RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 UBE2D1P51668 147 aa6.28□□□□□ -1.4
NPLOC4-208ENST00000572351 SEC11AP67812 179 aa6.28□□□□□ -1.4
NPLOC4-208ENST00000572351 LINC00173Q6ZV60 143 aa6.28□□□□□ -1.4
NPLOC4-208ENST00000572351 GEMIN7Q9H840 131 aaKnown RBP6.28□□□□□ -1.4
NPLOC4-208ENST00000572351 COX7A2LO14548 114 aa6.27□□□□□ -1.41
NPLOC4-208ENST00000572351 LECT2O14960 151 aa6.27□□□□□ -1.41
NPLOC4-208ENST00000572351 FOXI1Q12951 378 aa6.27□□□□□ -1.41
NPLOC4-208ENST00000572351 LINC00242Q5T6M2 205 aa6.27□□□□□ -1.41
NPLOC4-208ENST00000572351 MAP1LC3CQ9BXW4 147 aa6.27□□□□□ -1.41
NPLOC4-208ENST00000572351 DNAH6Q9C0G6 4158 aa6.27□□□□□ -1.41
NPLOC4-208ENST00000572351 DNAH2Q9P225 4427 aa6.26□□□□□ -1.41
NPLOC4-208ENST00000572351 A0A087WTM6 91 aa6.26□□□□□ -1.41
NPLOC4-208ENST00000572351 A0A0J9YXV3 536 aa6.26□□□□□ -1.41
NPLOC4-208ENST00000572351 HERVK_113P63121 156 aa6.26□□□□□ -1.41
NPLOC4-208ENST00000572351 C14orf177Q52M58 125 aa6.26□□□□□ -1.41
NPLOC4-208ENST00000572351 CFAP161Q6P656 301 aa6.26□□□□□ -1.41
NPLOC4-208ENST00000572351 KRTAP26-1Q6PEX3 210 aa6.26□□□□□ -1.41
NPLOC4-208ENST00000572351 C5orf38Q86SI9 138 aa6.26□□□□□ -1.41
NPLOC4-208ENST00000572351 MAPKAPK5-AS1Q8N8E1 139 aa6.26□□□□□ -1.41
NPLOC4-208ENST00000572351 CHTOPQ9Y3Y2 248 aaKnown RBP6.26□□□□□ -1.41
NPLOC4-208ENST00000572351 KMT2AQ03164 3969 aa6.25□□□□□ -1.41
NPLOC4-208ENST00000572351 USP17L23D6RBM5 183 aa6.25□□□□□ -1.41
NPLOC4-208ENST00000572351 APOMO95445 188 aa6.25□□□□□ -1.41
NPLOC4-208ENST00000572351 LINC00469Q8N7U9 141 aa6.25□□□□□ -1.41
NPLOC4-208ENST00000572351 PACRGQ96M98 296 aaPredicted RBP6.25□□□□□ -1.41
NPLOC4-208ENST00000572351 CHAC1Q9BUX1 264 aa6.25□□□□□ -1.41
NPLOC4-208ENST00000572351 TMA7Q9Y2S6 64 aaKnown RBP6.25□□□□□ -1.41
NPLOC4-208ENST00000572351 RYR3Q15413 4870 aa6.25□□□□□ -1.41
NPLOC4-208ENST00000572351 TRAV12-1A0A0B4J245 112 aa6.24□□□□□ -1.41
NPLOC4-208ENST00000572351 IGHV3OR16-9A0A0B4J2B5 98 aa6.24□□□□□ -1.41
NPLOC4-208ENST00000572351 IGHV1-58A0A0C4DH39 117 aa6.24□□□□□ -1.41
NPLOC4-208ENST00000572351 TINCRA0A1B0GVN0 87 aa6.24□□□□□ -1.41
NPLOC4-208ENST00000572351 LRCOL1A6NCL2 159 aa6.24□□□□□ -1.41
NPLOC4-208ENST00000572351 SNRPEP62304 92 aaKnown RBP6.24□□□□□ -1.41
NPLOC4-208ENST00000572351 COX6A2Q02221 97 aa6.24□□□□□ -1.41
NPLOC4-208ENST00000572351 Q8N814 137 aa6.24□□□□□ -1.41
NPLOC4-208ENST00000572351 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.23□□□□□ -1.41
NPLOC4-208ENST00000572351 hDV102S1A0JD36 115 aa6.23□□□□□ -1.41
NPLOC4-208ENST00000572351 F8VRH5 84 aa6.23□□□□□ -1.41
NPLOC4-208ENST00000572351 H3BRM9 83 aa6.23□□□□□ -1.41
NPLOC4-208ENST00000572351 IGLC3P0DOY3 106 aa6.23□□□□□ -1.41
NPLOC4-208ENST00000572351 KRTDAPP60985 99 aa6.23□□□□□ -1.41
NPLOC4-208ENST00000572351 WFDC2Q14508 124 aa6.23□□□□□ -1.41
NPLOC4-208ENST00000572351 HIGD2BQ4VC39 106 aa6.23□□□□□ -1.41
NPLOC4-208ENST00000572351 FAM19A3Q7Z5A8 133 aa6.23□□□□□ -1.41
NPLOC4-208ENST00000572351 HIST3H2BBQ8N257 126 aa6.23□□□□□ -1.41
NPLOC4-208ENST00000572351 A0A087WZ39 114 aa6.22□□□□□ -1.41
NPLOC4-208ENST00000572351 SYS1-DBNDD2H3BUS1 97 aa6.22□□□□□ -1.41
NPLOC4-208ENST00000572351 ZNF561-AS1K7EIQ3 104 aa6.22□□□□□ -1.41
NPLOC4-208ENST00000572351 TMEM170BQ5T4T1 132 aa6.22□□□□□ -1.41
NPLOC4-208ENST00000572351 ORAOV1Q8WV07 137 aa6.22□□□□□ -1.41
NPLOC4-208ENST00000572351 MRPL35Q9NZE8 188 aaKnown RBP6.22□□□□□ -1.41
NPLOC4-208ENST00000572351 CDKN2A-AS1Q9UH64 79 aa6.22□□□□□ -1.41
NPLOC4-208ENST00000572351 DNAH17Q9UFH2 4485 aa6.21□□□□□ -1.41
NPLOC4-208ENST00000572351 IGLV4-69A0A075B6H9 119 aa6.21□□□□□ -1.42
NPLOC4-208ENST00000572351 GVQW2A0A096LPI5 108 aaPredicted RBP6.21□□□□□ -1.42
NPLOC4-208ENST00000572351 IGLV5-52A0A0A0MRZ9 124 aa6.21□□□□□ -1.42
NPLOC4-208ENST00000572351 C20orf202A1L168 122 aa6.21□□□□□ -1.42
NPLOC4-208ENST00000572351 PLNP26678 52 aa6.21□□□□□ -1.42
NPLOC4-208ENST00000572351 SPAG11BQ08648 103 aa6.21□□□□□ -1.42
NPLOC4-208ENST00000572351 ODF1Q14990 250 aa6.21□□□□□ -1.42
NPLOC4-208ENST00000572351 PET117Q6UWS5 81 aa6.21□□□□□ -1.42
NPLOC4-208ENST00000572351 SPATA12Q7Z6I5 190 aa6.21□□□□□ -1.42
NPLOC4-208ENST00000572351 C15orf56Q8N910 161 aa6.21□□□□□ -1.42
NPLOC4-208ENST00000572351 HIST1H2BLQ99880 126 aa6.21□□□□□ -1.42
NPLOC4-208ENST00000572351 IGHV3-64A0A075B6Q5 118 aa6.2□□□□□ -1.42
NPLOC4-208ENST00000572351 IGLV5-45A0A087WSX0 123 aa6.2□□□□□ -1.42
NPLOC4-208ENST00000572351 C5orf52A6NGY3 159 aa6.2□□□□□ -1.42
NPLOC4-208ENST00000572351 C11orf86A6NJI1 115 aa6.2□□□□□ -1.42
NPLOC4-208ENST00000572351 DPM2O94777 84 aa6.2□□□□□ -1.42
NPLOC4-208ENST00000572351 PRSS2P07478 247 aa6.2□□□□□ -1.42
NPLOC4-208ENST00000572351 SPINK8P0C7L1 97 aa6.2□□□□□ -1.42
NPLOC4-208ENST00000572351 C3orf79P0CE67 100 aa6.2□□□□□ -1.42
NPLOC4-208ENST00000572351 ZNF22P17026 224 aaPredicted RBP6.2□□□□□ -1.42
NPLOC4-208ENST00000572351 LINC01561Q8N1V8 128 aa6.2□□□□□ -1.42
NPLOC4-208ENST00000572351 OR10D4PQ8NGN7 298 aa6.2□□□□□ -1.42
NPLOC4-208ENST00000572351 NTN5Q8WTR8 489 aaPredicted RBP6.2□□□□□ -1.42
NPLOC4-208ENST00000572351 PMCHL2Q9BQD1 86 aa6.2□□□□□ -1.42
NPLOC4-208ENST00000572351 TOMM7Q9P0U1 55 aa6.2□□□□□ -1.42
NPLOC4-208ENST00000572351 DNAH10Q8IVF4 4471 aa6.2□□□□□ -1.42
NPLOC4-208ENST00000572351 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.19□□□□□ -1.42
NPLOC4-208ENST00000572351 IGKCP01834 107 aa6.19□□□□□ -1.42
NPLOC4-208ENST00000572351 LINC00526Q96FQ7 95 aa6.19□□□□□ -1.42
NPLOC4-208ENST00000572351 A0A1B0GVY2 172 aa6.18□□□□□ -1.42
NPLOC4-208ENST00000572351 FUSP35637 526 aaKnown RBP eCLIP6.18□□□□□ -1.42
NPLOC4-208ENST00000572351 KRTAP10-2P60368 255 aa6.18□□□□□ -1.42
NPLOC4-208ENST00000572351 HERVK_113P61574 105 aa6.18□□□□□ -1.42
NPLOC4-208ENST00000572351 CAMK2N2Q96S95 79 aa6.18□□□□□ -1.42
NPLOC4-208ENST00000572351 C16orf90A8MZG2 172 aa6.17□□□□□ -1.42
NPLOC4-208ENST00000572351 SMIM1B2RUZ4 78 aa6.17□□□□□ -1.42
NPLOC4-208ENST00000572351 CKS1BP61024 79 aa6.17□□□□□ -1.42
NPLOC4-208ENST00000572351 C6orf226Q5I0X4 101 aa6.17□□□□□ -1.42
NPLOC4-208ENST00000572351 LINC01545Q5VT33 79 aa6.17□□□□□ -1.42
NPLOC4-208ENST00000572351 CDPF1Q6NVV7 123 aa6.17□□□□□ -1.42
NPLOC4-208ENST00000572351 FAT2Q9NYQ8 4349 aa6.16□□□□□ -1.42
NPLOC4-208ENST00000572351 NDUFA1O15239 70 aa6.16□□□□□ -1.42
NPLOC4-208ENST00000572351 EIF4EBP3O60516 100 aaPredicted RBP6.16□□□□□ -1.42
NPLOC4-208ENST00000572351 AKR1D1P51857 326 aa6.16□□□□□ -1.42
NPLOC4-208ENST00000572351 CNBPP62633 177 aaKnown RBP6.16□□□□□ -1.42
NPLOC4-208ENST00000572351 SYCNQ0VAF6 134 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms