RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 RPL23P62829 140 aaKnown RBP5.24□□□□□ -1.57
CTDNEP1-203ENST00000570385 GAGE2EQ4V326 116 aa5.24□□□□□ -1.57
CTDNEP1-203ENST00000570385 UNQ6190/PRO20217Q6UXQ8 127 aa5.24□□□□□ -1.57
CTDNEP1-203ENST00000570385 FAM19A5Q7Z5A7 132 aaPredicted RBP5.24□□□□□ -1.57
CTDNEP1-203ENST00000570385 TMEM18Q96B42 140 aa5.24□□□□□ -1.57
CTDNEP1-203ENST00000570385 TIMM21Q9BVV7 248 aa5.24□□□□□ -1.57
CTDNEP1-203ENST00000570385 GAGE2DQ9UEU5 116 aa5.24□□□□□ -1.57
CTDNEP1-203ENST00000570385 IGHV3OR16-9A0A0B4J2B5 98 aa5.23□□□□□ -1.57
CTDNEP1-203ENST00000570385 IFITM10A6NMD0 228 aa5.23□□□□□ -1.57
CTDNEP1-203ENST00000570385 C9JQL5 133 aa5.23□□□□□ -1.57
CTDNEP1-203ENST00000570385 D6R8Y8 96 aa5.23□□□□□ -1.57
CTDNEP1-203ENST00000570385 TNFRSF6BO95407 300 aa5.23□□□□□ -1.57
CTDNEP1-203ENST00000570385 NPYP01303 97 aa5.23□□□□□ -1.57
CTDNEP1-203ENST00000570385 IGLV7-43P04211 117 aa5.23□□□□□ -1.57
CTDNEP1-203ENST00000570385 FAM74A3Q4VXF1 159 aa5.23□□□□□ -1.57
CTDNEP1-203ENST00000570385 MRPL54Q6P161 138 aaKnown RBP5.23□□□□□ -1.57
CTDNEP1-203ENST00000570385 OR10D4PQ8NGN7 298 aa5.23□□□□□ -1.57
CTDNEP1-203ENST00000570385 C20orf78Q9BR46 151 aa5.23□□□□□ -1.57
CTDNEP1-203ENST00000570385 MRPL35Q9NZE8 188 aaKnown RBP5.23□□□□□ -1.57
CTDNEP1-203ENST00000570385 C6orf48Q9UBA6 75 aa5.23□□□□□ -1.57
CTDNEP1-203ENST00000570385 SMIM27A0A1W2PRY6 76 aa5.22□□□□□ -1.57
CTDNEP1-203ENST00000570385 NDUFA1O15239 70 aa5.22□□□□□ -1.57
CTDNEP1-203ENST00000570385 SRSF3P84103 164 aaKnown RBP5.22□□□□□ -1.57
CTDNEP1-203ENST00000570385 RNF151Q2KHN1 245 aa5.22□□□□□ -1.57
CTDNEP1-203ENST00000570385 KRTAP7-1Q8IUC3 87 aa5.22□□□□□ -1.57
CTDNEP1-203ENST00000570385 DIRC1Q969H9 104 aa5.22□□□□□ -1.57
CTDNEP1-203ENST00000570385 IMMP2LQ96T52 175 aa5.22□□□□□ -1.57
CTDNEP1-203ENST00000570385 SMIM2Q9BVW6 85 aa5.22□□□□□ -1.57
CTDNEP1-203ENST00000570385 TRBV24-1A0A075B6N3 115 aa5.21□□□□□ -1.58
CTDNEP1-203ENST00000570385 LINC00862A6NCI5 91 aa5.21□□□□□ -1.58
CTDNEP1-203ENST00000570385 HBBP68871 147 aa5.21□□□□□ -1.58
CTDNEP1-203ENST00000570385 C2orf82Q6UX34 121 aa5.21□□□□□ -1.58
CTDNEP1-203ENST00000570385 SPANXA1Q9NS26 97 aa5.21□□□□□ -1.58
CTDNEP1-203ENST00000570385 NAT8Q9UHE5 227 aa5.21□□□□□ -1.58
CTDNEP1-203ENST00000570385 H0Y9J4 135 aa5.2□□□□□ -1.58
CTDNEP1-203ENST00000570385 RPL32P62910 135 aaKnown RBP5.2□□□□□ -1.58
CTDNEP1-203ENST00000570385 UBE2BP63146 152 aa5.2□□□□□ -1.58
CTDNEP1-203ENST00000570385 MRPS36P82909 103 aaKnown RBP5.2□□□□□ -1.58
CTDNEP1-203ENST00000570385 ZC2HC1BQ5TFG8 222 aa5.2□□□□□ -1.58
CTDNEP1-203ENST00000570385 TGIF2-C20orf24A0A0A6YYL0 155 aa5.19□□□□□ -1.58
CTDNEP1-203ENST00000570385 LOC389332A0A1B0GUA5 103 aa5.19□□□□□ -1.58
CTDNEP1-203ENST00000570385 M0QXV9 152 aa5.19□□□□□ -1.58
CTDNEP1-203ENST00000570385 KIAA0087Q14695 138 aa5.19□□□□□ -1.58
CTDNEP1-203ENST00000570385 LINC00242Q5T6M2 205 aa5.19□□□□□ -1.58
CTDNEP1-203ENST00000570385 SMDT1Q9H4I9 107 aa5.19□□□□□ -1.58
CTDNEP1-203ENST00000570385 A0A1B0GW15 77 aa5.18□□□□□ -1.58
CTDNEP1-203ENST00000570385 A0A1B0GXF2 115 aa5.18□□□□□ -1.58
CTDNEP1-203ENST00000570385 F8W036 122 aa5.18□□□□□ -1.58
CTDNEP1-203ENST00000570385 F8WDY8 70 aa5.18□□□□□ -1.58
CTDNEP1-203ENST00000570385 KRTAP1-4P0C5Y4 121 aa5.18□□□□□ -1.58
CTDNEP1-203ENST00000570385 TLX1NBP0CAT3 122 aa5.18□□□□□ -1.58
CTDNEP1-203ENST00000570385 RAB5AP20339 215 aa5.18□□□□□ -1.58
CTDNEP1-203ENST00000570385 IFI27P40305 119 aaPredicted RBP5.18□□□□□ -1.58
CTDNEP1-203ENST00000570385 C9orf129Q5T035 196 aaKnown RBP5.18□□□□□ -1.58
CTDNEP1-203ENST00000570385 TMEM136Q6ZRR5 245 aa5.18□□□□□ -1.58
CTDNEP1-203ENST00000570385 IGLV4-3A0A075B6K6 122 aa5.17□□□□□ -1.58
CTDNEP1-203ENST00000570385 S100A8P05109 93 aa5.17□□□□□ -1.58
CTDNEP1-203ENST00000570385 UBE2D1P51668 147 aa5.17□□□□□ -1.58
CTDNEP1-203ENST00000570385 PEA15Q15121 130 aa5.17□□□□□ -1.58
CTDNEP1-203ENST00000570385 PRR4Q16378 134 aa5.17□□□□□ -1.58
CTDNEP1-203ENST00000570385 ORMDL3Q8N138 153 aa5.17□□□□□ -1.58
CTDNEP1-203ENST00000570385 LINC00469Q8N7U9 141 aa5.17□□□□□ -1.58
CTDNEP1-203ENST00000570385 PACRGQ96M98 296 aaPredicted RBP5.17□□□□□ -1.58
CTDNEP1-203ENST00000570385 PRELID3AQ96N28 172 aa5.17□□□□□ -1.58
CTDNEP1-203ENST00000570385 TOMM7Q9P0U1 55 aa5.17□□□□□ -1.58
CTDNEP1-203ENST00000570385 IGLV1-50A0A075B6I6 118 aa5.16□□□□□ -1.58
CTDNEP1-203ENST00000570385 A0A1B0GVG6 124 aa5.16□□□□□ -1.58
CTDNEP1-203ENST00000570385 NDUFC2-KCTD14E9PQ53 114 aa5.16□□□□□ -1.58
CTDNEP1-203ENST00000570385 PPBPP02775 128 aa5.16□□□□□ -1.58
CTDNEP1-203ENST00000570385 TMEM141Q96I45 108 aa5.16□□□□□ -1.58
CTDNEP1-203ENST00000570385 TRBV30A0A0K0K1B3 111 aa5.15□□□□□ -1.59
CTDNEP1-203ENST00000570385 TEX43Q6ZNM6 134 aa5.15□□□□□ -1.59
CTDNEP1-203ENST00000570385 XAGE1AQ9HD64 81 aa5.15□□□□□ -1.59
CTDNEP1-203ENST00000570385 PYGO1Q9Y3Y4 419 aa5.15□□□□□ -1.59
CTDNEP1-203ENST00000570385 TSPAN13O95857 204 aa5.14□□□□□ -1.59
CTDNEP1-203ENST00000570385 PRSS2P07478 247 aa5.14□□□□□ -1.59
CTDNEP1-203ENST00000570385 CKS1BP61024 79 aa5.14□□□□□ -1.59
CTDNEP1-203ENST00000570385 LINC00173Q6ZV60 143 aa5.14□□□□□ -1.59
CTDNEP1-203ENST00000570385 C2orf88Q9BSF0 95 aa5.14□□□□□ -1.59
CTDNEP1-203ENST00000570385 VCX2Q9H322 139 aa5.14□□□□□ -1.59
CTDNEP1-203ENST00000570385 C6orf226Q5I0X4 101 aa5.13□□□□□ -1.59
CTDNEP1-203ENST00000570385 C2orf66Q6UXQ4 117 aa5.13□□□□□ -1.59
CTDNEP1-203ENST00000570385 Q6ZN92 141 aa5.13□□□□□ -1.59
CTDNEP1-203ENST00000570385 ALKBH7Q9BT30 221 aaPredicted RBP5.13□□□□□ -1.59
CTDNEP1-203ENST00000570385 MAP1LC3AQ9H492 121 aa5.13□□□□□ -1.59
CTDNEP1-203ENST00000570385 CYSLTR1Q9Y271 337 aa5.13□□□□□ -1.59
CTDNEP1-203ENST00000570385 C22orf24Q9Y442 160 aa5.13□□□□□ -1.59
CTDNEP1-203ENST00000570385 ZNF861PO60384 105 aa5.12□□□□□ -1.59
CTDNEP1-203ENST00000570385 ATP5L2Q7Z4Y8 100 aa5.12□□□□□ -1.59
CTDNEP1-203ENST00000570385 Q8N8P6 123 aa5.12□□□□□ -1.59
CTDNEP1-203ENST00000570385 CTDSP1Q9GZU7 261 aa5.12□□□□□ -1.59
CTDNEP1-203ENST00000570385 IGIPA6NJ69 53 aa5.11□□□□□ -1.59
CTDNEP1-203ENST00000570385 RPL13AP40429 203 aaKnown RBP5.11□□□□□ -1.59
CTDNEP1-203ENST00000570385 LINC01561Q8N1V8 128 aa5.11□□□□□ -1.59
CTDNEP1-203ENST00000570385 AMELXQ99217 191 aa5.11□□□□□ -1.59
CTDNEP1-203ENST00000570385 CDKN2A-AS1Q9UH64 79 aa5.11□□□□□ -1.59
CTDNEP1-203ENST00000570385 A0A087X002 238 aa5.1□□□□□ -1.59
CTDNEP1-203ENST00000570385 RPL37AP8A6NKH3 93 aa5.1□□□□□ -1.59
CTDNEP1-203ENST00000570385 PRSS47A8MTI9 375 aa5.1□□□□□ -1.59
CTDNEP1-203ENST00000570385 Q8IZM0 81 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms