RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 TMEM241Q24JQ0 296 aa2.41□□□□□ -2.02
PTPRM-206ENST00000578093 SPINK6Q6UWN8 80 aa2.41□□□□□ -2.02
PTPRM-206ENST00000578093 COX8CQ7Z4L0 72 aa2.41□□□□□ -2.02
PTPRM-206ENST00000578093 DPH3Q96FX2 82 aa2.41□□□□□ -2.02
PTPRM-206ENST00000578093 DERL1Q9BUN8 251 aa2.41□□□□□ -2.02
PTPRM-206ENST00000578093 TMEM167BQ9NRX6 74 aa2.41□□□□□ -2.02
PTPRM-206ENST00000578093 FSIP2Q5CZC0 6907 aa2.4□□□□□ -2.02
PTPRM-206ENST00000578093 FXYD6-FXYD2A0A087WZ82 144 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.4□□□□□ -2.03
PTPRM-206ENST00000578093 TGIF2-C20orf24A0A0A6YYL0 155 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 IGHV1-24A0A0C4DH33 117 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 A0A1W2PRE2 83 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 H7C1H1 209 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 SNAI2O43623 268 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 CFC1BP0CG36 223 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 CFC1P0CG37 223 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 AKR1C3P42330 323 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 ZNF345Q14585 488 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 FAM162BQ5T6X4 162 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 REG3GQ6UW15 175 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 LINC01551Q86U37 167 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 HIST3H2BBQ8N257 126 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 ZNF664Q8N3J9 261 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 LINC00526Q96FQ7 95 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 RPS10P5Q9NQ39 176 aa2.4□□□□□ -2.03
PTPRM-206ENST00000578093 GVQW2A0A096LPI5 108 aaPredicted RBP2.39□□□□□ -2.03
PTPRM-206ENST00000578093 IGKV3OR2-268A0A0C4DH90 116 aa2.39□□□□□ -2.03
PTPRM-206ENST00000578093 G3V3Q6 166 aa2.39□□□□□ -2.03
PTPRM-206ENST00000578093 M0QY20 66 aa2.39□□□□□ -2.03
PTPRM-206ENST00000578093 BCL2L11O43521 198 aa2.39□□□□□ -2.03
PTPRM-206ENST00000578093 CXorf1O96002 111 aa2.39□□□□□ -2.03
PTPRM-206ENST00000578093 LTAP01374 205 aa2.39□□□□□ -2.03
PTPRM-206ENST00000578093 MGPP08493 103 aa2.39□□□□□ -2.03
PTPRM-206ENST00000578093 GZMBP10144 247 aa2.39□□□□□ -2.03
PTPRM-206ENST00000578093 FABP4P15090 132 aa2.39□□□□□ -2.03
PTPRM-206ENST00000578093 ADCYAP1P18509 176 aa2.39□□□□□ -2.03
PTPRM-206ENST00000578093 RPS10P46783 165 aaKnown RBP2.39□□□□□ -2.03
PTPRM-206ENST00000578093 OCIAD2Q56VL3 154 aa2.39□□□□□ -2.03
PTPRM-206ENST00000578093 KCNRGQ8N5I3 272 aa2.39□□□□□ -2.03
PTPRM-206ENST00000578093 AQP10Q96PS8 301 aa2.39□□□□□ -2.03
PTPRM-206ENST00000578093 LITAFQ99732 161 aa2.39□□□□□ -2.03
PTPRM-206ENST00000578093 MIEN1Q9BRT3 115 aa2.39□□□□□ -2.03
PTPRM-206ENST00000578093 PSMG3Q9BT73 122 aaPredicted RBP2.39□□□□□ -2.03
PTPRM-206ENST00000578093 TRAV8-4A0A0B4J246 113 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 CTXND1A0A1B0GTU2 59 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 A0A1W2PNN7 141 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 C7orf77A4D0Y5 90 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 CCL25O15444 150 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 P01737 135 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 CXCL1P09341 107 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 PET100P0DJ07 73 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 SULT1A2P50226 295 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 UBE2G1P62253 170 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 CYCSP99999 105 aaKnown RBP2.38□□□□□ -2.03
PTPRM-206ENST00000578093 TMEM97Q5BJF2 176 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 RPL7L1Q6DKI1 246 aaKnown RBP2.38□□□□□ -2.03
PTPRM-206ENST00000578093 Q6ZRP5 223 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 KRTAP11-1Q8IUC1 163 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 CHCHD10Q8WYQ3 142 aaPredicted RBP2.38□□□□□ -2.03
PTPRM-206ENST00000578093 FMC1Q96HJ9 113 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 AP1S3Q96PC3 154 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 HIST1H2BLQ99880 126 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 TMEM243Q9BU79 118 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 SMDT1Q9H4I9 107 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 PSORS1C2Q9UIG4 136 aa2.38□□□□□ -2.03
PTPRM-206ENST00000578093 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.37□□□□□ -2.03
PTPRM-206ENST00000578093 IGKV2-29A2NJV5 120 aaPredicted RBP2.37□□□□□ -2.03
PTPRM-206ENST00000578093 MAP1LC3B2A6NCE7 125 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 FAM231BA6NCW3 169 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 HIST1H2BKO60814 126 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 HIST1H2BJP06899 126 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 KRTAP1-4P0C5Y4 121 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 OR5AL1P0C617 328 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 IGLC6P0CF74 106 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 BCL2P10415 239 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 HIST1H2BOP23527 126 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 HIST1H2BBP33778 126 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 HIST1H2BDP58876 126 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 HIST1H2BCP62807 126 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 SERF2P84101 59 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 HIST2H2BEQ16778 126 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.37□□□□□ -2.03
PTPRM-206ENST00000578093 SPANXN1Q5VSR9 72 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 PHF5AQ7RTV0 110 aaKnown RBP2.37□□□□□ -2.03
PTPRM-206ENST00000578093 HIST1H2BHQ93079 126 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 PGLYRP4Q96LB8 373 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 CARD19Q96LW7 228 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 HIST1H2BNQ99877 126 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 HIST1H2BMQ99879 126 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 TPPP3Q9BW30 176 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 MAP1LC3BQ9GZQ8 125 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 CST9LQ9H4G1 147 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 TNFSF18Q9UNG2 199 aa2.37□□□□□ -2.03
PTPRM-206ENST00000578093 TRAV26-2A0A0B4J265 109 aa2.36□□□□□ -2.03
PTPRM-206ENST00000578093 A0A1B0GV50 99 aa2.36□□□□□ -2.03
PTPRM-206ENST00000578093 UBE2L6O14933 153 aa2.36□□□□□ -2.03
PTPRM-206ENST00000578093 XCL1P47992 114 aa2.36□□□□□ -2.03
PTPRM-206ENST00000578093 CACNG7P62955 275 aa2.36□□□□□ -2.03
PTPRM-206ENST00000578093 PRR4Q16378 134 aa2.36□□□□□ -2.03
PTPRM-206ENST00000578093 COX19Q49B96 90 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms