RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ANAPC16Q96DE5 110 aa9.5□□□□□ -0.89
NME3-211ENST00000568561 CTDSP1Q9GZU7 261 aa9.5□□□□□ -0.89
NME3-211ENST00000568561 UBE2D4Q9Y2X8 147 aa9.5□□□□□ -0.89
NME3-211ENST00000568561 V9GYV3 84 aa9.5□□□□□ -0.89
NME3-211ENST00000568561 SPAG11BQ08648 103 aa9.49□□□□□ -0.89
NME3-211ENST00000568561 C1orf137Q5JT78 98 aa9.49□□□□□ -0.89
NME3-211ENST00000568561 VCYO14598 125 aa9.48□□□□□ -0.89
NME3-211ENST00000568561 NRACQ8N912 160 aa9.48□□□□□ -0.89
NME3-211ENST00000568561 SUMO2P61956 95 aaKnown RBP9.47□□□□□ -0.89
NME3-211ENST00000568561 C2orf48Q96LS8 159 aa9.47□□□□□ -0.89
NME3-211ENST00000568561 RPS10P5Q9NQ39 176 aa9.47□□□□□ -0.89
NME3-211ENST00000568561 PRR26Q8N8Z3 221 aa9.46□□□□□ -0.9
NME3-211ENST00000568561 FAM168BA1KXE4 195 aa9.45□□□□□ -0.9
NME3-211ENST00000568561 KRTAP11-1Q8IUC1 163 aa9.45□□□□□ -0.9
NME3-211ENST00000568561 IMMP2LQ96T52 175 aa9.45□□□□□ -0.9
NME3-211ENST00000568561 KIR2DL4Q99706 377 aa9.45□□□□□ -0.9
NME3-211ENST00000568561 CSDC2Q9Y534 153 aaKnown RBP9.45□□□□□ -0.9
NME3-211ENST00000568561 SMIM27A0A1W2PRY6 76 aa9.44□□□□□ -0.9
NME3-211ENST00000568561 RPL39P62891 51 aaKnown RBP9.44□□□□□ -0.9
NME3-211ENST00000568561 RIGQ13278 110 aa9.44□□□□□ -0.9
NME3-211ENST00000568561 ORAOV1Q8WV07 137 aa9.44□□□□□ -0.9
NME3-211ENST00000568561 IGLV7-43P04211 117 aa9.43□□□□□ -0.9
NME3-211ENST00000568561 SMAGPQ0VAQ4 97 aa9.43□□□□□ -0.9
NME3-211ENST00000568561 MRPL51Q4U2R6 128 aaKnown RBP9.43□□□□□ -0.9
NME3-211ENST00000568561 C10orf25Q5T742 122 aa9.42□□□□□ -0.9
NME3-211ENST00000568561 FAM19A5Q7Z5A7 132 aaPredicted RBP9.42□□□□□ -0.9
NME3-211ENST00000568561 OR10D4PQ8NGN7 298 aa9.42□□□□□ -0.9
NME3-211ENST00000568561 FAM104AQ969W3 186 aa9.42□□□□□ -0.9
NME3-211ENST00000568561 A0A087WZ39 114 aa9.41□□□□□ -0.9
NME3-211ENST00000568561 PPP1R17O96001 155 aa9.41□□□□□ -0.9
NME3-211ENST00000568561 RNF151Q2KHN1 245 aa9.41□□□□□ -0.9
NME3-211ENST00000568561 TIMM21Q9BVV7 248 aa9.41□□□□□ -0.9
NME3-211ENST00000568561 SMCO4Q9NRQ5 59 aa9.41□□□□□ -0.9
NME3-211ENST00000568561 FAM104BQ5XKR9 115 aa9.4□□□□□ -0.9
NME3-211ENST00000568561 DIRC1Q969H9 104 aa9.4□□□□□ -0.9
NME3-211ENST00000568561 TMEM18Q96B42 140 aa9.4□□□□□ -0.9
NME3-211ENST00000568561 MRPL35Q9NZE8 188 aaKnown RBP9.4□□□□□ -0.9
NME3-211ENST00000568561 NAT8BQ9UHF3 227 aa9.4□□□□□ -0.9
NME3-211ENST00000568561 MUC2Q02817 5179 aa9.4□□□□□ -0.91
NME3-211ENST00000568561 TRAV9-1A0A075B6T8 112 aa9.39□□□□□ -0.91
NME3-211ENST00000568561 H0Y9J4 135 aa9.39□□□□□ -0.91
NME3-211ENST00000568561 NDUFA1O15239 70 aa9.39□□□□□ -0.91
NME3-211ENST00000568561 SCO1O75880 301 aa9.39□□□□□ -0.91
NME3-211ENST00000568561 GAGE2EQ4V326 116 aa9.39□□□□□ -0.91
NME3-211ENST00000568561 UNQ6190/PRO20217Q6UXQ8 127 aa9.39□□□□□ -0.91
NME3-211ENST00000568561 CBLN2Q8IUK8 224 aa9.39□□□□□ -0.91
NME3-211ENST00000568561 YPEL4Q96NS1 127 aa9.39□□□□□ -0.91
NME3-211ENST00000568561 C6orf48Q9UBA6 75 aa9.39□□□□□ -0.91
NME3-211ENST00000568561 GAGE2DQ9UEU5 116 aa9.39□□□□□ -0.91
NME3-211ENST00000568561 IGHV3OR16-9A0A0B4J2B5 98 aa9.38□□□□□ -0.91
NME3-211ENST00000568561 S100PP25815 95 aa9.38□□□□□ -0.91
NME3-211ENST00000568561 IFITM10A6NMD0 228 aa9.37□□□□□ -0.91
NME3-211ENST00000568561 CKS2P33552 79 aa9.37□□□□□ -0.91
NME3-211ENST00000568561 KRTAP7-1Q8IUC3 87 aa9.37□□□□□ -0.91
NME3-211ENST00000568561 C20orf78Q9BR46 151 aa9.37□□□□□ -0.91
NME3-211ENST00000568561 SMIM2Q9BVW6 85 aa9.37□□□□□ -0.91
NME3-211ENST00000568561 TRBV24-1A0A075B6N3 115 aa9.36□□□□□ -0.91
NME3-211ENST00000568561 TCAPO15273 167 aa9.36□□□□□ -0.91
NME3-211ENST00000568561 TNFRSF6BO95407 300 aa9.36□□□□□ -0.91
NME3-211ENST00000568561 SPANXA1Q9NS26 97 aa9.36□□□□□ -0.91
NME3-211ENST00000568561 D6R8Y8 96 aa9.35□□□□□ -0.91
NME3-211ENST00000568561 NPYP01303 97 aa9.35□□□□□ -0.91
NME3-211ENST00000568561 KRTAP1-4P0C5Y4 121 aa9.35□□□□□ -0.91
NME3-211ENST00000568561 HBBP68871 147 aa9.35□□□□□ -0.91
NME3-211ENST00000568561 ATP5L2Q7Z4Y8 100 aa9.35□□□□□ -0.91
NME3-211ENST00000568561 A0A1B0GXF2 115 aa9.34□□□□□ -0.91
NME3-211ENST00000568561 M0QXV9 152 aa9.34□□□□□ -0.91
NME3-211ENST00000568561 TLX1NBP0CAT3 122 aa9.34□□□□□ -0.91
NME3-211ENST00000568561 RPL32P62910 135 aaKnown RBP9.34□□□□□ -0.91
NME3-211ENST00000568561 UBE2BP63146 152 aa9.34□□□□□ -0.91
NME3-211ENST00000568561 MRPL54Q6P161 138 aaKnown RBP9.34□□□□□ -0.91
NME3-211ENST00000568561 TGIF2-C20orf24A0A0A6YYL0 155 aa9.33□□□□□ -0.92
NME3-211ENST00000568561 A0A1B0GW15 77 aa9.33□□□□□ -0.92
NME3-211ENST00000568561 COLCA2A8K830 154 aa9.33□□□□□ -0.92
NME3-211ENST00000568561 F8WDY8 70 aa9.33□□□□□ -0.92
NME3-211ENST00000568561 MRPS36P82909 103 aaKnown RBP9.33□□□□□ -0.92
NME3-211ENST00000568561 C2orf82Q6UX34 121 aa9.33□□□□□ -0.92
NME3-211ENST00000568561 KIAA0087Q14695 138 aa9.32□□□□□ -0.92
NME3-211ENST00000568561 IGLV1-50A0A075B6I6 118 aa9.31□□□□□ -0.92
NME3-211ENST00000568561 S100A8P05109 93 aa9.31□□□□□ -0.92
NME3-211ENST00000568561 PRR4Q16378 134 aa9.31□□□□□ -0.92
NME3-211ENST00000568561 COX19Q49B96 90 aa9.31□□□□□ -0.92
NME3-211ENST00000568561 UBE2D1P51668 147 aa9.3□□□□□ -0.92
NME3-211ENST00000568561 C9orf129Q5T035 196 aaKnown RBP9.3□□□□□ -0.92
NME3-211ENST00000568561 LINC00242Q5T6M2 205 aa9.3□□□□□ -0.92
NME3-211ENST00000568561 GNB1LQ9BYB4 327 aa9.29□□□□□ -0.92
NME3-211ENST00000568561 IGLV4-3A0A075B6K6 122 aa9.28□□□□□ -0.92
NME3-211ENST00000568561 IFI27P40305 119 aaPredicted RBP9.28□□□□□ -0.92
NME3-211ENST00000568561 ZC2HC1BQ5TFG8 222 aa9.28□□□□□ -0.92
NME3-211ENST00000568561 TMEM136Q6ZRR5 245 aa9.28□□□□□ -0.92
NME3-211ENST00000568561 TRBV30A0A0K0K1B3 111 aa9.27□□□□□ -0.93
NME3-211ENST00000568561 NDUFC2-KCTD14E9PQ53 114 aa9.27□□□□□ -0.93
NME3-211ENST00000568561 RAB5AP20339 215 aa9.27□□□□□ -0.93
NME3-211ENST00000568561 LINC00469Q8N7U9 141 aa9.26□□□□□ -0.93
NME3-211ENST00000568561 PACRGQ96M98 296 aaPredicted RBP9.26□□□□□ -0.93
NME3-211ENST00000568561 ORMDL3Q8N138 153 aa9.25□□□□□ -0.93
NME3-211ENST00000568561 TMEM141Q96I45 108 aa9.25□□□□□ -0.93
NME3-211ENST00000568561 PRELID3AQ96N28 172 aa9.25□□□□□ -0.93
NME3-211ENST00000568561 PPBPP02775 128 aa9.24□□□□□ -0.93
NME3-211ENST00000568561 RPL13AP40429 203 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 182.4 ms