RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 C5orf38Q86SI9 138 aa13.14□□□□□ -0.31
RPA1-202ENST00000570451 CAMK2N2Q96S95 79 aa13.14□□□□□ -0.31
RPA1-202ENST00000570451 TNFRSF6BO95407 300 aa13.13□□□□□ -0.31
RPA1-202ENST00000570451 S100A1P23297 94 aa13.13□□□□□ -0.31
RPA1-202ENST00000570451 PTTG1IPP53801 180 aa13.13□□□□□ -0.31
RPA1-202ENST00000570451 D6R8Y8 96 aa13.12□□□□□ -0.31
RPA1-202ENST00000570451 RPL39P62891 51 aaKnown RBP13.12□□□□□ -0.31
RPA1-202ENST00000570451 HBBP68871 147 aa13.12□□□□□ -0.31
RPA1-202ENST00000570451 TIMM21Q9BVV7 248 aa13.12□□□□□ -0.31
RPA1-202ENST00000570451 TRBV24-1A0A075B6N3 115 aa13.11□□□□□ -0.31
RPA1-202ENST00000570451 TCAPO15273 167 aa13.11□□□□□ -0.31
RPA1-202ENST00000570451 S100A8P05109 93 aa13.11□□□□□ -0.31
RPA1-202ENST00000570451 SMIM2Q9BVW6 85 aa13.11□□□□□ -0.31
RPA1-202ENST00000570451 APOMO95445 188 aa13.1□□□□□ -0.31
RPA1-202ENST00000570451 RPL32P62910 135 aaKnown RBP13.1□□□□□ -0.31
RPA1-202ENST00000570451 RPL18AQ02543 176 aaKnown RBP13.09□□□□□ -0.31
RPA1-202ENST00000570451 SPAG11BQ08648 103 aa13.09□□□□□ -0.31
RPA1-202ENST00000570451 TRAV9-1A0A075B6T8 112 aa13.08□□□□□ -0.32
RPA1-202ENST00000570451 NPYP01303 97 aa13.08□□□□□ -0.32
RPA1-202ENST00000570451 Q6ZRP5 223 aa13.08□□□□□ -0.32
RPA1-202ENST00000570451 ATP5L2Q7Z4Y8 100 aa13.08□□□□□ -0.32
RPA1-202ENST00000570451 C2orf48Q96LS8 159 aa13.08□□□□□ -0.32
RPA1-202ENST00000570451 SMCO4Q9NRQ5 59 aa13.08□□□□□ -0.32
RPA1-202ENST00000570451 A0A0J9YXV3 536 aa13.07□□□□□ -0.32
RPA1-202ENST00000570451 A0A1B0GXF2 115 aa13.07□□□□□ -0.32
RPA1-202ENST00000570451 LINC01600Q96MT4 127 aa13.07□□□□□ -0.32
RPA1-202ENST00000570451 OPRPNQ99935 248 aaPredicted RBP13.07□□□□□ -0.32
RPA1-202ENST00000570451 SPANXA1Q9NS26 97 aa13.07□□□□□ -0.32
RPA1-202ENST00000570451 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.06□□□□□ -0.32
RPA1-202ENST00000570451 SPINK6Q6UWN8 80 aa13.06□□□□□ -0.32
RPA1-202ENST00000570451 CBLN2Q8IUK8 224 aa13.06□□□□□ -0.32
RPA1-202ENST00000570451 A0A1W2PNN7 141 aa13.05□□□□□ -0.32
RPA1-202ENST00000570451 IFITM10A6NMD0 228 aa13.05□□□□□ -0.32
RPA1-202ENST00000570451 REG3GQ6UW15 175 aa13.05□□□□□ -0.32
RPA1-202ENST00000570451 OR10D4PQ8NGN7 298 aa13.05□□□□□ -0.32
RPA1-202ENST00000570451 ORAOV1Q8WV07 137 aa13.05□□□□□ -0.32
RPA1-202ENST00000570451 PPBPP02775 128 aa13.04□□□□□ -0.32
RPA1-202ENST00000570451 FAM104AQ969W3 186 aa13.04□□□□□ -0.32
RPA1-202ENST00000570451 C9orf116Q5BN46 136 aaPredicted RBP13.03□□□□□ -0.32
RPA1-202ENST00000570451 ORMDL3Q8N138 153 aa13.03□□□□□ -0.32
RPA1-202ENST00000570451 TGIF2-C20orf24A0A0A6YYL0 155 aa13.02□□□□□ -0.33
RPA1-202ENST00000570451 RAB5AP20339 215 aa13.02□□□□□ -0.33
RPA1-202ENST00000570451 MRPS36P82909 103 aaKnown RBP13.02□□□□□ -0.33
RPA1-202ENST00000570451 ODF1Q14990 250 aa13.02□□□□□ -0.33
RPA1-202ENST00000570451 TMEM136Q6ZRR5 245 aa13.02□□□□□ -0.33
RPA1-202ENST00000570451 PRELID3AQ96N28 172 aa13.02□□□□□ -0.33
RPA1-202ENST00000570451 SCO1O75880 301 aa13.01□□□□□ -0.33
RPA1-202ENST00000570451 IGHV3OR16-9A0A0B4J2B5 98 aa13□□□□□ -0.33
RPA1-202ENST00000570451 SRSF9Q13242 221 aaKnown RBP eCLIP13□□□□□ -0.33
RPA1-202ENST00000570451 RNF151Q2KHN1 245 aa13□□□□□ -0.33
RPA1-202ENST00000570451 NDUFA1O15239 70 aa12.99□□□□□ -0.33
RPA1-202ENST00000570451 MT-ND6P03923 174 aa12.99□□□□□ -0.33
RPA1-202ENST00000570451 IFI27P40305 119 aaPredicted RBP12.99□□□□□ -0.33
RPA1-202ENST00000570451 YPEL4Q96NS1 127 aa12.99□□□□□ -0.33
RPA1-202ENST00000570451 LRP2P98164 4655 aa12.98□□□□□ -0.33
RPA1-202ENST00000570451 COX19Q49B96 90 aa12.98□□□□□ -0.33
RPA1-202ENST00000570451 PHF5AQ7RTV0 110 aaKnown RBP12.98□□□□□ -0.33
RPA1-202ENST00000570451 MRPL35Q9NZE8 188 aaKnown RBP12.98□□□□□ -0.33
RPA1-202ENST00000570451 LOC389332A0A1B0GUA5 103 aa12.97□□□□□ -0.33
RPA1-202ENST00000570451 PSORS1C2Q9UIG4 136 aa12.97□□□□□ -0.33
RPA1-202ENST00000570451 F8WDY8 70 aa12.96□□□□□ -0.33
RPA1-202ENST00000570451 C10orf25Q5T742 122 aa12.96□□□□□ -0.33
RPA1-202ENST00000570451 UNQ6190/PRO20217Q6UXQ8 127 aa12.96□□□□□ -0.33
RPA1-202ENST00000570451 C1orf137Q5JT78 98 aa12.95□□□□□ -0.34
RPA1-202ENST00000570451 GNB1LQ9BYB4 327 aa12.95□□□□□ -0.34
RPA1-202ENST00000570451 IGLV4-3A0A075B6K6 122 aa12.94□□□□□ -0.34
RPA1-202ENST00000570451 KRTAP10-8P60410 259 aa12.94□□□□□ -0.34
RPA1-202ENST00000570451 TMEM141Q96I45 108 aa12.94□□□□□ -0.34
RPA1-202ENST00000570451 MAP1LC3AQ9H492 121 aa12.94□□□□□ -0.34
RPA1-202ENST00000570451 PYGO1Q9Y3Y4 419 aa12.94□□□□□ -0.34
RPA1-202ENST00000570451 C6orf48Q9UBA6 75 aa12.93□□□□□ -0.34
RPA1-202ENST00000570451 A0A087WZ39 114 aa12.92□□□□□ -0.34
RPA1-202ENST00000570451 FAM168BA1KXE4 195 aa12.92□□□□□ -0.34
RPA1-202ENST00000570451 GAGE2EQ4V326 116 aa12.92□□□□□ -0.34
RPA1-202ENST00000570451 LINC00242Q5T6M2 205 aa12.92□□□□□ -0.34
RPA1-202ENST00000570451 GAGE2DQ9UEU5 116 aa12.92□□□□□ -0.34
RPA1-202ENST00000570451 LAMTOR2Q9Y2Q5 125 aa12.92□□□□□ -0.34
RPA1-202ENST00000570451 TEX43Q6ZNM6 134 aa12.91□□□□□ -0.34
RPA1-202ENST00000570451 FAM19A5Q7Z5A7 132 aaPredicted RBP12.91□□□□□ -0.34
RPA1-202ENST00000570451 MRPL18Q9H0U6 180 aaKnown RBP12.91□□□□□ -0.34
RPA1-202ENST00000570451 COLCA2A8K830 154 aa12.9□□□□□ -0.34
RPA1-202ENST00000570451 FABP9Q0Z7S8 132 aa12.9□□□□□ -0.34
RPA1-202ENST00000570451 C2orf88Q9BSF0 95 aa12.9□□□□□ -0.34
RPA1-202ENST00000570451 CYSLTR1Q9Y271 337 aa12.9□□□□□ -0.34
RPA1-202ENST00000570451 TRAPPC1Q9Y5R8 145 aa12.9□□□□□ -0.34
RPA1-202ENST00000570451 PRSS47A8MTI9 375 aa12.89□□□□□ -0.35
RPA1-202ENST00000570451 TLX1NBP0CAT3 122 aa12.89□□□□□ -0.35
RPA1-202ENST00000570451 Q6ZN92 141 aa12.89□□□□□ -0.35
RPA1-202ENST00000570451 Q8N8P6 123 aa12.89□□□□□ -0.35
RPA1-202ENST00000570451 KIAA0087Q14695 138 aa12.88□□□□□ -0.35
RPA1-202ENST00000570451 KIAA1644Q3SXP7 199 aa12.88□□□□□ -0.35
RPA1-202ENST00000570451 ZC2HC1BQ5TFG8 222 aa12.88□□□□□ -0.35
RPA1-202ENST00000570451 C2orf66Q6UXQ4 117 aa12.88□□□□□ -0.35
RPA1-202ENST00000570451 RNF213Q63HN8 5207 aa12.87□□□□□ -0.35
RPA1-202ENST00000570451 UBE2D1P51668 147 aa12.87□□□□□ -0.35
RPA1-202ENST00000570451 C2orf82Q6UX34 121 aa12.87□□□□□ -0.35
RPA1-202ENST00000570451 PACRGQ96M98 296 aaPredicted RBP12.86□□□□□ -0.35
RPA1-202ENST00000570451 VCX2Q9H322 139 aa12.86□□□□□ -0.35
RPA1-202ENST00000570451 TRBV30A0A0K0K1B3 111 aa12.85□□□□□ -0.35
RPA1-202ENST00000570451 IGLV7-43P04211 117 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms