RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 FAM104AQ969W3 186 aa4.26□□□□□ -1.73
CAPN3-218ENST00000568153 TM2D3Q9BRN9 247 aa4.26□□□□□ -1.73
CAPN3-218ENST00000568153 C2orf88Q9BSF0 95 aa4.26□□□□□ -1.73
CAPN3-218ENST00000568153 CHCHD5Q9BSY4 110 aa4.26□□□□□ -1.73
CAPN3-218ENST00000568153 KRTAP1-5Q9BYS1 174 aa4.26□□□□□ -1.73
CAPN3-218ENST00000568153 MRPS16Q9Y3D3 137 aaKnown RBP4.26□□□□□ -1.73
CAPN3-218ENST00000568153 TRRAPQ9Y4A5 3859 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 IGLV5-52A0A0A0MRZ9 124 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 A0A0J9YWU9 116 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 A0A0J9YXV3 536 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 TINCRA0A1B0GVN0 87 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 C11orf86A6NJI1 115 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 TMEM262E9PQX1 116 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 H3BNG1 76 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 SIVA1O15304 175 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 DLEU1O43261 78 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 ZNF25P17030 456 aaPredicted RBP4.25□□□□□ -1.73
CAPN3-218ENST00000568153 NMUP48645 174 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 HNRNPA3P51991 378 aaKnown RBP4.25□□□□□ -1.73
CAPN3-218ENST00000568153 CTAG1AP78358 180 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 GAGE6Q13070 117 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 TMEM170BQ5T4T1 132 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 CDC42SE2Q9NRR3 84 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 ICOSQ9Y6W8 199 aa4.25□□□□□ -1.73
CAPN3-218ENST00000568153 IGLV4-69A0A075B6H9 119 aa4.24□□□□□ -1.73
CAPN3-218ENST00000568153 A0A096LPF7 62 aa4.24□□□□□ -1.73
CAPN3-218ENST00000568153 E9PLD3 99 aa4.24□□□□□ -1.73
CAPN3-218ENST00000568153 M0R143 59 aa4.24□□□□□ -1.73
CAPN3-218ENST00000568153 TCTAP57738 103 aa4.24□□□□□ -1.73
CAPN3-218ENST00000568153 SEC11AP67812 179 aa4.24□□□□□ -1.73
CAPN3-218ENST00000568153 RNASE13Q5GAN3 156 aaKnown RBP4.24□□□□□ -1.73
CAPN3-218ENST00000568153 BOD1L2Q8IYS8 172 aa4.24□□□□□ -1.73
CAPN3-218ENST00000568153 GEMIN7Q9H840 131 aaKnown RBP4.24□□□□□ -1.73
CAPN3-218ENST00000568153 COL6A5A8TX70 2615 aa4.24□□□□□ -1.73
CAPN3-218ENST00000568153 DEFB131BA0A096LNP1 70 aa4.23□□□□□ -1.73
CAPN3-218ENST00000568153 IGKV2D-26A0A0A0MRZ7 120 aa4.23□□□□□ -1.73
CAPN3-218ENST00000568153 TRAV8-6A0A0B4J262 113 aa4.23□□□□□ -1.73
CAPN3-218ENST00000568153 A0A1B0GUV1 79 aa4.23□□□□□ -1.73
CAPN3-218ENST00000568153 TMEM223A0PJW6 202 aa4.23□□□□□ -1.73
CAPN3-218ENST00000568153 USP17L23D6RBM5 183 aa4.23□□□□□ -1.73
CAPN3-218ENST00000568153 H3BRM9 83 aa4.23□□□□□ -1.73
CAPN3-218ENST00000568153 UBE2D1P51668 147 aa4.23□□□□□ -1.73
CAPN3-218ENST00000568153 LYPD5Q6UWN5 251 aa4.23□□□□□ -1.73
CAPN3-218ENST00000568153 Q6ZTC4 211 aa4.23□□□□□ -1.73
CAPN3-218ENST00000568153 Q6ZUT4 128 aa4.23□□□□□ -1.73
CAPN3-218ENST00000568153 FAM19A3Q7Z5A8 133 aa4.23□□□□□ -1.73
CAPN3-218ENST00000568153 PCP2Q8IVA1 136 aa4.23□□□□□ -1.73
CAPN3-218ENST00000568153 MAPKAPK5-AS1Q8N8E1 139 aa4.23□□□□□ -1.73
CAPN3-218ENST00000568153 CHAC1Q9BUX1 264 aa4.23□□□□□ -1.73
CAPN3-218ENST00000568153 TRAV13-1A0A0B4J241 112 aa4.22□□□□□ -1.73
CAPN3-218ENST00000568153 MYMXA0A1B0GTQ4 84 aa4.22□□□□□ -1.73
CAPN3-218ENST00000568153 LEPROTO15243 131 aa4.22□□□□□ -1.73
CAPN3-218ENST00000568153 CCL25O15444 150 aa4.22□□□□□ -1.73
CAPN3-218ENST00000568153 ZNF22P17026 224 aaPredicted RBP4.22□□□□□ -1.73
CAPN3-218ENST00000568153 RBX1P62877 108 aa4.22□□□□□ -1.73
CAPN3-218ENST00000568153 HERVK_113P63121 156 aa4.22□□□□□ -1.73
CAPN3-218ENST00000568153 LELP1Q5T871 98 aa4.22□□□□□ -1.73
CAPN3-218ENST00000568153 PLEKHB2Q96CS7 222 aa4.22□□□□□ -1.73
CAPN3-218ENST00000568153 IGLV4-60A0A075B6I1 120 aa4.21□□□□□ -1.74
CAPN3-218ENST00000568153 TRAV10A0A0B4J240 114 aa4.21□□□□□ -1.74
CAPN3-218ENST00000568153 LGALS3P17931 250 aaKnown RBP4.21□□□□□ -1.74
CAPN3-218ENST00000568153 COX6A2Q02221 97 aa4.21□□□□□ -1.74
CAPN3-218ENST00000568153 SS18Q15532 418 aa4.21□□□□□ -1.74
CAPN3-218ENST00000568153 LBHQ53QV2 105 aaPredicted RBP4.21□□□□□ -1.74
CAPN3-218ENST00000568153 LINC00242Q5T6M2 205 aa4.21□□□□□ -1.74
CAPN3-218ENST00000568153 LINC00469Q8N7U9 141 aa4.21□□□□□ -1.74
CAPN3-218ENST00000568153 B9D2Q9BPU9 175 aa4.21□□□□□ -1.74
CAPN3-218ENST00000568153 HIGD1BQ9P298 99 aa4.21□□□□□ -1.74
CAPN3-218ENST00000568153 NBEAL2Q6ZNJ1 2754 aa4.2□□□□□ -1.74
CAPN3-218ENST00000568153 NOTCH1P46531 2555 aa4.2□□□□□ -1.74
CAPN3-218ENST00000568153 IGHV1-58A0A0C4DH39 117 aa4.2□□□□□ -1.74
CAPN3-218ENST00000568153 IGKV3OR2-268A0A0C4DH90 116 aa4.2□□□□□ -1.74
CAPN3-218ENST00000568153 LINC00959A0A1B0GUT2 108 aa4.2□□□□□ -1.74
CAPN3-218ENST00000568153 ZNF815PA8K554 130 aa4.2□□□□□ -1.74
CAPN3-218ENST00000568153 J3QQQ9 107 aa4.2□□□□□ -1.74
CAPN3-218ENST00000568153 HINT1P49773 126 aaPredicted RBP4.2□□□□□ -1.74
CAPN3-218ENST00000568153 BATFQ16520 125 aa4.2□□□□□ -1.74
CAPN3-218ENST00000568153 SNHG12Q9BXW3 62 aa4.2□□□□□ -1.74
CAPN3-218ENST00000568153 TTTY13Q9BZ97 58 aa4.2□□□□□ -1.74
CAPN3-218ENST00000568153 CDKN2A-AS1Q9UH64 79 aa4.2□□□□□ -1.74
CAPN3-218ENST00000568153 IGLV5-37A0A075B6J1 123 aa4.19□□□□□ -1.74
CAPN3-218ENST00000568153 IGLV5-45A0A087WSX0 123 aa4.19□□□□□ -1.74
CAPN3-218ENST00000568153 ANGP03950 147 aaKnown RBP4.19□□□□□ -1.74
CAPN3-218ENST00000568153 IGHV3-30-3P0DP02 117 aa4.19□□□□□ -1.74
CAPN3-218ENST00000568153 ESRGQ1W209 222 aa4.19□□□□□ -1.74
CAPN3-218ENST00000568153 MPV17L2Q567V2 206 aa4.19□□□□□ -1.74
CAPN3-218ENST00000568153 COL5A1-AS1Q5SY13 56 aa4.19□□□□□ -1.74
CAPN3-218ENST00000568153 SCGB1D4Q6XE38 83 aa4.19□□□□□ -1.74
CAPN3-218ENST00000568153 C2orf91Q6ZV80 131 aa4.19□□□□□ -1.74
CAPN3-218ENST00000568153 LINC00269Q8N2A0 174 aa4.19□□□□□ -1.74
CAPN3-218ENST00000568153 C15orf53Q8NAA6 179 aa4.19□□□□□ -1.74
CAPN3-218ENST00000568153 NACAE9PAV3 2078 aa4.18□□□□□ -1.74
CAPN3-218ENST00000568153 IGHV3-64A0A075B6Q5 118 aa4.18□□□□□ -1.74
CAPN3-218ENST00000568153 SPINK8P0C7L1 97 aa4.18□□□□□ -1.74
CAPN3-218ENST00000568153 HSD52Q0P140 79 aa4.18□□□□□ -1.74
CAPN3-218ENST00000568153 SRSF9Q13242 221 aaKnown RBP eCLIP4.18□□□□□ -1.74
CAPN3-218ENST00000568153 TAL2Q16559 108 aa4.18□□□□□ -1.74
CAPN3-218ENST00000568153 BVES-AS1Q5T3Y7 98 aa4.18□□□□□ -1.74
CAPN3-218ENST00000568153 HIST1H4GQ99525 98 aa4.18□□□□□ -1.74
CAPN3-218ENST00000568153 TP73-AS1Q9UF72 201 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms