RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 RNASE7Q9H1E1 156 aaKnown RBP3□□□□□ -1.93
HERPUD1-213ENST00000568358 TRAV26-2A0A0B4J265 109 aa2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 TMEM250H0YL14 139 aa2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 I3L3M4 83 aa2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 PPP1R17O96001 155 aa2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 ZNF25P17030 456 aaPredicted RBP2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 RAB5AP20339 215 aa2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 CTRLP40313 264 aa2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 SS18Q15532 418 aa2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 PDZD11Q5EBL8 140 aa2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 Q6ZRU5 148 aa2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 GATD1Q8NB37 220 aa2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 CHCHD10Q8WYQ3 142 aaPredicted RBP2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 CNFNQ9BYD5 112 aa2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 ST20Q9HBF5 79 aa2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 SPANXB1Q9NS25 103 aaPredicted RBP2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 LINC00474Q9P2X8 69 aa2.99□□□□□ -1.93
HERPUD1-213ENST00000568358 VPS13BQ7Z7G8 4022 aa2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 TRBV20OR9-2A0A075B6H5 130 aa2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 IGKV2-29A2NJV5 120 aaPredicted RBP2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 SDHAF1A6NFY7 115 aa2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 FGF6P10767 208 aa2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 FCER1GP30273 86 aa2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 COX6A2Q02221 97 aa2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 KRTAP26-1Q6PEX3 210 aa2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 FAM231DQ6ZW35 169 aa2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 FAM19A5Q7Z5A7 132 aaPredicted RBP2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 MTURNQ8N3F0 131 aa2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 OR5A1Q8NGJ0 315 aa2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 GTSF1Q8WW33 167 aa2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 RPL39LQ96EH5 51 aaKnown RBP2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 MRAP2Q96G30 205 aa2.98□□□□□ -1.93
HERPUD1-213ENST00000568358 FAT1Q14517 4588 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 A0A087WYN8 130 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 IGHV1-58A0A0C4DH39 117 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 IGKV2-24A0A0C4DH68 120 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 A0A1B0GUT8 65 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 ZNF727A8MUV8 499 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 CCL25O15444 150 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 PRSS2P07478 247 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 G0S2P27469 103 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 XCL1P47992 114 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 FOXA3P55318 350 aaPredicted RBP2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 KIAA1644Q3SXP7 199 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 HIGD2BQ4VC39 106 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 ALKAL2Q6UX46 152 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 NOTCH2NLQ7Z3S9 236 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 TSKUQ8WUA8 353 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 KIR2DL4Q99706 377 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 SMIM7Q9BQ49 75 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 GFRA4Q9GZZ7 299 aa2.97□□□□□ -1.93
HERPUD1-213ENST00000568358 GVQW2A0A096LPI5 108 aaPredicted RBP2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 TRBV6-5A0A0K0K1A5 114 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 LINC00959A0A1B0GUT2 108 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 TINCRA0A1B0GVN0 87 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 C7orf77A4D0Y5 90 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 HIGD1CA8MV81 97 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 C1orf196B1AJZ1 125 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 E9PLD3 99 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 SLPIP03973 132 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 CHTF8P0CG12 524 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 KRTAP10-4P60372 401 aaPredicted RBP2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 CIRBPQ14011 172 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 TMEM241Q24JQ0 296 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 KRTAP5-3Q6L8H2 238 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 ZNF664Q8N3J9 261 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 STPG4Q8N801 248 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 C15orf56Q8N910 161 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 PRSS3P2Q8NHM4 247 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 SPACA4Q8TDM5 124 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 TMEM191AQ9H0A3 160 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 OSTCQ9NRP0 149 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 PLAC8Q9NZF1 115 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 HERC1Q15751 4861 aa2.96□□□□□ -1.94
HERPUD1-213ENST00000568358 TRBV27A0A0K0K1C4 114 aa2.95□□□□□ -1.94
HERPUD1-213ENST00000568358 PANO1I0J062 215 aa2.95□□□□□ -1.94
HERPUD1-213ENST00000568358 COX7A2LO14548 114 aa2.95□□□□□ -1.94
HERPUD1-213ENST00000568358 PHOX2AO14813 284 aa2.95□□□□□ -1.94
HERPUD1-213ENST00000568358 TCAPO15273 167 aa2.95□□□□□ -1.94
HERPUD1-213ENST00000568358 SNAPINO95295 136 aa2.95□□□□□ -1.94
HERPUD1-213ENST00000568358 APOMO95445 188 aa2.95□□□□□ -1.94
HERPUD1-213ENST00000568358 PFN2P35080 140 aa2.95□□□□□ -1.94
HERPUD1-213ENST00000568358 SYCNQ0VAF6 134 aa2.95□□□□□ -1.94
HERPUD1-213ENST00000568358 REG3GQ6UW15 175 aa2.95□□□□□ -1.94
HERPUD1-213ENST00000568358 LINC01551Q86U37 167 aa2.95□□□□□ -1.94
HERPUD1-213ENST00000568358 CARD19Q96LW7 228 aa2.95□□□□□ -1.94
HERPUD1-213ENST00000568358 CDC42SE2Q9NRR3 84 aa2.95□□□□□ -1.94
HERPUD1-213ENST00000568358 TMEM242Q9NWH2 141 aa2.95□□□□□ -1.94
HERPUD1-213ENST00000568358 NAT8BQ9UHF3 227 aa2.95□□□□□ -1.94
HERPUD1-213ENST00000568358 TRAV13-1A0A0B4J241 112 aa2.94□□□□□ -1.94
HERPUD1-213ENST00000568358 LOC107984640A0A0U1RRK4 108 aa2.94□□□□□ -1.94
HERPUD1-213ENST00000568358 LINC00862A6NCI5 91 aa2.94□□□□□ -1.94
HERPUD1-213ENST00000568358 F8W036 122 aa2.94□□□□□ -1.94
HERPUD1-213ENST00000568358 S100A8P05109 93 aa2.94□□□□□ -1.94
HERPUD1-213ENST00000568358 ESDP10768 282 aa2.94□□□□□ -1.94
HERPUD1-213ENST00000568358 CKS2P33552 79 aa2.94□□□□□ -1.94
HERPUD1-213ENST00000568358 POLR2KP53803 58 aaKnown RBP2.94□□□□□ -1.94
HERPUD1-213ENST00000568358 PRR3P79522 188 aaKnown RBP2.94□□□□□ -1.94
HERPUD1-213ENST00000568358 PEA15Q15121 130 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms