RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 DNAH8Q96JB1 4490 aa6.31□□□□□ -1.4
NDE1-210ENST00000574163 EPM2AB3EWF7 344 aa6.3□□□□□ -1.4
NDE1-210ENST00000574163 ZNF561-AS1K7EIQ3 104 aa6.3□□□□□ -1.4
NDE1-210ENST00000574163 FABP9Q0Z7S8 132 aa6.3□□□□□ -1.4
NDE1-210ENST00000574163 CIRBPQ14011 172 aaKnown RBP6.3□□□□□ -1.4
NDE1-210ENST00000574163 HIGD2BQ4VC39 106 aa6.3□□□□□ -1.4
NDE1-210ENST00000574163 PAPPA-AS1Q5QFB9 102 aa6.3□□□□□ -1.4
NDE1-210ENST00000574163 Q6ZN92 141 aa6.3□□□□□ -1.4
NDE1-210ENST00000574163 SCXQ7RTU7 201 aa6.3□□□□□ -1.4
NDE1-210ENST00000574163 TIMM17AQ99595 171 aa6.3□□□□□ -1.4
NDE1-210ENST00000574163 KRTAP17-1Q9BYP8 105 aa6.3□□□□□ -1.4
NDE1-210ENST00000574163 PCLOQ9Y6V0 5065 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 TGIF2-C20orf24A0A0A6YYL0 155 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 IGHV3OR16-9A0A0B4J2B5 98 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 IGIPA6NJ69 53 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 APOMO95445 188 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 SLPIP03973 132 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 MALP21145 153 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 HAMPP81172 84 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 TEX43Q6ZNM6 134 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 SDIM1Q6ZPB5 146 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 OR10D4PQ8NGN7 298 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 PRSS3P2Q8NHM4 247 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 TOMM6Q96B49 74 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 YPEL4Q96NS1 127 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 C2orf88Q9BSF0 95 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 KRTAP4-5Q9BYR2 181 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 VPS13BQ7Z7G8 4022 aa6.29□□□□□ -1.4
NDE1-210ENST00000574163 SRRM2Q9UQ35 2752 aaKnown RBP6.29□□□□□ -1.4
NDE1-210ENST00000574163 Q5VSD8 79 aa6.28□□□□□ -1.4
NDE1-210ENST00000574163 FA2HQ7L5A8 372 aa6.28□□□□□ -1.4
NDE1-210ENST00000574163 CARD19Q96LW7 228 aa6.28□□□□□ -1.4
NDE1-210ENST00000574163 AMELXQ99217 191 aa6.28□□□□□ -1.4
NDE1-210ENST00000574163 OPRPNQ99935 248 aaPredicted RBP6.28□□□□□ -1.4
NDE1-210ENST00000574163 TRAPPC1Q9Y5R8 145 aa6.28□□□□□ -1.4
NDE1-210ENST00000574163 F8WDY8 70 aa6.27□□□□□ -1.41
NDE1-210ENST00000574163 UBE2D1P51668 147 aa6.27□□□□□ -1.41
NDE1-210ENST00000574163 LINC00173Q6ZV60 143 aa6.27□□□□□ -1.41
NDE1-210ENST00000574163 ERASQ7Z444 233 aa6.27□□□□□ -1.41
NDE1-210ENST00000574163 FAM19A3Q7Z5A8 133 aa6.27□□□□□ -1.41
NDE1-210ENST00000574163 LINC01561Q8N1V8 128 aa6.27□□□□□ -1.41
NDE1-210ENST00000574163 CIRBP-AS1Q8TBR5 109 aa6.27□□□□□ -1.41
NDE1-210ENST00000574163 C2orf48Q96LS8 159 aa6.27□□□□□ -1.41
NDE1-210ENST00000574163 SMCO4Q9NRQ5 59 aa6.27□□□□□ -1.41
NDE1-210ENST00000574163 ABCA13Q86UQ4 5058 aa6.26□□□□□ -1.41
NDE1-210ENST00000574163 A0A087WZ39 114 aa6.26□□□□□ -1.41
NDE1-210ENST00000574163 SEC11AP67812 179 aa6.26□□□□□ -1.41
NDE1-210ENST00000574163 SPAG11BQ08648 103 aa6.26□□□□□ -1.41
NDE1-210ENST00000574163 SYCNQ0VAF6 134 aa6.26□□□□□ -1.41
NDE1-210ENST00000574163 LINC00242Q5T6M2 205 aa6.26□□□□□ -1.41
NDE1-210ENST00000574163 C5orf38Q86SI9 138 aa6.26□□□□□ -1.41
NDE1-210ENST00000574163 C18orf32Q8TCD1 76 aa6.26□□□□□ -1.41
NDE1-210ENST00000574163 SPACA4Q8TDM5 124 aa6.26□□□□□ -1.41
NDE1-210ENST00000574163 VCX2Q9H322 139 aa6.26□□□□□ -1.41
NDE1-210ENST00000574163 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.26□□□□□ -1.41
NDE1-210ENST00000574163 IGLV4-69A0A075B6H9 119 aa6.25□□□□□ -1.41
NDE1-210ENST00000574163 SMR3BP02814 79 aaPredicted RBP6.25□□□□□ -1.41
NDE1-210ENST00000574163 PLA2G1BP04054 148 aaKnown RBP6.25□□□□□ -1.41
NDE1-210ENST00000574163 ORAOV1Q8WV07 137 aa6.25□□□□□ -1.41
NDE1-210ENST00000574163 LINC00474Q9P2X8 69 aa6.25□□□□□ -1.41
NDE1-210ENST00000574163 FAT1Q14517 4588 aa6.25□□□□□ -1.41
NDE1-210ENST00000574163 FLG2Q5D862 2391 aaPredicted RBP6.24□□□□□ -1.41
NDE1-210ENST00000574163 PANO1I0J062 215 aa6.24□□□□□ -1.41
NDE1-210ENST00000574163 RAB5BP61020 215 aa6.24□□□□□ -1.41
NDE1-210ENST00000574163 RNF151Q2KHN1 245 aa6.24□□□□□ -1.41
NDE1-210ENST00000574163 CBLN2Q8IUK8 224 aa6.24□□□□□ -1.41
NDE1-210ENST00000574163 SLC7A5P1Q8MH63 180 aa6.24□□□□□ -1.41
NDE1-210ENST00000574163 LINC00526Q96FQ7 95 aa6.24□□□□□ -1.41
NDE1-210ENST00000574163 SCGB3A1Q96QR1 104 aa6.24□□□□□ -1.41
NDE1-210ENST00000574163 CAMK2N2Q96S95 79 aa6.24□□□□□ -1.41
NDE1-210ENST00000574163 PLAC8Q9NZF1 115 aa6.24□□□□□ -1.41
NDE1-210ENST00000574163 DMBT1Q9UGM3 2413 aaPredicted RBP6.24□□□□□ -1.41
NDE1-210ENST00000574163 HERVK_113P63121 156 aa6.23□□□□□ -1.41
NDE1-210ENST00000574163 COX6A2Q02221 97 aa6.23□□□□□ -1.41
NDE1-210ENST00000574163 Q6ZRU5 148 aa6.23□□□□□ -1.41
NDE1-210ENST00000574163 A0A096LNJ9 63 aa6.22□□□□□ -1.41
NDE1-210ENST00000574163 LOC107984640A0A0U1RRK4 108 aa6.22□□□□□ -1.41
NDE1-210ENST00000574163 NDUFA1O15239 70 aa6.22□□□□□ -1.41
NDE1-210ENST00000574163 HBDP02042 147 aa6.22□□□□□ -1.41
NDE1-210ENST00000574163 LINC00614P0C842 121 aa6.22□□□□□ -1.41
NDE1-210ENST00000574163 CHTF8P0CG12 524 aa6.22□□□□□ -1.41
NDE1-210ENST00000574163 MRPL35Q9NZE8 188 aaKnown RBP6.22□□□□□ -1.41
NDE1-210ENST00000574163 PLA2G2DQ9UNK4 145 aa6.22□□□□□ -1.41
NDE1-210ENST00000574163 IGLV5-45A0A087WSX0 123 aa6.21□□□□□ -1.42
NDE1-210ENST00000574163 A0A087WYN8 130 aa6.21□□□□□ -1.42
NDE1-210ENST00000574163 A0A096LNI7 61 aa6.21□□□□□ -1.42
NDE1-210ENST00000574163 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.21□□□□□ -1.42
NDE1-210ENST00000574163 ZC2HC1BQ5TFG8 222 aa6.21□□□□□ -1.42
NDE1-210ENST00000574163 URB1-AS1Q96HZ7 61 aa6.21□□□□□ -1.42
NDE1-210ENST00000574163 GEMIN7Q9H840 131 aaKnown RBP6.21□□□□□ -1.42
NDE1-210ENST00000574163 IGKV2-24A0A0C4DH68 120 aa6.2□□□□□ -1.42
NDE1-210ENST00000574163 TINCRA0A1B0GVN0 87 aa6.2□□□□□ -1.42
NDE1-210ENST00000574163 INAFM2P0DMQ5 153 aa6.2□□□□□ -1.42
NDE1-210ENST00000574163 PTTG1IPP53801 180 aa6.2□□□□□ -1.42
NDE1-210ENST00000574163 KIAA0087Q14695 138 aa6.2□□□□□ -1.42
NDE1-210ENST00000574163 PMVKQ15126 192 aa6.2□□□□□ -1.42
NDE1-210ENST00000574163 CHCHD1Q96BP2 118 aaKnown RBP6.2□□□□□ -1.42
NDE1-210ENST00000574163 CST9LQ9H4G1 147 aa6.2□□□□□ -1.42
NDE1-210ENST00000574163 TRBV30A0A0K0K1B3 111 aa6.19□□□□□ -1.42
NDE1-210ENST00000574163 ATP5LO75964 103 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms