RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 hDV102S1A0JD36 115 aa5.97□□□□□ -1.45
CAPN3-219ENST00000569136 K7EMI3 77 aa5.97□□□□□ -1.45
CAPN3-219ENST00000569136 NPYP01303 97 aa5.97□□□□□ -1.45
CAPN3-219ENST00000569136 ADCYAP1P18509 176 aa5.97□□□□□ -1.45
CAPN3-219ENST00000569136 CNBPP62633 177 aaKnown RBP5.97□□□□□ -1.45
CAPN3-219ENST00000569136 CD164L2Q6UWJ8 174 aa5.97□□□□□ -1.45
CAPN3-219ENST00000569136 MAP1LC3AQ9H492 121 aa5.97□□□□□ -1.45
CAPN3-219ENST00000569136 SPANXA1Q9NS26 97 aa5.97□□□□□ -1.45
CAPN3-219ENST00000569136 CARHSP1Q9Y2V2 147 aaKnown RBP5.97□□□□□ -1.45
CAPN3-219ENST00000569136 UBE2D4Q9Y2X8 147 aa5.97□□□□□ -1.45
CAPN3-219ENST00000569136 HSPG2P98160 4391 aa5.96□□□□□ -1.45
CAPN3-219ENST00000569136 RHEBQ15382 184 aa5.96□□□□□ -1.46
CAPN3-219ENST00000569136 Q6ZSA8 131 aa5.96□□□□□ -1.46
CAPN3-219ENST00000569136 C9orf163Q8N9P6 203 aa5.96□□□□□ -1.46
CAPN3-219ENST00000569136 GNB1LQ9BYB4 327 aa5.96□□□□□ -1.46
CAPN3-219ENST00000569136 EPM2AB3EWF7 344 aa5.95□□□□□ -1.46
CAPN3-219ENST00000569136 XCL1P47992 114 aa5.95□□□□□ -1.46
CAPN3-219ENST00000569136 MRPS36P82909 103 aaKnown RBP5.95□□□□□ -1.46
CAPN3-219ENST00000569136 LINC00469Q8N7U9 141 aa5.95□□□□□ -1.46
CAPN3-219ENST00000569136 Q8N8P6 123 aa5.95□□□□□ -1.46
CAPN3-219ENST00000569136 CHAC1Q9BUX1 264 aa5.95□□□□□ -1.46
CAPN3-219ENST00000569136 NXT2Q9NPJ8 142 aaKnown RBP5.95□□□□□ -1.46
CAPN3-219ENST00000569136 PYGO1Q9Y3Y4 419 aa5.95□□□□□ -1.46
CAPN3-219ENST00000569136 IGHV1-58A0A0C4DH39 117 aa5.94□□□□□ -1.46
CAPN3-219ENST00000569136 LOC389332A0A1B0GUA5 103 aa5.94□□□□□ -1.46
CAPN3-219ENST00000569136 SCO1O75880 301 aa5.94□□□□□ -1.46
CAPN3-219ENST00000569136 ORMDL2Q53FV1 153 aa5.94□□□□□ -1.46
CAPN3-219ENST00000569136 SDIM1Q6ZPB5 146 aa5.94□□□□□ -1.46
CAPN3-219ENST00000569136 MPLKIPQ8TAP9 179 aa5.94□□□□□ -1.46
CAPN3-219ENST00000569136 RPS10P5Q9NQ39 176 aa5.94□□□□□ -1.46
CAPN3-219ENST00000569136 APOBP04114 4563 aaKnown RBP5.94□□□□□ -1.46
CAPN3-219ENST00000569136 IGHV3-64A0A075B6Q5 118 aa5.93□□□□□ -1.46
CAPN3-219ENST00000569136 GVQW2A0A096LPI5 108 aaPredicted RBP5.93□□□□□ -1.46
CAPN3-219ENST00000569136 TRAV13-1A0A0B4J241 112 aa5.93□□□□□ -1.46
CAPN3-219ENST00000569136 IGLV5-39A0A0G2JS06 123 aa5.93□□□□□ -1.46
CAPN3-219ENST00000569136 SNAPINO95295 136 aa5.93□□□□□ -1.46
CAPN3-219ENST00000569136 MT-ND6P03923 174 aa5.93□□□□□ -1.46
CAPN3-219ENST00000569136 IGKV2-30P06310 120 aa5.93□□□□□ -1.46
CAPN3-219ENST00000569136 S100A6P06703 90 aa5.93□□□□□ -1.46
CAPN3-219ENST00000569136 IFI27P40305 119 aaPredicted RBP5.93□□□□□ -1.46
CAPN3-219ENST00000569136 SVBPQ8N300 66 aa5.93□□□□□ -1.46
CAPN3-219ENST00000569136 PKIGQ9Y2B9 76 aa5.93□□□□□ -1.46
CAPN3-219ENST00000569136 LINC01549A6NIU2 74 aa5.92□□□□□ -1.46
CAPN3-219ENST00000569136 COX7A2LO14548 114 aa5.92□□□□□ -1.46
CAPN3-219ENST00000569136 APOMO95445 188 aa5.92□□□□□ -1.46
CAPN3-219ENST00000569136 APOC3P02656 99 aa5.92□□□□□ -1.46
CAPN3-219ENST00000569136 RPL39P62891 51 aaKnown RBP5.92□□□□□ -1.46
CAPN3-219ENST00000569136 LINC01620Q4KN68 170 aa5.92□□□□□ -1.46
CAPN3-219ENST00000569136 DPH3Q96FX2 82 aa5.92□□□□□ -1.46
CAPN3-219ENST00000569136 CYSLTR1Q9Y271 337 aa5.92□□□□□ -1.46
CAPN3-219ENST00000569136 F8WDY8 70 aa5.91□□□□□ -1.46
CAPN3-219ENST00000569136 SMR3BP02814 79 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-219ENST00000569136 FABP9Q0Z7S8 132 aa5.91□□□□□ -1.46
CAPN3-219ENST00000569136 PAPPA-AS1Q5QFB9 102 aa5.91□□□□□ -1.46
CAPN3-219ENST00000569136 C15orf56Q8N910 161 aa5.91□□□□□ -1.46
CAPN3-219ENST00000569136 VCX2Q9H322 139 aa5.91□□□□□ -1.46
CAPN3-219ENST00000569136 KIAA1644Q3SXP7 199 aa5.9□□□□□ -1.46
CAPN3-219ENST00000569136 C2orf66Q6UXQ4 117 aa5.9□□□□□ -1.46
CAPN3-219ENST00000569136 Q6ZN92 141 aa5.9□□□□□ -1.46
CAPN3-219ENST00000569136 Q6ZUT4 128 aa5.9□□□□□ -1.46
CAPN3-219ENST00000569136 FAM104AQ969W3 186 aa5.9□□□□□ -1.46
CAPN3-219ENST00000569136 TMEM141Q96I45 108 aa5.9□□□□□ -1.46
CAPN3-219ENST00000569136 LINC00474Q9P2X8 69 aa5.9□□□□□ -1.46
CAPN3-219ENST00000569136 PCP4L1A6NKN8 68 aa5.89□□□□□ -1.47
CAPN3-219ENST00000569136 IFITM10A6NMD0 228 aa5.89□□□□□ -1.47
CAPN3-219ENST00000569136 HIGD2BQ4VC39 106 aa5.89□□□□□ -1.47
CAPN3-219ENST00000569136 RNASE13Q5GAN3 156 aaKnown RBP5.89□□□□□ -1.47
CAPN3-219ENST00000569136 Q5VSD8 79 aa5.89□□□□□ -1.47
CAPN3-219ENST00000569136 SCXQ7RTU7 201 aa5.89□□□□□ -1.47
CAPN3-219ENST00000569136 CIRBP-AS1Q8TBR5 109 aa5.89□□□□□ -1.47
CAPN3-219ENST00000569136 C2orf48Q96LS8 159 aa5.89□□□□□ -1.47
CAPN3-219ENST00000569136 OPRPNQ99935 248 aaPredicted RBP5.89□□□□□ -1.47
CAPN3-219ENST00000569136 C2orf88Q9BSF0 95 aa5.89□□□□□ -1.47
CAPN3-219ENST00000569136 ALKBH7Q9BT30 221 aaPredicted RBP5.89□□□□□ -1.47
CAPN3-219ENST00000569136 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
CAPN3-219ENST00000569136 IGLV4-3A0A075B6K6 122 aa5.88□□□□□ -1.47
CAPN3-219ENST00000569136 IGHV3OR16-9A0A0B4J2B5 98 aa5.88□□□□□ -1.47
CAPN3-219ENST00000569136 LINC01546A6NGU7 62 aa5.88□□□□□ -1.47
CAPN3-219ENST00000569136 IGIPA6NJ69 53 aa5.88□□□□□ -1.47
CAPN3-219ENST00000569136 SMIM6P0DI80 62 aa5.88□□□□□ -1.47
CAPN3-219ENST00000569136 SEC11AP67812 179 aa5.88□□□□□ -1.47
CAPN3-219ENST00000569136 SYCNQ0VAF6 134 aa5.88□□□□□ -1.47
CAPN3-219ENST00000569136 TEX43Q6ZNM6 134 aa5.88□□□□□ -1.47
CAPN3-219ENST00000569136 C5orf38Q86SI9 138 aa5.88□□□□□ -1.47
CAPN3-219ENST00000569136 C12orf57Q99622 126 aa5.88□□□□□ -1.47
CAPN3-219ENST00000569136 TRAPPC1Q9Y5R8 145 aa5.88□□□□□ -1.47
CAPN3-219ENST00000569136 DNAH8Q96JB1 4490 aa5.87□□□□□ -1.47
CAPN3-219ENST00000569136 TGIF2-C20orf24A0A0A6YYL0 155 aa5.87□□□□□ -1.47
CAPN3-219ENST00000569136 INAFM2P0DMQ5 153 aa5.87□□□□□ -1.47
CAPN3-219ENST00000569136 HAMPP81172 84 aa5.87□□□□□ -1.47
CAPN3-219ENST00000569136 COX6A2Q02221 97 aa5.87□□□□□ -1.47
CAPN3-219ENST00000569136 CIRBPQ14011 172 aaKnown RBP5.87□□□□□ -1.47
CAPN3-219ENST00000569136 ERASQ7Z444 233 aa5.87□□□□□ -1.47
CAPN3-219ENST00000569136 LINC01561Q8N1V8 128 aa5.87□□□□□ -1.47
CAPN3-219ENST00000569136 OR10D4PQ8NGN7 298 aa5.87□□□□□ -1.47
CAPN3-219ENST00000569136 TOMM6Q96B49 74 aa5.87□□□□□ -1.47
CAPN3-219ENST00000569136 AMELXQ99217 191 aa5.87□□□□□ -1.47
CAPN3-219ENST00000569136 TIMM17AQ99595 171 aa5.87□□□□□ -1.47
CAPN3-219ENST00000569136 FAT1Q14517 4588 aa5.87□□□□□ -1.47
CAPN3-219ENST00000569136 SRRM2Q9UQ35 2752 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms