RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 FAM74A3Q4VXF1 159 aa13.33□□□□□ -0.28
SNF8-216ENST00000573795 PRR26Q8N8Z3 221 aa13.33□□□□□ -0.28
SNF8-216ENST00000573795 SMIM27A0A1W2PRY6 76 aa13.32□□□□□ -0.28
SNF8-216ENST00000573795 LINC00862A6NCI5 91 aa13.32□□□□□ -0.28
SNF8-216ENST00000573795 TLX1NBP0CAT3 122 aa13.31□□□□□ -0.28
SNF8-216ENST00000573795 KRTAP7-1Q8IUC3 87 aa13.31□□□□□ -0.28
SNF8-216ENST00000573795 SMIM2Q9BVW6 85 aa13.31□□□□□ -0.28
SNF8-216ENST00000573795 C6orf48Q9UBA6 75 aa13.31□□□□□ -0.28
SNF8-216ENST00000573795 F8WDY8 70 aa13.3□□□□□ -0.28
SNF8-216ENST00000573795 TNFRSF6BO95407 300 aa13.3□□□□□ -0.28
SNF8-216ENST00000573795 CKS2P33552 79 aa13.3□□□□□ -0.28
SNF8-216ENST00000573795 MRPS36P82909 103 aaKnown RBP13.3□□□□□ -0.28
SNF8-216ENST00000573795 TMEM241Q24JQ0 296 aa13.3□□□□□ -0.28
SNF8-216ENST00000573795 UNQ6190/PRO20217Q6UXQ8 127 aa13.3□□□□□ -0.28
SNF8-216ENST00000573795 DIRC1Q969H9 104 aa13.3□□□□□ -0.28
SNF8-216ENST00000573795 IMMP2LQ96T52 175 aa13.3□□□□□ -0.28
SNF8-216ENST00000573795 SPANXA1Q9NS26 97 aa13.3□□□□□ -0.28
SNF8-216ENST00000573795 C9JQL5 133 aa13.29□□□□□ -0.28
SNF8-216ENST00000573795 NDUFA1O15239 70 aa13.29□□□□□ -0.28
SNF8-216ENST00000573795 A0A087WZ39 114 aa13.28□□□□□ -0.28
SNF8-216ENST00000573795 H0Y9J4 135 aa13.28□□□□□ -0.28
SNF8-216ENST00000573795 ADIRFQ15847 76 aa13.28□□□□□ -0.28
SNF8-216ENST00000573795 hCG_2014768A0A024R1R8 64 aa13.27□□□□□ -0.29
SNF8-216ENST00000573795 D6R8Y8 96 aa13.27□□□□□ -0.29
SNF8-216ENST00000573795 TCAPO15273 167 aa13.27□□□□□ -0.29
SNF8-216ENST00000573795 NPYP01303 97 aa13.27□□□□□ -0.29
SNF8-216ENST00000573795 FAM19A5Q7Z5A7 132 aaPredicted RBP13.27□□□□□ -0.29
SNF8-216ENST00000573795 MUC2Q02817 5179 aa13.26□□□□□ -0.29
SNF8-216ENST00000573795 A0A1B0GW15 77 aa13.26□□□□□ -0.29
SNF8-216ENST00000573795 IFITM10A6NMD0 228 aa13.26□□□□□ -0.29
SNF8-216ENST00000573795 KRTAP1-4P0C5Y4 121 aa13.26□□□□□ -0.29
SNF8-216ENST00000573795 HBBP68871 147 aa13.26□□□□□ -0.29
SNF8-216ENST00000573795 KIAA0087Q14695 138 aa13.26□□□□□ -0.29
SNF8-216ENST00000573795 SMDT1Q9H4I9 107 aa13.26□□□□□ -0.29
SNF8-216ENST00000573795 NAT8Q9UHE5 227 aa13.25□□□□□ -0.29
SNF8-216ENST00000573795 A0A1B0GXF2 115 aa13.24□□□□□ -0.29
SNF8-216ENST00000573795 GAGE2EQ4V326 116 aa13.24□□□□□ -0.29
SNF8-216ENST00000573795 GAGE2DQ9UEU5 116 aa13.24□□□□□ -0.29
SNF8-216ENST00000573795 SRSF3P84103 164 aaKnown RBP13.23□□□□□ -0.29
SNF8-216ENST00000573795 MRPL54Q6P161 138 aaKnown RBP13.23□□□□□ -0.29
SNF8-216ENST00000573795 LINC00242Q5T6M2 205 aa13.21□□□□□ -0.29
SNF8-216ENST00000573795 IGLV1-50A0A075B6I6 118 aa13.2□□□□□ -0.3
SNF8-216ENST00000573795 IGLV4-3A0A075B6K6 122 aa13.2□□□□□ -0.3
SNF8-216ENST00000573795 TGIF2-C20orf24A0A0A6YYL0 155 aa13.2□□□□□ -0.3
SNF8-216ENST00000573795 M0QXV9 152 aa13.2□□□□□ -0.3
SNF8-216ENST00000573795 C9orf129Q5T035 196 aaKnown RBP13.19□□□□□ -0.3
SNF8-216ENST00000573795 C2orf82Q6UX34 121 aa13.19□□□□□ -0.3
SNF8-216ENST00000573795 F8W036 122 aa13.18□□□□□ -0.3
SNF8-216ENST00000573795 PYGO1Q9Y3Y4 419 aa13.18□□□□□ -0.3
SNF8-216ENST00000573795 TRBV30A0A0K0K1B3 111 aa13.17□□□□□ -0.3
SNF8-216ENST00000573795 PPBPP02775 128 aa13.17□□□□□ -0.3
SNF8-216ENST00000573795 S100A8P05109 93 aa13.17□□□□□ -0.3
SNF8-216ENST00000573795 IFI27P40305 119 aaPredicted RBP13.17□□□□□ -0.3
SNF8-216ENST00000573795 NDUFC2-KCTD14E9PQ53 114 aa13.16□□□□□ -0.3
SNF8-216ENST00000573795 UBE2BP63146 152 aa13.16□□□□□ -0.3
SNF8-216ENST00000573795 ORMDL3Q8N138 153 aa13.15□□□□□ -0.3
SNF8-216ENST00000573795 UBE2D1P51668 147 aa13.14□□□□□ -0.31
SNF8-216ENST00000573795 TMEM141Q96I45 108 aa13.14□□□□□ -0.31
SNF8-216ENST00000573795 PRELID3AQ96N28 172 aa13.14□□□□□ -0.31
SNF8-216ENST00000573795 RAB5AP20339 215 aa13.13□□□□□ -0.31
SNF8-216ENST00000573795 ZC2HC1BQ5TFG8 222 aa13.13□□□□□ -0.31
SNF8-216ENST00000573795 TMEM136Q6ZRR5 245 aa13.13□□□□□ -0.31
SNF8-216ENST00000573795 PEA15Q15121 130 aa13.12□□□□□ -0.31
SNF8-216ENST00000573795 LINC00173Q6ZV60 143 aa13.12□□□□□ -0.31
SNF8-216ENST00000573795 LINC01561Q8N1V8 128 aa13.12□□□□□ -0.31
SNF8-216ENST00000573795 PRSS47A8MTI9 375 aa13.11□□□□□ -0.31
SNF8-216ENST00000573795 TEX43Q6ZNM6 134 aa13.1□□□□□ -0.31
SNF8-216ENST00000573795 ATP5L2Q7Z4Y8 100 aa13.1□□□□□ -0.31
SNF8-216ENST00000573795 PACRGQ96M98 296 aaPredicted RBP13.1□□□□□ -0.31
SNF8-216ENST00000573795 RPL13AP40429 203 aaKnown RBP13.08□□□□□ -0.32
SNF8-216ENST00000573795 AMELXQ99217 191 aa13.08□□□□□ -0.32
SNF8-216ENST00000573795 LOC389332A0A1B0GUA5 103 aa13.07□□□□□ -0.32
SNF8-216ENST00000573795 PRR4Q16378 134 aa13.07□□□□□ -0.32
SNF8-216ENST00000573795 ZNF861PO60384 105 aa13.06□□□□□ -0.32
SNF8-216ENST00000573795 C2orf66Q6UXQ4 117 aa13.06□□□□□ -0.32
SNF8-216ENST00000573795 LINC00469Q8N7U9 141 aa13.06□□□□□ -0.32
SNF8-216ENST00000573795 CARHSP1Q9Y2V2 147 aaKnown RBP13.06□□□□□ -0.32
SNF8-216ENST00000573795 C2orf88Q9BSF0 95 aa13.05□□□□□ -0.32
SNF8-216ENST00000573795 C22orf24Q9Y442 160 aa13.05□□□□□ -0.32
SNF8-216ENST00000573795 Q6ZN92 141 aa13.04□□□□□ -0.32
SNF8-216ENST00000573795 FAM19A3Q7Z5A8 133 aa13.04□□□□□ -0.32
SNF8-216ENST00000573795 Q8N8P6 123 aa13.04□□□□□ -0.32
SNF8-216ENST00000573795 MAP1LC3AQ9H492 121 aa13.04□□□□□ -0.32
SNF8-216ENST00000573795 TOMM7Q9P0U1 55 aa13.04□□□□□ -0.32
SNF8-216ENST00000573795 CYSLTR1Q9Y271 337 aa13.04□□□□□ -0.32
SNF8-216ENST00000573795 LAMTOR2Q9Y2Q5 125 aa13.04□□□□□ -0.32
SNF8-216ENST00000573795 A0A1B0GVG6 124 aa13.03□□□□□ -0.32
SNF8-216ENST00000573795 Q8IZM0 81 aa13.03□□□□□ -0.32
SNF8-216ENST00000573795 XAGE1AQ9HD64 81 aa13.03□□□□□ -0.32
SNF8-216ENST00000573795 IGIPA6NJ69 53 aa13.02□□□□□ -0.33
SNF8-216ENST00000573795 PRSS2P07478 247 aa13.02□□□□□ -0.33
SNF8-216ENST00000573795 NUPR1O60356 82 aa13.01□□□□□ -0.33
SNF8-216ENST00000573795 CKS1BP61024 79 aa13.01□□□□□ -0.33
SNF8-216ENST00000573795 VCX2Q9H322 139 aa13.01□□□□□ -0.33
SNF8-216ENST00000573795 CTDSP1Q9GZU7 261 aa13□□□□□ -0.33
SNF8-216ENST00000573795 NPSP0C0P6 89 aa12.99□□□□□ -0.33
SNF8-216ENST00000573795 C6orf226Q5I0X4 101 aa12.99□□□□□ -0.33
SNF8-216ENST00000573795 ALKBH7Q9BT30 221 aaPredicted RBP12.99□□□□□ -0.33
SNF8-216ENST00000573795 CDKN2A-AS1Q9UH64 79 aa12.99□□□□□ -0.33
SNF8-216ENST00000573795 A0A087X002 238 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms