RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 A0A096LNI7 61 aa10.21□□□□□ -0.77
NDE1-205ENST00000572756 K7EMI3 77 aa10.21□□□□□ -0.77
NDE1-205ENST00000572756 HERC1Q15751 4861 aa10.21□□□□□ -0.78
NDE1-205ENST00000572756 KIAA1644Q3SXP7 199 aa10.2□□□□□ -0.78
NDE1-205ENST00000572756 ORMDL2Q53FV1 153 aa10.2□□□□□ -0.78
NDE1-205ENST00000572756 C2orf66Q6UXQ4 117 aa10.2□□□□□ -0.78
NDE1-205ENST00000572756 DPH3Q96FX2 82 aa10.2□□□□□ -0.78
NDE1-205ENST00000572756 TMEM141Q96I45 108 aa10.2□□□□□ -0.78
NDE1-205ENST00000572756 NXT2Q9NPJ8 142 aaKnown RBP10.2□□□□□ -0.78
NDE1-205ENST00000572756 CYSLTR1Q9Y271 337 aa10.2□□□□□ -0.78
NDE1-205ENST00000572756 IGKV2-24A0A0C4DH68 120 aa10.19□□□□□ -0.78
NDE1-205ENST00000572756 APOMO95445 188 aa10.19□□□□□ -0.78
NDE1-205ENST00000572756 S100PP25815 95 aa10.19□□□□□ -0.78
NDE1-205ENST00000572756 RHEBQ15382 184 aa10.19□□□□□ -0.78
NDE1-205ENST00000572756 MAJINQ3KP22 176 aa10.19□□□□□ -0.78
NDE1-205ENST00000572756 Q6ZRU5 148 aa10.19□□□□□ -0.78
NDE1-205ENST00000572756 C2orf48Q96LS8 159 aa10.19□□□□□ -0.78
NDE1-205ENST00000572756 GNB1LQ9BYB4 327 aa10.19□□□□□ -0.78
NDE1-205ENST00000572756 PKIGQ9Y2B9 76 aa10.19□□□□□ -0.78
NDE1-205ENST00000572756 KRTAP29-1A8MX34 341 aaPredicted RBP10.18□□□□□ -0.78
NDE1-205ENST00000572756 OR10D4PQ8NGN7 298 aa10.18□□□□□ -0.78
NDE1-205ENST00000572756 LRP1Q07954 4544 aaKnown RBP10.17□□□□□ -0.78
NDE1-205ENST00000572756 IGIPA6NJ69 53 aa10.17□□□□□ -0.78
NDE1-205ENST00000572756 NPSP0C0P6 89 aa10.17□□□□□ -0.78
NDE1-205ENST00000572756 HNRNPA3P51991 378 aaKnown RBP10.17□□□□□ -0.78
NDE1-205ENST00000572756 SPAG11BQ08648 103 aa10.17□□□□□ -0.78
NDE1-205ENST00000572756 LINC00242Q5T6M2 205 aa10.17□□□□□ -0.78
NDE1-205ENST00000572756 LINC00173Q6ZV60 143 aa10.17□□□□□ -0.78
NDE1-205ENST00000572756 STPG4Q8N801 248 aa10.17□□□□□ -0.78
NDE1-205ENST00000572756 CAMK2N2Q96S95 79 aa10.17□□□□□ -0.78
NDE1-205ENST00000572756 AMELXQ99217 191 aa10.17□□□□□ -0.78
NDE1-205ENST00000572756 LINC00474Q9P2X8 69 aa10.17□□□□□ -0.78
NDE1-205ENST00000572756 UBE2D1P51668 147 aa10.16□□□□□ -0.78
NDE1-205ENST00000572756 TEX43Q6ZNM6 134 aa10.16□□□□□ -0.78
NDE1-205ENST00000572756 A0A087WZ39 114 aa10.15□□□□□ -0.78
NDE1-205ENST00000572756 COX19Q49B96 90 aa10.15□□□□□ -0.78
NDE1-205ENST00000572756 ZC2HC1BQ5TFG8 222 aa10.15□□□□□ -0.78
NDE1-205ENST00000572756 ORAOV1Q8WV07 137 aa10.15□□□□□ -0.78
NDE1-205ENST00000572756 ALKBH7Q9BT30 221 aaPredicted RBP10.15□□□□□ -0.78
NDE1-205ENST00000572756 RPS10P5Q9NQ39 176 aa10.15□□□□□ -0.78
NDE1-205ENST00000572756 FAT3Q8TDW7 4589 aa10.15□□□□□ -0.79
NDE1-205ENST00000572756 TGIF2-C20orf24A0A0A6YYL0 155 aa10.14□□□□□ -0.79
NDE1-205ENST00000572756 LOC107984640A0A0U1RRK4 108 aa10.14□□□□□ -0.79
NDE1-205ENST00000572756 LINC01546A6NGU7 62 aa10.14□□□□□ -0.79
NDE1-205ENST00000572756 PTTG1IPP53801 180 aa10.14□□□□□ -0.79
NDE1-205ENST00000572756 RNF151Q2KHN1 245 aa10.14□□□□□ -0.79
NDE1-205ENST00000572756 F8WDY8 70 aa10.13□□□□□ -0.79
NDE1-205ENST00000572756 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.13□□□□□ -0.79
NDE1-205ENST00000572756 MT-ND6P03923 174 aa10.13□□□□□ -0.79
NDE1-205ENST00000572756 Q6ZN92 141 aa10.13□□□□□ -0.79
NDE1-205ENST00000572756 TOMM6Q96B49 74 aa10.13□□□□□ -0.79
NDE1-205ENST00000572756 C2orf88Q9BSF0 95 aa10.13□□□□□ -0.79
NDE1-205ENST00000572756 VCX2Q9H322 139 aa10.13□□□□□ -0.79
NDE1-205ENST00000572756 G0S2P27469 103 aa10.12□□□□□ -0.79
NDE1-205ENST00000572756 KIAA0087Q14695 138 aa10.12□□□□□ -0.79
NDE1-205ENST00000572756 FAM19A3Q7Z5A8 133 aa10.12□□□□□ -0.79
NDE1-205ENST00000572756 TIMM17AQ99595 171 aa10.12□□□□□ -0.79
NDE1-205ENST00000572756 MRPL18Q9H0U6 180 aaKnown RBP10.12□□□□□ -0.79
NDE1-205ENST00000572756 MRPL35Q9NZE8 188 aaKnown RBP10.12□□□□□ -0.79
NDE1-205ENST00000572756 J3QL48 77 aa10.11□□□□□ -0.79
NDE1-205ENST00000572756 LINC01561Q8N1V8 128 aa10.11□□□□□ -0.79
NDE1-205ENST00000572756 C7orf33Q8WU49 177 aa10.11□□□□□ -0.79
NDE1-205ENST00000572756 A0A0J9YXV3 536 aa10.1□□□□□ -0.79
NDE1-205ENST00000572756 NDUFA1O15239 70 aa10.1□□□□□ -0.79
NDE1-205ENST00000572756 OXTP01178 125 aa10.1□□□□□ -0.79
NDE1-205ENST00000572756 GAGE2BQ13066 116 aa10.1□□□□□ -0.79
NDE1-205ENST00000572756 C10orf25Q5T742 122 aa10.1□□□□□ -0.79
NDE1-205ENST00000572756 APOC3P02656 99 aa10.09□□□□□ -0.79
NDE1-205ENST00000572756 FABP9Q0Z7S8 132 aa10.09□□□□□ -0.79
NDE1-205ENST00000572756 PAPPA-AS1Q5QFB9 102 aa10.09□□□□□ -0.79
NDE1-205ENST00000572756 UNQ6190/PRO20217Q6UXQ8 127 aa10.09□□□□□ -0.79
NDE1-205ENST00000572756 ERASQ7Z444 233 aa10.09□□□□□ -0.79
NDE1-205ENST00000572756 C6orf48Q9UBA6 75 aa10.08□□□□□ -0.8
NDE1-205ENST00000572756 A0A1W2PNN7 141 aa10.07□□□□□ -0.8
NDE1-205ENST00000572756 TLX1NBP0CAT3 122 aa10.07□□□□□ -0.8
NDE1-205ENST00000572756 PRR3P79522 188 aaKnown RBP10.07□□□□□ -0.8
NDE1-205ENST00000572756 RPL18AQ02543 176 aaKnown RBP10.07□□□□□ -0.8
NDE1-205ENST00000572756 SVBPQ8N300 66 aa10.07□□□□□ -0.8
NDE1-205ENST00000572756 SCGB3A1Q96QR1 104 aa10.07□□□□□ -0.8
NDE1-205ENST00000572756 LINC01549A6NIU2 74 aa10.06□□□□□ -0.8
NDE1-205ENST00000572756 SNAPINO95295 136 aa10.06□□□□□ -0.8
NDE1-205ENST00000572756 HERVK_113P63121 156 aa10.05□□□□□ -0.8
NDE1-205ENST00000572756 SEC11AP67812 179 aa10.05□□□□□ -0.8
NDE1-205ENST00000572756 NDUFA5Q16718 116 aa10.05□□□□□ -0.8
NDE1-205ENST00000572756 FA2HQ7L5A8 372 aa10.05□□□□□ -0.8
NDE1-205ENST00000572756 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
NDE1-205ENST00000572756 C2orf82Q6UX34 121 aa10.04□□□□□ -0.8
NDE1-205ENST00000572756 Q6ZRP5 223 aa10.04□□□□□ -0.8
NDE1-205ENST00000572756 CDKN2A-AS1Q9UH64 79 aa10.04□□□□□ -0.8
NDE1-205ENST00000572756 TRAPPC1Q9Y5R8 145 aa10.04□□□□□ -0.8
NDE1-205ENST00000572756 TRBV30A0A0K0K1B3 111 aa10.03□□□□□ -0.8
NDE1-205ENST00000572756 C18orf32Q8TCD1 76 aa10.03□□□□□ -0.8
NDE1-205ENST00000572756 URB1-AS1Q96HZ7 61 aa10.03□□□□□ -0.8
NDE1-205ENST00000572756 YPEL4Q96NS1 127 aa10.03□□□□□ -0.8
NDE1-205ENST00000572756 A0A096LNJ9 63 aa10.02□□□□□ -0.81
NDE1-205ENST00000572756 Q8IZM0 81 aa10.02□□□□□ -0.81
NDE1-205ENST00000572756 GEMIN7Q9H840 131 aaKnown RBP10.02□□□□□ -0.81
NDE1-205ENST00000572756 SMCO4Q9NRQ5 59 aa10.02□□□□□ -0.81
NDE1-205ENST00000572756 TINCRA0A1B0GVN0 87 aa10.01□□□□□ -0.81
NDE1-205ENST00000572756 CST9LQ9H4G1 147 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms