RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 NDUFC2-KCTD14E9PQ53 114 aa9.41□□□□□ -0.9
CTDNEP1-211ENST00000575783 K7EN84 100 aa9.41□□□□□ -0.9
CTDNEP1-211ENST00000575783 KRTAP13-2Q52LG2 175 aa9.41□□□□□ -0.9
CTDNEP1-211ENST00000575783 C22orf24Q9Y442 160 aa9.41□□□□□ -0.9
CTDNEP1-211ENST00000575783 SMKR1H3BMG3 65 aa9.4□□□□□ -0.9
CTDNEP1-211ENST00000575783 C2orf82Q6UX34 121 aa9.4□□□□□ -0.9
CTDNEP1-211ENST00000575783 OCC1Q8TAD7 63 aa9.4□□□□□ -0.9
CTDNEP1-211ENST00000575783 PPDPFQ9H3Y8 114 aa9.4□□□□□ -0.9
CTDNEP1-211ENST00000575783 SMLR1H3BR10 107 aa9.39□□□□□ -0.91
CTDNEP1-211ENST00000575783 RAB4AP20338 218 aa9.39□□□□□ -0.91
CTDNEP1-211ENST00000575783 KIR2DL4Q99706 377 aa9.39□□□□□ -0.91
CTDNEP1-211ENST00000575783 TRBV30A0A0K0K1B3 111 aa9.38□□□□□ -0.91
CTDNEP1-211ENST00000575783 KIAA0087Q14695 138 aa9.38□□□□□ -0.91
CTDNEP1-211ENST00000575783 LBHQ53QV2 105 aaPredicted RBP9.38□□□□□ -0.91
CTDNEP1-211ENST00000575783 LINC00242Q5T6M2 205 aa9.38□□□□□ -0.91
CTDNEP1-211ENST00000575783 TMEM18Q96B42 140 aa9.38□□□□□ -0.91
CTDNEP1-211ENST00000575783 BORCS7Q96B45 105 aa9.38□□□□□ -0.91
CTDNEP1-211ENST00000575783 PACRGQ96M98 296 aaPredicted RBP9.38□□□□□ -0.91
CTDNEP1-211ENST00000575783 TIMM21Q9BVV7 248 aa9.38□□□□□ -0.91
CTDNEP1-211ENST00000575783 GATCO43716 136 aaKnown RBP9.37□□□□□ -0.91
CTDNEP1-211ENST00000575783 BCE1O60756 84 aa9.37□□□□□ -0.91
CTDNEP1-211ENST00000575783 AMN1Q8IY45 258 aa9.37□□□□□ -0.91
CTDNEP1-211ENST00000575783 LINC00469Q8N7U9 141 aa9.37□□□□□ -0.91
CTDNEP1-211ENST00000575783 TMEM191AQ9H0A3 160 aa9.37□□□□□ -0.91
CTDNEP1-211ENST00000575783 A8MWL6 223 aa9.36□□□□□ -0.91
CTDNEP1-211ENST00000575783 SUMO2P61956 95 aaKnown RBP9.36□□□□□ -0.91
CTDNEP1-211ENST00000575783 IFITM10A6NMD0 228 aa9.35□□□□□ -0.91
CTDNEP1-211ENST00000575783 TEX46H3BTG2 121 aa9.35□□□□□ -0.91
CTDNEP1-211ENST00000575783 RPL39P62891 51 aaKnown RBP9.35□□□□□ -0.91
CTDNEP1-211ENST00000575783 FAM104AQ969W3 186 aa9.35□□□□□ -0.91
CTDNEP1-211ENST00000575783 TGIF2-C20orf24A0A0A6YYL0 155 aa9.34□□□□□ -0.91
CTDNEP1-211ENST00000575783 KANTRA0A1W2PQU2 76 aa9.34□□□□□ -0.91
CTDNEP1-211ENST00000575783 ZNF345Q14585 488 aa9.34□□□□□ -0.91
CTDNEP1-211ENST00000575783 LINC00337Q8N6G1 96 aa9.34□□□□□ -0.91
CTDNEP1-211ENST00000575783 KRTAP4-1Q9BYQ7 146 aa9.34□□□□□ -0.91
CTDNEP1-211ENST00000575783 XAGE1AQ9HD64 81 aa9.34□□□□□ -0.91
CTDNEP1-211ENST00000575783 A0A1B0GUT8 65 aa9.33□□□□□ -0.92
CTDNEP1-211ENST00000575783 ZNF727A8MUV8 499 aa9.33□□□□□ -0.92
CTDNEP1-211ENST00000575783 NRACQ8N912 160 aa9.33□□□□□ -0.92
CTDNEP1-211ENST00000575783 IGKV2D-26A0A0A0MRZ7 120 aa9.32□□□□□ -0.92
CTDNEP1-211ENST00000575783 PPP1R17O96001 155 aa9.32□□□□□ -0.92
CTDNEP1-211ENST00000575783 HBBP68871 147 aa9.32□□□□□ -0.92
CTDNEP1-211ENST00000575783 RPL37AP8A6NKH3 93 aa9.31□□□□□ -0.92
CTDNEP1-211ENST00000575783 ASB16-AS1Q495Z4 193 aa9.31□□□□□ -0.92
CTDNEP1-211ENST00000575783 MRPL55Q7Z7F7 128 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-211ENST00000575783 HIGD1CA8MV81 97 aa9.3□□□□□ -0.92
CTDNEP1-211ENST00000575783 FAM229BQ4G0N7 80 aa9.3□□□□□ -0.92
CTDNEP1-211ENST00000575783 SPANXA1Q9NS26 97 aa9.3□□□□□ -0.92
CTDNEP1-211ENST00000575783 PPP1R2P9O14990 202 aa9.29□□□□□ -0.92
CTDNEP1-211ENST00000575783 FAM231DQ6ZW35 169 aa9.29□□□□□ -0.92
CTDNEP1-211ENST00000575783 UBE2AP49459 152 aa9.28□□□□□ -0.92
CTDNEP1-211ENST00000575783 MRPS36P82909 103 aaKnown RBP9.28□□□□□ -0.92
CTDNEP1-211ENST00000575783 CKS1BP61024 79 aa9.27□□□□□ -0.93
CTDNEP1-211ENST00000575783 CT83Q5H943 113 aa9.27□□□□□ -0.93
CTDNEP1-211ENST00000575783 LINC00167Q96N53 147 aa9.27□□□□□ -0.93
CTDNEP1-211ENST00000575783 TP73-AS1Q9UF72 201 aa9.27□□□□□ -0.93
CTDNEP1-211ENST00000575783 GAGE10A6NGK3 116 aa9.26□□□□□ -0.93
CTDNEP1-211ENST00000575783 HMSDA8MTL9 139 aa9.26□□□□□ -0.93
CTDNEP1-211ENST00000575783 PRSS2P07478 247 aa9.26□□□□□ -0.93
CTDNEP1-211ENST00000575783 CTAG1AP78358 180 aa9.26□□□□□ -0.93
CTDNEP1-211ENST00000575783 TOMM7Q9P0U1 55 aa9.26□□□□□ -0.93
CTDNEP1-211ENST00000575783 SEC61BP60468 96 aaKnown RBP9.25□□□□□ -0.93
CTDNEP1-211ENST00000575783 TCAPO15273 167 aa9.24□□□□□ -0.93
CTDNEP1-211ENST00000575783 RIGQ13278 110 aa9.24□□□□□ -0.93
CTDNEP1-211ENST00000575783 KRTAP13-3Q3SY46 172 aa9.24□□□□□ -0.93
CTDNEP1-211ENST00000575783 MRPL51Q4U2R6 128 aaKnown RBP9.24□□□□□ -0.93
CTDNEP1-211ENST00000575783 C6orf226Q5I0X4 101 aa9.24□□□□□ -0.93
CTDNEP1-211ENST00000575783 C20orf78Q9BR46 151 aa9.24□□□□□ -0.93
CTDNEP1-211ENST00000575783 RPL32P62910 135 aaKnown RBP9.23□□□□□ -0.93
CTDNEP1-211ENST00000575783 FP248Q71RG6 208 aaPredicted RBP9.23□□□□□ -0.93
CTDNEP1-211ENST00000575783 KRTAP13-1Q8IUC0 172 aa9.23□□□□□ -0.93
CTDNEP1-211ENST00000575783 TAGLN2P37802 199 aaKnown RBP9.22□□□□□ -0.93
CTDNEP1-211ENST00000575783 CEBPGP53567 150 aa9.22□□□□□ -0.93
CTDNEP1-211ENST00000575783 CKS2P33552 79 aa9.21□□□□□ -0.94
CTDNEP1-211ENST00000575783 TRBV24-1A0A075B6N3 115 aa9.2□□□□□ -0.94
CTDNEP1-211ENST00000575783 TNFRSF6BO95407 300 aa9.2□□□□□ -0.94
CTDNEP1-211ENST00000575783 IFI27P40305 119 aaPredicted RBP9.2□□□□□ -0.94
CTDNEP1-211ENST00000575783 LCE2CQ5TA81 110 aa9.2□□□□□ -0.94
CTDNEP1-211ENST00000575783 FAM104BQ5XKR9 115 aa9.2□□□□□ -0.94
CTDNEP1-211ENST00000575783 C3orf22Q8N5N4 141 aa9.2□□□□□ -0.94
CTDNEP1-211ENST00000575783 ALKBH7Q9BT30 221 aaPredicted RBP9.2□□□□□ -0.94
CTDNEP1-211ENST00000575783 LINC00862A6NCI5 91 aa9.19□□□□□ -0.94
CTDNEP1-211ENST00000575783 Q6ZN92 141 aa9.19□□□□□ -0.94
CTDNEP1-211ENST00000575783 LINC01561Q8N1V8 128 aa9.19□□□□□ -0.94
CTDNEP1-211ENST00000575783 SMIM2Q9BVW6 85 aa9.19□□□□□ -0.94
CTDNEP1-211ENST00000575783 IGLV4-3A0A075B6K6 122 aa9.18□□□□□ -0.94
CTDNEP1-211ENST00000575783 PNRC1Q12796 327 aaPredicted RBP9.18□□□□□ -0.94
CTDNEP1-211ENST00000575783 SPAG11AQ6PDA7 123 aa9.18□□□□□ -0.94
CTDNEP1-211ENST00000575783 PRLHP81277 87 aa9.17□□□□□ -0.94
CTDNEP1-211ENST00000575783 Q8IZM0 81 aa9.17□□□□□ -0.94
CTDNEP1-211ENST00000575783 TMEM141Q96I45 108 aa9.17□□□□□ -0.94
CTDNEP1-211ENST00000575783 TMEM250H0YL14 139 aa9.16□□□□□ -0.94
CTDNEP1-211ENST00000575783 C4orf48Q5BLP8 95 aa9.16□□□□□ -0.94
CTDNEP1-211ENST00000575783 ZC2HC1BQ5TFG8 222 aa9.16□□□□□ -0.94
CTDNEP1-211ENST00000575783 TEX43Q6ZNM6 134 aa9.16□□□□□ -0.94
CTDNEP1-211ENST00000575783 IGKV2-28A0A075B6P5 120 aa9.15□□□□□ -0.94
CTDNEP1-211ENST00000575783 F8VRH5 84 aa9.15□□□□□ -0.94
CTDNEP1-211ENST00000575783 IGKV2D-28P01615 120 aa9.15□□□□□ -0.94
CTDNEP1-211ENST00000575783 RAB5AP20339 215 aa9.15□□□□□ -0.94
CTDNEP1-211ENST00000575783 LINC01551Q86U37 167 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms