RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 NBDYA0A0U1RRE5 68 aa8.03□□□□□ -1.12
CDRT1-206ENST00000571263 ZNF22P17026 224 aaPredicted RBP8.03□□□□□ -1.12
CDRT1-206ENST00000571263 CLPSL2Q6UWE3 100 aa8.03□□□□□ -1.12
CDRT1-206ENST00000571263 VAMP8Q9BV40 100 aa8.03□□□□□ -1.12
CDRT1-206ENST00000571263 A0A087WZ39 114 aa8.02□□□□□ -1.13
CDRT1-206ENST00000571263 COX7A2LO14548 114 aa8.02□□□□□ -1.13
CDRT1-206ENST00000571263 APOMO95445 188 aa8.02□□□□□ -1.13
CDRT1-206ENST00000571263 XCL1P47992 114 aa8.02□□□□□ -1.13
CDRT1-206ENST00000571263 LINC00476Q8WZB0 136 aa8.02□□□□□ -1.13
CDRT1-206ENST00000571263 CDKN2A-AS1Q9UH64 79 aa8.02□□□□□ -1.13
CDRT1-206ENST00000571263 TMEM223A0PJW6 202 aa8.01□□□□□ -1.13
CDRT1-206ENST00000571263 LY6G6CO95867 125 aa8.01□□□□□ -1.13
CDRT1-206ENST00000571263 COX6A2Q02221 97 aa8.01□□□□□ -1.13
CDRT1-206ENST00000571263 CFAP161Q6P656 301 aa8.01□□□□□ -1.13
CDRT1-206ENST00000571263 IGLV10-54A0A075B6I4 117 aa8□□□□□ -1.13
CDRT1-206ENST00000571263 IGKV2D-24A0A075B6R9 120 aa8□□□□□ -1.13
CDRT1-206ENST00000571263 IGHV1-58A0A0C4DH39 117 aa8□□□□□ -1.13
CDRT1-206ENST00000571263 GAGE12HA6NDE8 117 aa8□□□□□ -1.13
CDRT1-206ENST00000571263 E9PLD3 99 aa8□□□□□ -1.13
CDRT1-206ENST00000571263 MALP21145 153 aa8□□□□□ -1.13
CDRT1-206ENST00000571263 FOXI1Q12951 378 aa8□□□□□ -1.13
CDRT1-206ENST00000571263 LINC00518Q8N0U6 118 aa8□□□□□ -1.13
CDRT1-206ENST00000571263 ATOH7Q8N100 152 aa8□□□□□ -1.13
CDRT1-206ENST00000571263 PLEKHB2Q96CS7 222 aa8□□□□□ -1.13
CDRT1-206ENST00000571263 SFTA2Q6UW10 78 aa7.99□□□□□ -1.13
CDRT1-206ENST00000571263 STPG4Q8N801 248 aa7.99□□□□□ -1.13
CDRT1-206ENST00000571263 C12orf57Q99622 126 aa7.99□□□□□ -1.13
CDRT1-206ENST00000571263 Q9HAA7 133 aa7.99□□□□□ -1.13
CDRT1-206ENST00000571263 LEPROTO15243 131 aa7.98□□□□□ -1.13
CDRT1-206ENST00000571263 C5orf38Q86SI9 138 aa7.98□□□□□ -1.13
CDRT1-206ENST00000571263 IGLV5-39A0A0G2JS06 123 aa7.97□□□□□ -1.13
CDRT1-206ENST00000571263 hDV102S1A0JD36 115 aa7.97□□□□□ -1.13
CDRT1-206ENST00000571263 SMIM1B2RUZ4 78 aa7.97□□□□□ -1.13
CDRT1-206ENST00000571263 F8WDY8 70 aa7.97□□□□□ -1.13
CDRT1-206ENST00000571263 NMUP48645 174 aa7.97□□□□□ -1.13
CDRT1-206ENST00000571263 SPATA45Q537H7 98 aa7.97□□□□□ -1.13
CDRT1-206ENST00000571263 KRTAP26-1Q6PEX3 210 aa7.97□□□□□ -1.13
CDRT1-206ENST00000571263 PAM16Q9Y3D7 125 aa7.97□□□□□ -1.13
CDRT1-206ENST00000571263 IGHV3-64A0A075B6Q5 118 aa7.96□□□□□ -1.14
CDRT1-206ENST00000571263 PSCAO43653 123 aa7.96□□□□□ -1.14
CDRT1-206ENST00000571263 PRSS2P07478 247 aa7.96□□□□□ -1.14
CDRT1-206ENST00000571263 LGALS3P17931 250 aaKnown RBP7.96□□□□□ -1.14
CDRT1-206ENST00000571263 Q6ZR54 194 aa7.96□□□□□ -1.14
CDRT1-206ENST00000571263 DYNC2H1Q8NCM8 4307 aaKnown RBP7.95□□□□□ -1.14
CDRT1-206ENST00000571263 J3QQQ9 107 aa7.95□□□□□ -1.14
CDRT1-206ENST00000571263 SPINK8P0C7L1 97 aa7.95□□□□□ -1.14
CDRT1-206ENST00000571263 CXCL5P42830 114 aa7.95□□□□□ -1.14
CDRT1-206ENST00000571263 Q8IZM0 81 aa7.95□□□□□ -1.14
CDRT1-206ENST00000571263 KRTAP1-5Q9BYS1 174 aa7.95□□□□□ -1.14
CDRT1-206ENST00000571263 LINC00587B1AMM8 73 aa7.94□□□□□ -1.14
CDRT1-206ENST00000571263 DLEU1O43261 78 aa7.94□□□□□ -1.14
CDRT1-206ENST00000571263 MAJINQ3KP22 176 aa7.94□□□□□ -1.14
CDRT1-206ENST00000571263 C14orf177Q52M58 125 aa7.94□□□□□ -1.14
CDRT1-206ENST00000571263 ANKRD39Q53RE8 183 aa7.94□□□□□ -1.14
CDRT1-206ENST00000571263 C6orf226Q5I0X4 101 aa7.94□□□□□ -1.14
CDRT1-206ENST00000571263 C6orf223Q8N319 242 aa7.94□□□□□ -1.14
CDRT1-206ENST00000571263 COX7B2Q8TF08 81 aa7.94□□□□□ -1.14
CDRT1-206ENST00000571263 TGP01266 2768 aa7.93□□□□□ -1.14
CDRT1-206ENST00000571263 MYMXA0A1B0GTQ4 84 aa7.93□□□□□ -1.14
CDRT1-206ENST00000571263 ZNF561-AS1K7EIQ3 104 aa7.93□□□□□ -1.14
CDRT1-206ENST00000571263 COX8AP10176 69 aa7.93□□□□□ -1.14
CDRT1-206ENST00000571263 ORAOV1Q8WV07 137 aa7.93□□□□□ -1.14
CDRT1-206ENST00000571263 LCE6AA0A183 80 aa7.92□□□□□ -1.14
CDRT1-206ENST00000571263 TSTD3H0UI37 97 aa7.92□□□□□ -1.14
CDRT1-206ENST00000571263 M0R2N4 97 aa7.92□□□□□ -1.14
CDRT1-206ENST00000571263 CKS1BP61024 79 aa7.92□□□□□ -1.14
CDRT1-206ENST00000571263 HERV-K104P63124 156 aa7.92□□□□□ -1.14
CDRT1-206ENST00000571263 C1orf134Q5TEV5 83 aa7.92□□□□□ -1.14
CDRT1-206ENST00000571263 CDPF1Q6NVV7 123 aa7.92□□□□□ -1.14
CDRT1-206ENST00000571263 C2orf48Q96LS8 159 aa7.92□□□□□ -1.14
CDRT1-206ENST00000571263 GVQW2A0A096LPI5 108 aaPredicted RBP7.91□□□□□ -1.14
CDRT1-206ENST00000571263 IGKV2D-26A0A0A0MRZ7 120 aa7.91□□□□□ -1.14
CDRT1-206ENST00000571263 SPAG11BQ08648 103 aa7.91□□□□□ -1.14
CDRT1-206ENST00000571263 SLC25A34Q6PIV7 304 aa7.91□□□□□ -1.14
CDRT1-206ENST00000571263 BOD1L2Q8IYS8 172 aa7.91□□□□□ -1.14
CDRT1-206ENST00000571263 TOMM7Q9P0U1 55 aa7.91□□□□□ -1.14
CDRT1-206ENST00000571263 UQCR10Q9UDW1 63 aa7.91□□□□□ -1.14
CDRT1-206ENST00000571263 NDUFA12Q9UI09 145 aa7.91□□□□□ -1.14
CDRT1-206ENST00000571263 NDUFA1O15239 70 aa7.9□□□□□ -1.14
CDRT1-206ENST00000571263 DNAH7Q8WXX0 4024 aa7.89□□□□□ -1.15
CDRT1-206ENST00000571263 ZNF815PA8K554 130 aa7.89□□□□□ -1.15
CDRT1-206ENST00000571263 USP17L23D6RBM5 183 aa7.89□□□□□ -1.15
CDRT1-206ENST00000571263 CIRBPQ14011 172 aaKnown RBP7.89□□□□□ -1.15
CDRT1-206ENST00000571263 KIAA0087Q14695 138 aa7.89□□□□□ -1.15
CDRT1-206ENST00000571263 NTN5Q8WTR8 489 aaPredicted RBP7.89□□□□□ -1.15
CDRT1-206ENST00000571263 C14orf144Q96I85 54 aa7.89□□□□□ -1.15
CDRT1-206ENST00000571263 GCSHP23434 173 aa7.88□□□□□ -1.15
CDRT1-206ENST00000571263 Q6ZRN7 208 aaPredicted RBP7.88□□□□□ -1.15
CDRT1-206ENST00000571263 PCP2Q8IVA1 136 aa7.88□□□□□ -1.15
CDRT1-206ENST00000571263 MAPKAPK5-AS1Q8N8E1 139 aa7.88□□□□□ -1.15
CDRT1-206ENST00000571263 C15orf56Q8N910 161 aa7.88□□□□□ -1.15
CDRT1-206ENST00000571263 SVIPQ8NHG7 77 aa7.88□□□□□ -1.15
CDRT1-206ENST00000571263 MIEN1Q9BRT3 115 aa7.88□□□□□ -1.15
CDRT1-206ENST00000571263 CSMD3Q7Z407 3707 aa7.88□□□□□ -1.15
CDRT1-206ENST00000571263 PLECQ15149 4684 aaKnown RBP7.87□□□□□ -1.15
CDRT1-206ENST00000571263 EREGO14944 169 aa7.87□□□□□ -1.15
CDRT1-206ENST00000571263 SCGB1D4Q6XE38 83 aa7.87□□□□□ -1.15
CDRT1-206ENST00000571263 ZNF625Q96I27 306 aaPredicted RBP7.87□□□□□ -1.15
CDRT1-206ENST00000571263 HIGD1BQ9P298 99 aa7.87□□□□□ -1.15
CDRT1-206ENST00000571263 STARD9Q9P2P6 4700 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms