A0A6YYJ7 113 aa9.06□□□□□ -0.96
SRSF1-202ENST00000578430 CLPSL2Q6UWE3 100 aa9.06□□□□□ -0.96
SRSF1-202ENST00000578430 LINC00469Q8N7U9 141 aa9.06□□□□□ -0.96
SRSF1-202ENST00000578430 UBE2WQ96B02 151 aa9.06□□□□□ -0.96
SRSF1-202ENST00000578430 TTC32Q5I0X7 151 aa9.05□□□□□ -0.96
SRSF1-202ENST00000578430 CD164L2Q6UWJ8 174 aa9.05□□□□□ -0.96
SRSF1-202ENST00000578430 LINC01561Q8N1V8 128 aa9.05□□□□□ -0.96
SRSF1-202ENST00000578430 CHCHD10Q8WYQ3 142 aaPredicted RBP9.05□□□□□ -0.96
SRSF1-202ENST00000578430 IGHV3OR16-9A0A0B4J2B5 98 aa9.04□□□□□ -0.96
SRSF1-202ENST00000578430 TMEM223A0PJW6 202 aa9.04□□□□□ -0.96
SRSF1-202ENST00000578430 COX6A2Q02221 97 aa9.04□□□□□ -0.96
SRSF1-202ENST00000578430 CDPF1Q6NVV7 123 aa9.04□□□□□ -0.96
SRSF1-202ENST00000578430 RMI2Q96E14 147 aa9.04□□□□□ -0.96
SRSF1-202ENST00000578430 CDKN2A-AS1Q9UH64 79 aa9.04□□□□□ -0.96
SRSF1-202ENST00000578430 hDV102S1A0JD36 115 aa9.03□□□□□ -0.96
SRSF1-202ENST00000578430 XCL1P47992 114 aa9.03□□□□□ -0.96
SRSF1-202ENST00000578430 STPG4Q8N801 248 aa9.03□□□□□ -0.96
SRSF1-202ENST00000578430 VPS13DQ5THJ4 4388 aa9.02□□□□□ -0.97
SRSF1-202ENST00000578430 A0A087WZ39 114 aa9.02□□□□□ -0.97
SRSF1-202ENST00000578430 E9PLD3 99 aa9.02□□□□□ -0.97
SRSF1-202ENST00000578430 SPATA45Q537H7 98 aa9.02□□□□□ -0.97
SRSF1-202ENST00000578430 C1orf43Q9BWL3 253 aa9.02□□□□□ -0.97
SRSF1-202ENST00000578430 PAM16Q9Y3D7 125 aa9.02□□□□□ -0.97
SRSF1-202ENST00000578430 COX11Q9Y6N1 276 aa9.02□□□□□ -0.97
SRSF1-202ENST00000578430 HYDINQ4G0P3 5121 aa9.02□□□□□ -0.97
SRSF1-202ENST00000578430 COX7A2LO14548 114 aa9.01□□□□□ -0.97
SRSF1-202ENST00000578430 MAJINQ3KP22 176 aa9.01□□□□□ -0.97
SRSF1-202ENST00000578430 ANKRD39Q53RE8 183 aa9.01□□□□□ -0.97
SRSF1-202ENST00000578430 PLEKHB2Q96CS7 222 aa9.01□□□□□ -0.97
SRSF1-202ENST00000578430 IGLV10-54A0A075B6I4 117 aa9□□□□□ -0.97
SRSF1-202ENST00000578430 IGHV1-58A0A0C4DH39 117 aa9□□□□□ -0.97
SRSF1-202ENST00000578430 NBDYA0A0U1RRE5 68 aa9□□□□□ -0.97
SRSF1-202ENST00000578430 GAGE12HA6NDE8 117 aa9□□□□□ -0.97
SRSF1-202ENST00000578430 LEPROTO15243 131 aa9□□□□□ -0.97
SRSF1-202ENST00000578430 FOXI1Q12951 378 aa9□□□□□ -0.97
SRSF1-202ENST00000578430 IGLV5-39A0A0G2JS06 123 aa8.99□□□□□ -0.97
SRSF1-202ENST00000578430 LCE6AA0A183 80 aa8.99□□□□□ -0.97
SRSF1-202ENST00000578430 SMIM1B2RUZ4 78 aa8.99□□□□□ -0.97
SRSF1-202ENST00000578430 KRTAP26-1Q6PEX3 210 aa8.99□□□□□ -0.97
SRSF1-202ENST00000578430 TM2D2Q9BX73 214 aa8.99□□□□□ -0.97
SRSF1-202ENST00000578430 IGKV2D-24A0A075B6R9 120 aa8.98□□□□□ -0.97
SRSF1-202ENST00000578430 APOMO95445 188 aa8.98□□□□□ -0.97
SRSF1-202ENST00000578430 SPINK8P0C7L1 97 aa8.98□□□□□ -0.97
SRSF1-202ENST00000578430 C5orf38Q86SI9 138 aa8.98□□□□□ -0.97
SRSF1-202ENST00000578430 LINC00476Q8WZB0 136 aa8.98□□□□□ -0.97
SRSF1-202ENST00000578430 Q9HAA7 133 aa8.98□□□□□ -0.97
SRSF1-202ENST00000578430 MALP21145 153 aa8.97□□□□□ -0.97
SRSF1-202ENST00000578430 NMUP48645 174 aa8.97□□□□□ -0.97
SRSF1-202ENST00000578430 IGKV2D-26A0A0A0MRZ7 120 aa8.96□□□□□ -0.98
SRSF1-202ENST00000578430 J3QQQ9 107 aa8.96□□□□□ -0.98
SRSF1-202ENST00000578430 COX8AP10176 69 aa8.96□□□□□ -0.98
SRSF1-202ENST00000578430 KRTAP1-5Q9BYS1 174 aa8.96□□□□□ -0.98
SRSF1-202ENST00000578430 IGHV3-64A0A075B6Q5 118 aa8.95□□□□□ -0.98
SRSF1-202ENST00000578430 TSTD3H0UI37 97 aa8.95□□□□□ -0.98
SRSF1-202ENST00000578430 DLEU1O43261 78 aa8.95□□□□□ -0.98
SRSF1-202ENST00000578430 LY6G6CO95867 125 aa8.95□□□□□ -0.98
SRSF1-202ENST00000578430 LGALS3P17931 250 aaKnown RBP8.95□□□□□ -0.98
SRSF1-202ENST00000578430 CFAP161Q6P656 301 aa8.95□□□□□ -0.98
SRSF1-202ENST00000578430 SFTA2Q6UW10 78 aa8.95□□□□□ -0.98
SRSF1-202ENST00000578430 SLC25A34Q6PIV7 304 aa8.94□□□□□ -0.98
SRSF1-202ENST00000578430 Q8IZM0 81 aa8.94□□□□□ -0.98
SRSF1-202ENST00000578430 COX7B2Q8TF08 81 aa8.94□□□□□ -0.98
SRSF1-202ENST00000578430 ALMS1Q8TCU4 4167 aa8.93□□□□□ -0.98
SRSF1-202ENST00000578430 PRSS2P07478 247 aa8.93□□□□□ -0.98
SRSF1-202ENST00000578430 Q6ZR54 194 aa8.93□□□□□ -0.98
SRSF1-202ENST00000578430 BOD1L2Q8IYS8 172 aa8.93□□□□□ -0.98
SRSF1-202ENST00000578430 ORAOV1Q8WV07 137 aa8.93□□□□□ -0.98
SRSF1-202ENST00000578430 C14orf144Q96I85 54 aa8.93□□□□□ -0.98
SRSF1-202ENST00000578430 UQCR10Q9UDW1 63 aa8.93□□□□□ -0.98
SRSF1-202ENST00000578430 MYMXA0A1B0GTQ4 84 aa8.92□□□□□ -0.98
SRSF1-202ENST00000578430 CXCL5P42830 114 aa8.92□□□□□ -0.98
SRSF1-202ENST00000578430 TSPEAR-AS2P59090 65 aa8.92□□□□□ -0.98
SRSF1-202ENST00000578430 PCP2Q8IVA1 136 aa8.92□□□□□ -0.98
SRSF1-202ENST00000578430 ZNF815PA8K554 130 aa8.91□□□□□ -0.98
SRSF1-202ENST00000578430 F8WDY8 70 aa8.91□□□□□ -0.98
SRSF1-202ENST00000578430 C6orf226Q5I0X4 101 aa8.91□□□□□ -0.98
SRSF1-202ENST00000578430 MIEN1Q9BRT3 115 aa8.91□□□□□ -0.98
SRSF1-202ENST00000578430 PRO1933Q9H354 126 aa8.91□□□□□ -0.98
SRSF1-202ENST00000578430 TOMM7Q9P0U1 55 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms