RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 V9GYV3 84 aa3.48□□□□□ -1.85
CDH13-212ENST00000569144 HIGD1CA8MV81 97 aa3.47□□□□□ -1.85
CDH13-212ENST00000569144 TSPAN13O95857 204 aa3.47□□□□□ -1.85
CDH13-212ENST00000569144 RPL23P62829 140 aaKnown RBP3.47□□□□□ -1.85
CDH13-212ENST00000569144 TMEM241Q24JQ0 296 aa3.47□□□□□ -1.85
CDH13-212ENST00000569144 FAM74A3Q4VXF1 159 aa3.47□□□□□ -1.85
CDH13-212ENST00000569144 PHF5AQ7RTV0 110 aaKnown RBP3.47□□□□□ -1.85
CDH13-212ENST00000569144 TSKUQ8WUA8 353 aa3.47□□□□□ -1.85
CDH13-212ENST00000569144 PGLYRP4Q96LB8 373 aa3.47□□□□□ -1.85
CDH13-212ENST00000569144 NIT2Q9NQR4 276 aa3.47□□□□□ -1.85
CDH13-212ENST00000569144 CARHSP1Q9Y2V2 147 aaKnown RBP3.47□□□□□ -1.85
CDH13-212ENST00000569144 LOC107984640A0A0U1RRK4 108 aa3.46□□□□□ -1.86
CDH13-212ENST00000569144 A0A1B0GUT8 65 aa3.46□□□□□ -1.86
CDH13-212ENST00000569144 UBE2L6O14933 153 aa3.46□□□□□ -1.86
CDH13-212ENST00000569144 GAGE2BQ13066 116 aa3.46□□□□□ -1.86
CDH13-212ENST00000569144 PEA15Q15121 130 aa3.46□□□□□ -1.86
CDH13-212ENST00000569144 ADIRFQ15847 76 aa3.46□□□□□ -1.86
CDH13-212ENST00000569144 TPRXLQ17RH7 258 aa3.46□□□□□ -1.86
CDH13-212ENST00000569144 C9orf116Q5BN46 136 aaPredicted RBP3.46□□□□□ -1.86
CDH13-212ENST00000569144 CHCHD10Q8WYQ3 142 aaPredicted RBP3.46□□□□□ -1.86
CDH13-212ENST00000569144 RPL39LQ96EH5 51 aaKnown RBP3.46□□□□□ -1.86
CDH13-212ENST00000569144 SMDT1Q9H4I9 107 aa3.46□□□□□ -1.86
CDH13-212ENST00000569144 NAT8Q9UHE5 227 aa3.46□□□□□ -1.86
CDH13-212ENST00000569144 IGHV1-58A0A0C4DH39 117 aa3.45□□□□□ -1.86
CDH13-212ENST00000569144 IGKV3OR2-268A0A0C4DH90 116 aa3.45□□□□□ -1.86
CDH13-212ENST00000569144 TRBV6-5A0A0K0K1A5 114 aa3.45□□□□□ -1.86
CDH13-212ENST00000569144 SMIM27A0A1W2PRY6 76 aa3.45□□□□□ -1.86
CDH13-212ENST00000569144 FGF6P10767 208 aa3.45□□□□□ -1.86
CDH13-212ENST00000569144 SYCNQ0VAF6 134 aa3.45□□□□□ -1.86
CDH13-212ENST00000569144 COTL1Q14019 142 aa3.45□□□□□ -1.86
CDH13-212ENST00000569144 SMIM15Q7Z3B0 74 aa3.45□□□□□ -1.86
CDH13-212ENST00000569144 NUP35Q8NFH5 326 aa3.45□□□□□ -1.86
CDH13-212ENST00000569144 LINC00526Q96FQ7 95 aa3.45□□□□□ -1.86
CDH13-212ENST00000569144 TMEM191AQ9H0A3 160 aa3.45□□□□□ -1.86
CDH13-212ENST00000569144 A0A087WZ39 114 aa3.44□□□□□ -1.86
CDH13-212ENST00000569144 SDHAF1A6NFY7 115 aa3.44□□□□□ -1.86
CDH13-212ENST00000569144 CRYGAP11844 174 aa3.44□□□□□ -1.86
CDH13-212ENST00000569144 RIGQ13278 110 aa3.44□□□□□ -1.86
CDH13-212ENST00000569144 AMN1Q8IY45 258 aa3.44□□□□□ -1.86
CDH13-212ENST00000569144 BORCS7Q96B45 105 aa3.44□□□□□ -1.86
CDH13-212ENST00000569144 NAT8BQ9UHF3 227 aa3.44□□□□□ -1.86
CDH13-212ENST00000569144 A0A1B0GXF2 115 aa3.43□□□□□ -1.86
CDH13-212ENST00000569144 NCR2O95944 276 aa3.43□□□□□ -1.86
CDH13-212ENST00000569144 RAB4AP20338 218 aa3.43□□□□□ -1.86
CDH13-212ENST00000569144 CAMPP49913 170 aa3.43□□□□□ -1.86
CDH13-212ENST00000569144 POLR2KP53803 58 aaKnown RBP3.43□□□□□ -1.86
CDH13-212ENST00000569144 KRTAP10-6P60371 365 aaPredicted RBP3.43□□□□□ -1.86
CDH13-212ENST00000569144 RAB14P61106 215 aa3.43□□□□□ -1.86
CDH13-212ENST00000569144 RPL24P83731 157 aaKnown RBP3.43□□□□□ -1.86
CDH13-212ENST00000569144 IFITM2Q01629 132 aa3.43□□□□□ -1.86
CDH13-212ENST00000569144 CLLU1Q5K131 121 aa3.43□□□□□ -1.86
CDH13-212ENST00000569144 KRTAP11-1Q8IUC1 163 aa3.43□□□□□ -1.86
CDH13-212ENST00000569144 MRAP2Q96G30 205 aa3.43□□□□□ -1.86
CDH13-212ENST00000569144 IGLV4-69A0A075B6H9 119 aa3.42□□□□□ -1.86
CDH13-212ENST00000569144 TRBV27A0A0K0K1C4 114 aa3.42□□□□□ -1.86
CDH13-212ENST00000569144 A0A1B0GW15 77 aa3.42□□□□□ -1.86
CDH13-212ENST00000569144 SMKR1H3BMG3 65 aa3.42□□□□□ -1.86
CDH13-212ENST00000569144 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.42□□□□□ -1.86
CDH13-212ENST00000569144 H7C423 109 aa3.42□□□□□ -1.86
CDH13-212ENST00000569144 APOMO95445 188 aa3.42□□□□□ -1.86
CDH13-212ENST00000569144 TSHBP01222 138 aa3.42□□□□□ -1.86
CDH13-212ENST00000569144 APCSP02743 223 aa3.42□□□□□ -1.86
CDH13-212ENST00000569144 ESDP10768 282 aa3.42□□□□□ -1.86
CDH13-212ENST00000569144 XCL1P47992 114 aa3.42□□□□□ -1.86
CDH13-212ENST00000569144 RPL18AQ02543 176 aaKnown RBP3.42□□□□□ -1.86
CDH13-212ENST00000569144 FAM104BQ5XKR9 115 aa3.42□□□□□ -1.86
CDH13-212ENST00000569144 RETNLBQ9BQ08 111 aa3.42□□□□□ -1.86
CDH13-212ENST00000569144 ST20Q9HBF5 79 aa3.42□□□□□ -1.86
CDH13-212ENST00000569144 TMEM242Q9NWH2 141 aa3.42□□□□□ -1.86
CDH13-212ENST00000569144 IGLV7-46A0A075B6I9 117 aa3.41□□□□□ -1.86
CDH13-212ENST00000569144 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.41□□□□□ -1.86
CDH13-212ENST00000569144 IGLV5-45A0A087WSX0 123 aa3.41□□□□□ -1.86
CDH13-212ENST00000569144 IGKV2-29A2NJV5 120 aaPredicted RBP3.41□□□□□ -1.86
CDH13-212ENST00000569144 I3L3M4 83 aa3.41□□□□□ -1.86
CDH13-212ENST00000569144 PPP1R2P9O14990 202 aa3.41□□□□□ -1.86
CDH13-212ENST00000569144 CCL25O15444 150 aa3.41□□□□□ -1.86
CDH13-212ENST00000569144 ADCYAP1P18509 176 aa3.41□□□□□ -1.86
CDH13-212ENST00000569144 PMCHP20382 165 aa3.41□□□□□ -1.86
CDH13-212ENST00000569144 HBBP68871 147 aa3.41□□□□□ -1.86
CDH13-212ENST00000569144 PNRC1Q12796 327 aaPredicted RBP3.41□□□□□ -1.86
CDH13-212ENST00000569144 MRPL51Q4U2R6 128 aaKnown RBP3.41□□□□□ -1.86
CDH13-212ENST00000569144 AMMECR1LQ6DCA0 310 aa3.41□□□□□ -1.86
CDH13-212ENST00000569144 MRPL54Q6P161 138 aaKnown RBP3.41□□□□□ -1.86
CDH13-212ENST00000569144 Q75L30 129 aa3.41□□□□□ -1.86
CDH13-212ENST00000569144 OR5A1Q8NGJ0 315 aa3.41□□□□□ -1.86
CDH13-212ENST00000569144 TRBV24-1A0A075B6N3 115 aa3.4□□□□□ -1.87
CDH13-212ENST00000569144 A0A087X002 238 aa3.4□□□□□ -1.87
CDH13-212ENST00000569144 LINC00959A0A1B0GUT2 108 aa3.4□□□□□ -1.87
CDH13-212ENST00000569144 LINC00862A6NCI5 91 aa3.4□□□□□ -1.87
CDH13-212ENST00000569144 PRSS47A8MTI9 375 aa3.4□□□□□ -1.87
CDH13-212ENST00000569144 SCGB1D1O95968 90 aa3.4□□□□□ -1.87
CDH13-212ENST00000569144 PPP1R17O96001 155 aa3.4□□□□□ -1.87
CDH13-212ENST00000569144 MT-ND4LP03901 98 aa3.4□□□□□ -1.87
CDH13-212ENST00000569144 S100A8P05109 93 aa3.4□□□□□ -1.87
CDH13-212ENST00000569144 CFC1BP0CG36 223 aa3.4□□□□□ -1.87
CDH13-212ENST00000569144 CFC1P0CG37 223 aa3.4□□□□□ -1.87
CDH13-212ENST00000569144 ZNF25P17030 456 aaPredicted RBP3.4□□□□□ -1.87
CDH13-212ENST00000569144 RPL32P62910 135 aaKnown RBP3.4□□□□□ -1.87
CDH13-212ENST00000569144 RNASEKQ6P5S7 137 aaKnown RBP3.4□□□□□ -1.87
CDH13-212ENST00000569144 UQCC3Q6UW78 93 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms