RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 GVQW2A0A096LPI5 108 aaPredicted RBP9.04□□□□□ -0.96
TVP23A-208ENST00000573857 COX6A2Q02221 97 aa9.04□□□□□ -0.96
TVP23A-208ENST00000573857 CBLN2Q8IUK8 224 aa9.04□□□□□ -0.96
TVP23A-208ENST00000573857 OR5A1Q8NGJ0 315 aa9.04□□□□□ -0.96
TVP23A-208ENST00000573857 TIMM21Q9BVV7 248 aa9.04□□□□□ -0.96
TVP23A-208ENST00000573857 LOC389332A0A1B0GUA5 103 aa9.03□□□□□ -0.96
TVP23A-208ENST00000573857 FOXI1Q12951 378 aa9.03□□□□□ -0.96
TVP23A-208ENST00000573857 KIAA1644Q3SXP7 199 aa9.03□□□□□ -0.96
TVP23A-208ENST00000573857 PRSS3P2Q8NHM4 247 aa9.03□□□□□ -0.96
TVP23A-208ENST00000573857 TNXBP22105 4242 aa9.03□□□□□ -0.96
TVP23A-208ENST00000573857 RAB5BP61020 215 aa9.02□□□□□ -0.97
TVP23A-208ENST00000573857 C7orf33Q8WU49 177 aa9.02□□□□□ -0.97
TVP23A-208ENST00000573857 SPANXA1Q9NS26 97 aa9.02□□□□□ -0.97
TVP23A-208ENST00000573857 IGKV2-24A0A0C4DH68 120 aa9.01□□□□□ -0.97
TVP23A-208ENST00000573857 CCL25O15444 150 aa9.01□□□□□ -0.97
TVP23A-208ENST00000573857 NPSP0C0P6 89 aa9.01□□□□□ -0.97
TVP23A-208ENST00000573857 MAJINQ3KP22 176 aa9.01□□□□□ -0.97
TVP23A-208ENST00000573857 IFI27P40305 119 aaPredicted RBP9□□□□□ -0.97
TVP23A-208ENST00000573857 XCL1P47992 114 aa9□□□□□ -0.97
TVP23A-208ENST00000573857 CYSLTR1Q9Y271 337 aa9□□□□□ -0.97
TVP23A-208ENST00000573857 UBE2D4Q9Y2X8 147 aa9□□□□□ -0.97
TVP23A-208ENST00000573857 LINC00959A0A1B0GUT2 108 aa8.99□□□□□ -0.97
TVP23A-208ENST00000573857 FA2HQ7L5A8 372 aa8.99□□□□□ -0.97
TVP23A-208ENST00000573857 ZNF664Q8N3J9 261 aa8.99□□□□□ -0.97
TVP23A-208ENST00000573857 CDC42SE2Q9NRR3 84 aa8.99□□□□□ -0.97
TVP23A-208ENST00000573857 PYGO1Q9Y3Y4 419 aa8.99□□□□□ -0.97
TVP23A-208ENST00000573857 A0A096LNI7 61 aa8.98□□□□□ -0.97
TVP23A-208ENST00000573857 LINC01546A6NGU7 62 aa8.98□□□□□ -0.97
TVP23A-208ENST00000573857 PAPPA-AS1Q5QFB9 102 aa8.98□□□□□ -0.97
TVP23A-208ENST00000573857 STPG4Q8N801 248 aa8.98□□□□□ -0.97
TVP23A-208ENST00000573857 IGHV1-58A0A0C4DH39 117 aa8.97□□□□□ -0.97
TVP23A-208ENST00000573857 COLCA2A8K830 154 aa8.97□□□□□ -0.97
TVP23A-208ENST00000573857 PRR3P79522 188 aaKnown RBP8.97□□□□□ -0.97
TVP23A-208ENST00000573857 MRPS36P82909 103 aaKnown RBP8.97□□□□□ -0.97
TVP23A-208ENST00000573857 LINC00614P0C842 121 aa8.96□□□□□ -0.98
TVP23A-208ENST00000573857 SS18Q15532 418 aa8.96□□□□□ -0.98
TVP23A-208ENST00000573857 C2orf66Q6UXQ4 117 aa8.96□□□□□ -0.98
TVP23A-208ENST00000573857 Q6ZN92 141 aa8.96□□□□□ -0.98
TVP23A-208ENST00000573857 C18orf32Q8TCD1 76 aa8.96□□□□□ -0.98
TVP23A-208ENST00000573857 LINC00526Q96FQ7 95 aa8.96□□□□□ -0.98
TVP23A-208ENST00000573857 CARD19Q96LW7 228 aa8.96□□□□□ -0.98
TVP23A-208ENST00000573857 LINC00474Q9P2X8 69 aa8.96□□□□□ -0.98
TVP23A-208ENST00000573857 PKIGQ9Y2B9 76 aa8.96□□□□□ -0.98
TVP23A-208ENST00000573857 C1orf196B1AJZ1 125 aa8.95□□□□□ -0.98
TVP23A-208ENST00000573857 CD164L2Q6UWJ8 174 aa8.95□□□□□ -0.98
TVP23A-208ENST00000573857 LRP2P98164 4655 aa8.94□□□□□ -0.98
TVP23A-208ENST00000573857 ATP6V1G1O75348 118 aa8.94□□□□□ -0.98
TVP23A-208ENST00000573857 TRGC2P03986 189 aa8.94□□□□□ -0.98
TVP23A-208ENST00000573857 RPL39P62891 51 aaKnown RBP8.94□□□□□ -0.98
TVP23A-208ENST00000573857 TOMM6Q96B49 74 aa8.94□□□□□ -0.98
TVP23A-208ENST00000573857 CHCHD1Q96BP2 118 aaKnown RBP8.94□□□□□ -0.98
TVP23A-208ENST00000573857 TMEM141Q96I45 108 aa8.94□□□□□ -0.98
TVP23A-208ENST00000573857 ERASQ7Z444 233 aa8.93□□□□□ -0.98
TVP23A-208ENST00000573857 TIMM17AQ99595 171 aa8.93□□□□□ -0.98
TVP23A-208ENST00000573857 C2orf88Q9BSF0 95 aa8.93□□□□□ -0.98
TVP23A-208ENST00000573857 ZNF561-AS1K7EIQ3 104 aa8.92□□□□□ -0.98
TVP23A-208ENST00000573857 SYCNQ0VAF6 134 aa8.92□□□□□ -0.98
TVP23A-208ENST00000573857 TEX43Q6ZNM6 134 aa8.92□□□□□ -0.98
TVP23A-208ENST00000573857 LINC01600Q96MT4 127 aa8.92□□□□□ -0.98
TVP23A-208ENST00000573857 VCX2Q9H322 139 aa8.92□□□□□ -0.98
TVP23A-208ENST00000573857 IGIPA6NJ69 53 aa8.91□□□□□ -0.98
TVP23A-208ENST00000573857 BAGE3Q86Y29 109 aa8.91□□□□□ -0.98
TVP23A-208ENST00000573857 SCGB3A1Q96QR1 104 aa8.91□□□□□ -0.98
TVP23A-208ENST00000573857 COX7A2LO14548 114 aa8.9□□□□□ -0.98
TVP23A-208ENST00000573857 SCO1O75880 301 aa8.9□□□□□ -0.98
TVP23A-208ENST00000573857 HBDP02042 147 aa8.9□□□□□ -0.98
TVP23A-208ENST00000573857 MALP21145 153 aa8.9□□□□□ -0.98
TVP23A-208ENST00000573857 SEC11AP67812 179 aa8.9□□□□□ -0.98
TVP23A-208ENST00000573857 Q6ZUT4 128 aa8.9□□□□□ -0.98
TVP23A-208ENST00000573857 IGLV4-69A0A075B6H9 119 aa8.89□□□□□ -0.99
TVP23A-208ENST00000573857 IGLV4-3A0A075B6K6 122 aa8.89□□□□□ -0.99
TVP23A-208ENST00000573857 IFITM10A6NMD0 228 aa8.89□□□□□ -0.99
TVP23A-208ENST00000573857 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.89□□□□□ -0.99
TVP23A-208ENST00000573857 PTTG1IPP53801 180 aa8.89□□□□□ -0.99
TVP23A-208ENST00000573857 TRAV13-1A0A0B4J241 112 aa8.88□□□□□ -0.99
TVP23A-208ENST00000573857 HSBP1O75506 76 aa8.88□□□□□ -0.99
TVP23A-208ENST00000573857 RNASE13Q5GAN3 156 aaKnown RBP8.88□□□□□ -0.99
TVP23A-208ENST00000573857 SPINK6Q6UWN8 80 aa8.88□□□□□ -0.99
TVP23A-208ENST00000573857 A0A0J9YXV3 536 aa8.87□□□□□ -0.99
TVP23A-208ENST00000573857 LOC107984640A0A0U1RRK4 108 aa8.87□□□□□ -0.99
TVP23A-208ENST00000573857 ATP5LO75964 103 aa8.87□□□□□ -0.99
TVP23A-208ENST00000573857 Q6ZRP5 223 aa8.87□□□□□ -0.99
TVP23A-208ENST00000573857 AMELXQ99217 191 aa8.87□□□□□ -0.99
TVP23A-208ENST00000573857 APOMO95445 188 aa8.86□□□□□ -0.99
TVP23A-208ENST00000573857 GAGE2BQ13066 116 aa8.86□□□□□ -0.99
TVP23A-208ENST00000573857 REG3GQ6UW15 175 aa8.86□□□□□ -0.99
TVP23A-208ENST00000573857 FAM104AQ969W3 186 aa8.86□□□□□ -0.99
TVP23A-208ENST00000573857 URB1-AS1Q96HZ7 61 aa8.86□□□□□ -0.99
TVP23A-208ENST00000573857 OPRPNQ99935 248 aaPredicted RBP8.86□□□□□ -0.99
TVP23A-208ENST00000573857 SRSF9Q13242 221 aaKnown RBP eCLIP8.85□□□□□ -0.99
TVP23A-208ENST00000573857 ODF1Q14990 250 aa8.85□□□□□ -0.99
TVP23A-208ENST00000573857 C5orf38Q86SI9 138 aa8.85□□□□□ -0.99
TVP23A-208ENST00000573857 C2orf48Q96LS8 159 aa8.85□□□□□ -0.99
TVP23A-208ENST00000573857 CAMK2N2Q96S95 79 aa8.85□□□□□ -0.99
TVP23A-208ENST00000573857 A0A1W2PNN7 141 aa8.84□□□□□ -0.99
TVP23A-208ENST00000573857 UBE2D1P51668 147 aa8.84□□□□□ -0.99
TVP23A-208ENST00000573857 KRTAP10-8P60410 259 aa8.84□□□□□ -0.99
TVP23A-208ENST00000573857 PMVKQ15126 192 aa8.84□□□□□ -0.99
TVP23A-208ENST00000573857 FAM19A3Q7Z5A8 133 aa8.84□□□□□ -0.99
TVP23A-208ENST00000573857 HERVK_113P63121 156 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 239.9 ms