RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 TMEM18Q96B42 140 aa6.05□□□□□ -1.44
SF3B3-211ENST00000568291 TIMM21Q9BVV7 248 aa6.05□□□□□ -1.44
SF3B3-211ENST00000568291 IGLV4-69A0A075B6H9 119 aa6.04□□□□□ -1.44
SF3B3-211ENST00000568291 A0A087WYN8 130 aa6.04□□□□□ -1.44
SF3B3-211ENST00000568291 IGHV1-58A0A0C4DH39 117 aa6.04□□□□□ -1.44
SF3B3-211ENST00000568291 IFITM10A6NMD0 228 aa6.04□□□□□ -1.44
SF3B3-211ENST00000568291 COX7A2LO14548 114 aa6.04□□□□□ -1.44
SF3B3-211ENST00000568291 MALP21145 153 aa6.04□□□□□ -1.44
SF3B3-211ENST00000568291 Q8N8P6 123 aa6.04□□□□□ -1.44
SF3B3-211ENST00000568291 PKHD1L1Q86WI1 4243 aa6.03□□□□□ -1.44
SF3B3-211ENST00000568291 IGLV4-3A0A075B6K6 122 aa6.03□□□□□ -1.44
SF3B3-211ENST00000568291 A0A0J9YXV3 536 aa6.03□□□□□ -1.44
SF3B3-211ENST00000568291 PRSS47A8MTI9 375 aa6.03□□□□□ -1.44
SF3B3-211ENST00000568291 ZNF561-AS1K7EIQ3 104 aa6.03□□□□□ -1.44
SF3B3-211ENST00000568291 SMAGPQ0VAQ4 97 aa6.03□□□□□ -1.44
SF3B3-211ENST00000568291 MAJINQ3KP22 176 aa6.03□□□□□ -1.44
SF3B3-211ENST00000568291 C10orf91Q5T1B1 145 aa6.03□□□□□ -1.44
SF3B3-211ENST00000568291 SPANXA1Q9NS26 97 aa6.03□□□□□ -1.44
SF3B3-211ENST00000568291 PLA2G2DQ9UNK4 145 aa6.03□□□□□ -1.44
SF3B3-211ENST00000568291 A0A096LNI7 61 aa6.02□□□□□ -1.45
SF3B3-211ENST00000568291 TGIF2-C20orf24A0A0A6YYL0 155 aa6.02□□□□□ -1.45
SF3B3-211ENST00000568291 APOC3P02656 99 aa6.02□□□□□ -1.45
SF3B3-211ENST00000568291 S100PP25815 95 aa6.02□□□□□ -1.45
SF3B3-211ENST00000568291 HNRNPA3P51991 378 aaKnown RBP6.02□□□□□ -1.45
SF3B3-211ENST00000568291 RPL37AP61513 92 aaKnown RBP6.02□□□□□ -1.45
SF3B3-211ENST00000568291 SYCNQ0VAF6 134 aa6.02□□□□□ -1.45
SF3B3-211ENST00000568291 C2orf66Q6UXQ4 117 aa6.02□□□□□ -1.45
SF3B3-211ENST00000568291 Q6ZRU5 148 aa6.02□□□□□ -1.45
SF3B3-211ENST00000568291 SPACA4Q8TDM5 124 aa6.02□□□□□ -1.45
SF3B3-211ENST00000568291 CARD19Q96LW7 228 aa6.02□□□□□ -1.45
SF3B3-211ENST00000568291 CARHSP1Q9Y2V2 147 aaKnown RBP6.02□□□□□ -1.45
SF3B3-211ENST00000568291 MRPS36P82909 103 aaKnown RBP6.01□□□□□ -1.45
SF3B3-211ENST00000568291 FABP9Q0Z7S8 132 aa6.01□□□□□ -1.45
SF3B3-211ENST00000568291 LAMTOR2Q9Y2Q5 125 aa6.01□□□□□ -1.45
SF3B3-211ENST00000568291 LRP1Q07954 4544 aaKnown RBP6□□□□□ -1.45
SF3B3-211ENST00000568291 IGHV3OR16-9A0A0B4J2B5 98 aa6□□□□□ -1.45
SF3B3-211ENST00000568291 SPAG11BQ08648 103 aa6□□□□□ -1.45
SF3B3-211ENST00000568291 GAGE2BQ13066 116 aa6□□□□□ -1.45
SF3B3-211ENST00000568291 CIRBPQ14011 172 aaKnown RBP6□□□□□ -1.45
SF3B3-211ENST00000568291 LINC00242Q5T6M2 205 aa6□□□□□ -1.45
SF3B3-211ENST00000568291 C10orf25Q5T742 122 aa6□□□□□ -1.45
SF3B3-211ENST00000568291 LINC00173Q6ZV60 143 aa6□□□□□ -1.45
SF3B3-211ENST00000568291 STPG4Q8N801 248 aa6□□□□□ -1.45
SF3B3-211ENST00000568291 ORAOV1Q8WV07 137 aa6□□□□□ -1.45
SF3B3-211ENST00000568291 TMEM141Q96I45 108 aa6□□□□□ -1.45
SF3B3-211ENST00000568291 CAMK2N2Q96S95 79 aa6□□□□□ -1.45
SF3B3-211ENST00000568291 ALKBH7Q9BT30 221 aaPredicted RBP6□□□□□ -1.45
SF3B3-211ENST00000568291 GNB1LQ9BYB4 327 aa6□□□□□ -1.45
SF3B3-211ENST00000568291 CYSLTR1Q9Y271 337 aa6□□□□□ -1.45
SF3B3-211ENST00000568291 HMCN2Q8NDA2 5059 aa5.99□□□□□ -1.45
SF3B3-211ENST00000568291 TRAV9-1A0A075B6T8 112 aa5.99□□□□□ -1.45
SF3B3-211ENST00000568291 IGIPA6NJ69 53 aa5.99□□□□□ -1.45
SF3B3-211ENST00000568291 RHEBQ15382 184 aa5.99□□□□□ -1.45
SF3B3-211ENST00000568291 UNQ6190/PRO20217Q6UXQ8 127 aa5.99□□□□□ -1.45
SF3B3-211ENST00000568291 TEX43Q6ZNM6 134 aa5.99□□□□□ -1.45
SF3B3-211ENST00000568291 VCX2Q9H322 139 aa5.99□□□□□ -1.45
SF3B3-211ENST00000568291 NXT2Q9NPJ8 142 aaKnown RBP5.99□□□□□ -1.45
SF3B3-211ENST00000568291 PYGO1Q9Y3Y4 419 aa5.99□□□□□ -1.45
SF3B3-211ENST00000568291 UBE2D1P51668 147 aa5.98□□□□□ -1.45
SF3B3-211ENST00000568291 ORMDL2Q53FV1 153 aa5.98□□□□□ -1.45
SF3B3-211ENST00000568291 SLC7A5P1Q8MH63 180 aa5.98□□□□□ -1.45
SF3B3-211ENST00000568291 FAT3Q8TDW7 4589 aa5.98□□□□□ -1.45
SF3B3-211ENST00000568291 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.97□□□□□ -1.45
SF3B3-211ENST00000568291 APOMO95445 188 aa5.97□□□□□ -1.45
SF3B3-211ENST00000568291 C2orf82Q6UX34 121 aa5.97□□□□□ -1.45
SF3B3-211ENST00000568291 SCGB3A1Q96QR1 104 aa5.97□□□□□ -1.45
SF3B3-211ENST00000568291 KRTAP9-2Q9BYQ4 174 aa5.97□□□□□ -1.45
SF3B3-211ENST00000568291 PLAC8Q9NZF1 115 aa5.97□□□□□ -1.45
SF3B3-211ENST00000568291 TRAPPC1Q9Y5R8 145 aa5.97□□□□□ -1.45
SF3B3-211ENST00000568291 A0A1W2PNN7 141 aa5.96□□□□□ -1.46
SF3B3-211ENST00000568291 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.96□□□□□ -1.46
SF3B3-211ENST00000568291 RPL18AQ02543 176 aaKnown RBP5.96□□□□□ -1.46
SF3B3-211ENST00000568291 PMCHL1Q16048 86 aa5.96□□□□□ -1.46
SF3B3-211ENST00000568291 Q6ZN92 141 aa5.96□□□□□ -1.46
SF3B3-211ENST00000568291 TOMM6Q96B49 74 aa5.96□□□□□ -1.46
SF3B3-211ENST00000568291 AMELXQ99217 191 aa5.96□□□□□ -1.46
SF3B3-211ENST00000568291 UBR4Q5T4S7 5183 aa5.95□□□□□ -1.46
SF3B3-211ENST00000568291 A0A087WZ39 114 aa5.95□□□□□ -1.46
SF3B3-211ENST00000568291 LOC107984640A0A0U1RRK4 108 aa5.95□□□□□ -1.46
SF3B3-211ENST00000568291 SNAPINO95295 136 aa5.95□□□□□ -1.46
SF3B3-211ENST00000568291 PTTG1IPP53801 180 aa5.95□□□□□ -1.46
SF3B3-211ENST00000568291 KIAA0087Q14695 138 aa5.95□□□□□ -1.46
SF3B3-211ENST00000568291 C9orf116Q5BN46 136 aaPredicted RBP5.95□□□□□ -1.46
SF3B3-211ENST00000568291 FA2HQ7L5A8 372 aa5.95□□□□□ -1.46
SF3B3-211ENST00000568291 SVBPQ8N300 66 aa5.95□□□□□ -1.46
SF3B3-211ENST00000568291 OR10D4PQ8NGN7 298 aa5.95□□□□□ -1.46
SF3B3-211ENST00000568291 URB1-AS1Q96HZ7 61 aa5.95□□□□□ -1.46
SF3B3-211ENST00000568291 C2orf48Q96LS8 159 aa5.95□□□□□ -1.46
SF3B3-211ENST00000568291 C2orf88Q9BSF0 95 aa5.95□□□□□ -1.46
SF3B3-211ENST00000568291 TOMM7Q9P0U1 55 aa5.95□□□□□ -1.46
SF3B3-211ENST00000568291 C6orf48Q9UBA6 75 aa5.95□□□□□ -1.46
SF3B3-211ENST00000568291 KRTAP9-6A0A140TA67 174 aa5.94□□□□□ -1.46
SF3B3-211ENST00000568291 FAM168BA1KXE4 195 aa5.94□□□□□ -1.46
SF3B3-211ENST00000568291 MT1HL1P0DM35 61 aa5.94□□□□□ -1.46
SF3B3-211ENST00000568291 NDUFA5Q16718 116 aa5.94□□□□□ -1.46
SF3B3-211ENST00000568291 GAGE2EQ4V326 116 aa5.94□□□□□ -1.46
SF3B3-211ENST00000568291 CBLN2Q8IUK8 224 aa5.94□□□□□ -1.46
SF3B3-211ENST00000568291 GAGE2DQ9UEU5 116 aa5.94□□□□□ -1.46
SF3B3-211ENST00000568291 CDKN2A-AS1Q9UH64 79 aa5.94□□□□□ -1.46
SF3B3-211ENST00000568291 K7EMI3 77 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms