RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 HMCN2Q8NDA2 5059 aa14.05□□□□□ -0.16
RBFOX1-219ENST00000569895 F8WDY8 70 aa14.04□□□□□ -0.16
RBFOX1-219ENST00000569895 LINC01600Q96MT4 127 aa14.04□□□□□ -0.16
RBFOX1-219ENST00000569895 RNF151Q2KHN1 245 aa14.03□□□□□ -0.16
RBFOX1-219ENST00000569895 REG3GQ6UW15 175 aa14.03□□□□□ -0.16
RBFOX1-219ENST00000569895 TMEM136Q6ZRR5 245 aa14.03□□□□□ -0.16
RBFOX1-219ENST00000569895 IFITM10A6NMD0 228 aa14.01□□□□□ -0.17
RBFOX1-219ENST00000569895 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.01□□□□□ -0.17
RBFOX1-219ENST00000569895 IFI27P40305 119 aaPredicted RBP14.01□□□□□ -0.17
RBFOX1-219ENST00000569895 RPL18AQ02543 176 aaKnown RBP14.01□□□□□ -0.17
RBFOX1-219ENST00000569895 PRELID3AQ96N28 172 aa14.01□□□□□ -0.17
RBFOX1-219ENST00000569895 IGHV3OR16-9A0A0B4J2B5 98 aa14□□□□□ -0.17
RBFOX1-219ENST00000569895 ORAOV1Q8WV07 137 aa14□□□□□ -0.17
RBFOX1-219ENST00000569895 OPRPNQ99935 248 aaPredicted RBP14□□□□□ -0.17
RBFOX1-219ENST00000569895 FAM104AQ969W3 186 aa13.99□□□□□ -0.17
RBFOX1-219ENST00000569895 IMMP2LQ96T52 175 aa13.99□□□□□ -0.17
RBFOX1-219ENST00000569895 MRPL35Q9NZE8 188 aaKnown RBP13.99□□□□□ -0.17
RBFOX1-219ENST00000569895 A0A1W2PNN7 141 aa13.98□□□□□ -0.17
RBFOX1-219ENST00000569895 PNRC1Q12796 327 aaPredicted RBP13.98□□□□□ -0.17
RBFOX1-219ENST00000569895 C9orf116Q5BN46 136 aaPredicted RBP13.98□□□□□ -0.17
RBFOX1-219ENST00000569895 LAMTOR2Q9Y2Q5 125 aa13.98□□□□□ -0.17
RBFOX1-219ENST00000569895 PYGO1Q9Y3Y4 419 aa13.98□□□□□ -0.17
RBFOX1-219ENST00000569895 TGIF2-C20orf24A0A0A6YYL0 155 aa13.97□□□□□ -0.17
RBFOX1-219ENST00000569895 NDUFA1O15239 70 aa13.97□□□□□ -0.17
RBFOX1-219ENST00000569895 SRSF9Q13242 221 aaKnown RBP eCLIP13.97□□□□□ -0.17
RBFOX1-219ENST00000569895 ANAPC16Q96DE5 110 aa13.97□□□□□ -0.17
RBFOX1-219ENST00000569895 MT-ND4LP03901 98 aa13.96□□□□□ -0.17
RBFOX1-219ENST00000569895 RAB14P61106 215 aa13.96□□□□□ -0.17
RBFOX1-219ENST00000569895 A0A0J9YXV3 536 aa13.95□□□□□ -0.18
RBFOX1-219ENST00000569895 PRSS47A8MTI9 375 aa13.95□□□□□ -0.18
RBFOX1-219ENST00000569895 MAP1LC3AQ9H492 121 aa13.95□□□□□ -0.18
RBFOX1-219ENST00000569895 MT-ND6P03923 174 aa13.94□□□□□ -0.18
RBFOX1-219ENST00000569895 LOC389332A0A1B0GUA5 103 aa13.93□□□□□ -0.18
RBFOX1-219ENST00000569895 TMEM141Q96I45 108 aa13.93□□□□□ -0.18
RBFOX1-219ENST00000569895 A0A087WZ39 114 aa13.92□□□□□ -0.18
RBFOX1-219ENST00000569895 IGLV4-3A0A075B6K6 122 aa13.91□□□□□ -0.18
RBFOX1-219ENST00000569895 TEX43Q6ZNM6 134 aa13.91□□□□□ -0.18
RBFOX1-219ENST00000569895 TLX1NBP0CAT3 122 aa13.9□□□□□ -0.18
RBFOX1-219ENST00000569895 LINC00242Q5T6M2 205 aa13.9□□□□□ -0.18
RBFOX1-219ENST00000569895 UNQ6190/PRO20217Q6UXQ8 127 aa13.9□□□□□ -0.18
RBFOX1-219ENST00000569895 Q6ZN92 141 aa13.9□□□□□ -0.18
RBFOX1-219ENST00000569895 C2orf88Q9BSF0 95 aa13.9□□□□□ -0.18
RBFOX1-219ENST00000569895 PSORS1C2Q9UIG4 136 aa13.9□□□□□ -0.18
RBFOX1-219ENST00000569895 CYSLTR1Q9Y271 337 aa13.9□□□□□ -0.18
RBFOX1-219ENST00000569895 KRTAP10-8P60410 259 aa13.89□□□□□ -0.19
RBFOX1-219ENST00000569895 Q8N8P6 123 aa13.89□□□□□ -0.19
RBFOX1-219ENST00000569895 ORMDL2Q53FV1 153 aa13.88□□□□□ -0.19
RBFOX1-219ENST00000569895 C10orf25Q5T742 122 aa13.88□□□□□ -0.19
RBFOX1-219ENST00000569895 PHF5AQ7RTV0 110 aaKnown RBP13.88□□□□□ -0.19
RBFOX1-219ENST00000569895 K7EMI3 77 aa13.87□□□□□ -0.19
RBFOX1-219ENST00000569895 C1orf137Q5JT78 98 aa13.87□□□□□ -0.19
RBFOX1-219ENST00000569895 C2orf66Q6UXQ4 117 aa13.87□□□□□ -0.19
RBFOX1-219ENST00000569895 LINC01561Q8N1V8 128 aa13.87□□□□□ -0.19
RBFOX1-219ENST00000569895 VCX2Q9H322 139 aa13.87□□□□□ -0.19
RBFOX1-219ENST00000569895 C6orf48Q9UBA6 75 aa13.87□□□□□ -0.19
RBFOX1-219ENST00000569895 TRBV30A0A0K0K1B3 111 aa13.85□□□□□ -0.19
RBFOX1-219ENST00000569895 NPSP0C0P6 89 aa13.85□□□□□ -0.19
RBFOX1-219ENST00000569895 G0S2P27469 103 aa13.85□□□□□ -0.19
RBFOX1-219ENST00000569895 UBE2D1P51668 147 aa13.85□□□□□ -0.19
RBFOX1-219ENST00000569895 KIAA0087Q14695 138 aa13.85□□□□□ -0.19
RBFOX1-219ENST00000569895 GAGE2EQ4V326 116 aa13.85□□□□□ -0.19
RBFOX1-219ENST00000569895 PACRGQ96M98 296 aaPredicted RBP13.85□□□□□ -0.19
RBFOX1-219ENST00000569895 GAGE2DQ9UEU5 116 aa13.85□□□□□ -0.19
RBFOX1-219ENST00000569895 CTDSP1Q9GZU7 261 aa13.84□□□□□ -0.19
RBFOX1-219ENST00000569895 NXT2Q9NPJ8 142 aaKnown RBP13.84□□□□□ -0.19
RBFOX1-219ENST00000569895 UBR4Q5T4S7 5183 aa13.83□□□□□ -0.2
RBFOX1-219ENST00000569895 PAPPA-AS1Q5QFB9 102 aa13.82□□□□□ -0.2
RBFOX1-219ENST00000569895 AMELXQ99217 191 aa13.82□□□□□ -0.2
RBFOX1-219ENST00000569895 TNXBP22105 4242 aa13.82□□□□□ -0.2
RBFOX1-219ENST00000569895 FAM168BA1KXE4 195 aa13.81□□□□□ -0.2
RBFOX1-219ENST00000569895 PRSS2P07478 247 aa13.81□□□□□ -0.2
RBFOX1-219ENST00000569895 FAM19A5Q7Z5A7 132 aaPredicted RBP13.81□□□□□ -0.2
RBFOX1-219ENST00000569895 SEC11AP67812 179 aa13.8□□□□□ -0.2
RBFOX1-219ENST00000569895 C2orf82Q6UX34 121 aa13.8□□□□□ -0.2
RBFOX1-219ENST00000569895 DIRC1Q969H9 104 aa13.8□□□□□ -0.2
RBFOX1-219ENST00000569895 IGIPA6NJ69 53 aa13.79□□□□□ -0.2
RBFOX1-219ENST00000569895 NDUFC2-KCTD14E9PQ53 114 aa13.79□□□□□ -0.2
RBFOX1-219ENST00000569895 IGLV7-43P04211 117 aa13.79□□□□□ -0.2
RBFOX1-219ENST00000569895 CKS1BP61024 79 aa13.78□□□□□ -0.2
RBFOX1-219ENST00000569895 C6orf226Q5I0X4 101 aa13.78□□□□□ -0.2
RBFOX1-219ENST00000569895 CLLU1Q5K131 121 aa13.78□□□□□ -0.2
RBFOX1-219ENST00000569895 ZC2HC1BQ5TFG8 222 aa13.78□□□□□ -0.2
RBFOX1-219ENST00000569895 LINC00173Q6ZV60 143 aa13.78□□□□□ -0.2
RBFOX1-219ENST00000569895 HERVK_113P63121 156 aa13.76□□□□□ -0.21
RBFOX1-219ENST00000569895 UBE2BP63146 152 aa13.76□□□□□ -0.21
RBFOX1-219ENST00000569895 FAM19A3Q7Z5A8 133 aa13.76□□□□□ -0.21
RBFOX1-219ENST00000569895 TOMM7Q9P0U1 55 aa13.76□□□□□ -0.21
RBFOX1-219ENST00000569895 M0QXV9 152 aa13.75□□□□□ -0.21
RBFOX1-219ENST00000569895 ODF1Q14990 250 aa13.75□□□□□ -0.21
RBFOX1-219ENST00000569895 UQCC3Q6UW78 93 aa13.74□□□□□ -0.21
RBFOX1-219ENST00000569895 Q8IZM0 81 aa13.74□□□□□ -0.21
RBFOX1-219ENST00000569895 TIMM17AQ99595 171 aa13.74□□□□□ -0.21
RBFOX1-219ENST00000569895 ALKBH7Q9BT30 221 aaPredicted RBP13.74□□□□□ -0.21
RBFOX1-219ENST00000569895 GEMIN7Q9H840 131 aaKnown RBP13.74□□□□□ -0.21
RBFOX1-219ENST00000569895 TRAV9-1A0A075B6T8 112 aa13.73□□□□□ -0.21
RBFOX1-219ENST00000569895 TOMM6Q96B49 74 aa13.73□□□□□ -0.21
RBFOX1-219ENST00000569895 KIAA1644Q3SXP7 199 aa13.71□□□□□ -0.21
RBFOX1-219ENST00000569895 C9orf129Q5T035 196 aaKnown RBP13.71□□□□□ -0.21
RBFOX1-219ENST00000569895 TMEM218A2RU14 115 aa13.7□□□□□ -0.22
RBFOX1-219ENST00000569895 LINC01549A6NIU2 74 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms