RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 PPP1R17O96001 155 aa6.98□□□□□ -1.29
GTF3C1-209ENST00000568569 RAB4AP20338 218 aa6.98□□□□□ -1.29
GTF3C1-209ENST00000568569 CT83Q5H943 113 aa6.98□□□□□ -1.29
GTF3C1-209ENST00000568569 UNQ6190/PRO20217Q6UXQ8 127 aa6.98□□□□□ -1.29
GTF3C1-209ENST00000568569 FAM231DQ6ZW35 169 aa6.98□□□□□ -1.29
GTF3C1-209ENST00000568569 AMN1Q8IY45 258 aa6.98□□□□□ -1.29
GTF3C1-209ENST00000568569 TMEM18Q96B42 140 aa6.98□□□□□ -1.29
GTF3C1-209ENST00000568569 TIMM21Q9BVV7 248 aa6.98□□□□□ -1.29
GTF3C1-209ENST00000568569 SUMO2P61956 95 aaKnown RBP6.97□□□□□ -1.29
GTF3C1-209ENST00000568569 HIGD1CA8MV81 97 aa6.96□□□□□ -1.3
GTF3C1-209ENST00000568569 SMKR1H3BMG3 65 aa6.96□□□□□ -1.3
GTF3C1-209ENST00000568569 NRACQ8N912 160 aa6.96□□□□□ -1.3
GTF3C1-209ENST00000568569 SLC51BQ86UW2 128 aa6.95□□□□□ -1.3
GTF3C1-209ENST00000568569 A0A087X002 238 aa6.94□□□□□ -1.3
GTF3C1-209ENST00000568569 TRBV30A0A0K0K1B3 111 aa6.94□□□□□ -1.3
GTF3C1-209ENST00000568569 NDUFC2-KCTD14E9PQ53 114 aa6.94□□□□□ -1.3
GTF3C1-209ENST00000568569 PPP1R2P9O14990 202 aa6.94□□□□□ -1.3
GTF3C1-209ENST00000568569 NUPR1O60356 82 aa6.94□□□□□ -1.3
GTF3C1-209ENST00000568569 C9orf129Q5T035 196 aaKnown RBP6.94□□□□□ -1.3
GTF3C1-209ENST00000568569 ALKAL2Q6UX46 152 aa6.94□□□□□ -1.3
GTF3C1-209ENST00000568569 TYMSOSQ8TAI1 123 aa6.94□□□□□ -1.3
GTF3C1-209ENST00000568569 IFITM10A6NMD0 228 aa6.93□□□□□ -1.3
GTF3C1-209ENST00000568569 TMEM250H0YL14 139 aa6.93□□□□□ -1.3
GTF3C1-209ENST00000568569 CRYGAP11844 174 aa6.93□□□□□ -1.3
GTF3C1-209ENST00000568569 HBBP68871 147 aa6.93□□□□□ -1.3
GTF3C1-209ENST00000568569 SPANXA1Q9NS26 97 aa6.93□□□□□ -1.3
GTF3C1-209ENST00000568569 TGIF2-C20orf24A0A0A6YYL0 155 aa6.92□□□□□ -1.3
GTF3C1-209ENST00000568569 TCAPO15273 167 aa6.92□□□□□ -1.3
GTF3C1-209ENST00000568569 RPL39P62891 51 aaKnown RBP6.92□□□□□ -1.3
GTF3C1-209ENST00000568569 MRPS36P82909 103 aaKnown RBP6.92□□□□□ -1.3
GTF3C1-209ENST00000568569 RIGQ13278 110 aa6.92□□□□□ -1.3
GTF3C1-209ENST00000568569 KIAA0087Q14695 138 aa6.92□□□□□ -1.3
GTF3C1-209ENST00000568569 FAM104AQ969W3 186 aa6.92□□□□□ -1.3
GTF3C1-209ENST00000568569 PACRGQ96M98 296 aaPredicted RBP6.92□□□□□ -1.3
GTF3C1-209ENST00000568569 CDIP1Q9H305 208 aa6.92□□□□□ -1.3
GTF3C1-209ENST00000568569 TPRXLQ17RH7 258 aa6.91□□□□□ -1.3
GTF3C1-209ENST00000568569 C20orf78Q9BR46 151 aa6.91□□□□□ -1.3
GTF3C1-209ENST00000568569 CTDSP1Q9GZU7 261 aa6.91□□□□□ -1.3
GTF3C1-209ENST00000568569 MUC17Q685J3 4493 aa6.91□□□□□ -1.3
GTF3C1-209ENST00000568569 RPL28P46779 137 aaKnown RBP6.9□□□□□ -1.3
GTF3C1-209ENST00000568569 RPL32P62910 135 aaKnown RBP6.9□□□□□ -1.3
GTF3C1-209ENST00000568569 LBHQ53QV2 105 aaPredicted RBP6.9□□□□□ -1.3
GTF3C1-209ENST00000568569 C2orf82Q6UX34 121 aa6.9□□□□□ -1.3
GTF3C1-209ENST00000568569 RETNLBQ9BQ08 111 aa6.9□□□□□ -1.3
GTF3C1-209ENST00000568569 C22orf24Q9Y442 160 aa6.9□□□□□ -1.3
GTF3C1-209ENST00000568569 CEBPGP53567 150 aa6.89□□□□□ -1.31
GTF3C1-209ENST00000568569 MRPL51Q4U2R6 128 aaKnown RBP6.89□□□□□ -1.31
GTF3C1-209ENST00000568569 TRBV24-1A0A075B6N3 115 aa6.88□□□□□ -1.31
GTF3C1-209ENST00000568569 LINC00862A6NCI5 91 aa6.88□□□□□ -1.31
GTF3C1-209ENST00000568569 BCE1O60756 84 aa6.88□□□□□ -1.31
GTF3C1-209ENST00000568569 FAM104BQ5XKR9 115 aa6.88□□□□□ -1.31
GTF3C1-209ENST00000568569 LINC01551Q86U37 167 aa6.88□□□□□ -1.31
GTF3C1-209ENST00000568569 OSTCQ9NRP0 149 aa6.88□□□□□ -1.31
GTF3C1-209ENST00000568569 ZNF727A8MUV8 499 aa6.87□□□□□ -1.31
GTF3C1-209ENST00000568569 LINC00242Q5T6M2 205 aa6.87□□□□□ -1.31
GTF3C1-209ENST00000568569 SMIM7Q9BQ49 75 aa6.87□□□□□ -1.31
GTF3C1-209ENST00000568569 SMIM2Q9BVW6 85 aa6.87□□□□□ -1.31
GTF3C1-209ENST00000568569 IGLV7-46A0A075B6I9 117 aa6.86□□□□□ -1.31
GTF3C1-209ENST00000568569 TNFRSF6BO95407 300 aa6.86□□□□□ -1.31
GTF3C1-209ENST00000568569 CKS2P33552 79 aa6.86□□□□□ -1.31
GTF3C1-209ENST00000568569 IFI27P40305 119 aaPredicted RBP6.86□□□□□ -1.31
GTF3C1-209ENST00000568569 MRPL55Q7Z7F7 128 aaKnown RBP6.86□□□□□ -1.31
GTF3C1-209ENST00000568569 LINC00469Q8N7U9 141 aa6.86□□□□□ -1.31
GTF3C1-209ENST00000568569 LINC00304Q8N9R0 145 aa6.86□□□□□ -1.31
GTF3C1-209ENST00000568569 XAGE1AQ9HD64 81 aa6.86□□□□□ -1.31
GTF3C1-209ENST00000568569 TP73-AS1Q9UF72 201 aa6.86□□□□□ -1.31
GTF3C1-209ENST00000568569 PRSS2P07478 247 aa6.85□□□□□ -1.31
GTF3C1-209ENST00000568569 CKS1BP61024 79 aa6.85□□□□□ -1.31
GTF3C1-209ENST00000568569 LINC00173Q6ZV60 143 aa6.85□□□□□ -1.31
GTF3C1-209ENST00000568569 LINC01561Q8N1V8 128 aa6.85□□□□□ -1.31
GTF3C1-209ENST00000568569 ANAPC11Q9NYG5 84 aa6.85□□□□□ -1.31
GTF3C1-209ENST00000568569 NAT8BQ9UHF3 227 aa6.85□□□□□ -1.31
GTF3C1-209ENST00000568569 V9GYV3 84 aa6.85□□□□□ -1.31
GTF3C1-209ENST00000568569 KRTAP13-2Q52LG2 175 aa6.84□□□□□ -1.31
GTF3C1-209ENST00000568569 PYGO1Q9Y3Y4 419 aa6.84□□□□□ -1.31
GTF3C1-209ENST00000568569 FSIP2Q5CZC0 6907 aa6.83□□□□□ -1.32
GTF3C1-209ENST00000568569 IGLV4-3A0A075B6K6 122 aa6.83□□□□□ -1.32
GTF3C1-209ENST00000568569 FAM229BQ4G0N7 80 aa6.83□□□□□ -1.32
GTF3C1-209ENST00000568569 TMEM141Q96I45 108 aa6.83□□□□□ -1.32
GTF3C1-209ENST00000568569 TOMM7Q9P0U1 55 aa6.83□□□□□ -1.32
GTF3C1-209ENST00000568569 D6R8Y8 96 aa6.82□□□□□ -1.32
GTF3C1-209ENST00000568569 CTAG1AP78358 180 aa6.82□□□□□ -1.32
GTF3C1-209ENST00000568569 C6orf226Q5I0X4 101 aa6.82□□□□□ -1.32
GTF3C1-209ENST00000568569 Q6ZN92 141 aa6.82□□□□□ -1.32
GTF3C1-209ENST00000568569 TEX43Q6ZNM6 134 aa6.82□□□□□ -1.32
GTF3C1-209ENST00000568569 C2orf88Q9BSF0 95 aa6.82□□□□□ -1.32
GTF3C1-209ENST00000568569 CRCT1Q9UGL9 99 aa6.82□□□□□ -1.32
GTF3C1-209ENST00000568569 A0A1B0GW15 77 aa6.81□□□□□ -1.32
GTF3C1-209ENST00000568569 NPYP01303 97 aa6.81□□□□□ -1.32
GTF3C1-209ENST00000568569 RAB5AP20339 215 aa6.81□□□□□ -1.32
GTF3C1-209ENST00000568569 BLOC1S1P78537 153 aa6.81□□□□□ -1.32
GTF3C1-209ENST00000568569 FAM74A3Q4VXF1 159 aa6.81□□□□□ -1.32
GTF3C1-209ENST00000568569 Q8IZM0 81 aa6.81□□□□□ -1.32
GTF3C1-209ENST00000568569 EIF5A2Q9GZV4 153 aaKnown RBP6.81□□□□□ -1.32
GTF3C1-209ENST00000568569 IGKV2D-26A0A0A0MRZ7 120 aa6.8□□□□□ -1.32
GTF3C1-209ENST00000568569 RPL37AP8A6NKH3 93 aa6.8□□□□□ -1.32
GTF3C1-209ENST00000568569 F8W036 122 aa6.8□□□□□ -1.32
GTF3C1-209ENST00000568569 UBE2AP49459 152 aa6.8□□□□□ -1.32
GTF3C1-209ENST00000568569 LINC01547P58512 204 aaPredicted RBP6.8□□□□□ -1.32
GTF3C1-209ENST00000568569 KRTAP13-1Q8IUC0 172 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms