RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 CHCHD10Q8WYQ3 142 aaPredicted RBP6.38□□□□□ -1.39
CLK3-220ENST00000567992 TIMM21Q9BVV7 248 aa6.38□□□□□ -1.39
CLK3-220ENST00000567992 PRO1933Q9H354 126 aa6.38□□□□□ -1.39
CLK3-220ENST00000567992 MAP1LC3AQ9H492 121 aa6.38□□□□□ -1.39
CLK3-220ENST00000567992 LOC389332A0A1B0GUA5 103 aa6.37□□□□□ -1.39
CLK3-220ENST00000567992 KIAA1644Q3SXP7 199 aa6.37□□□□□ -1.39
CLK3-220ENST00000567992 LINC01620Q4KN68 170 aa6.37□□□□□ -1.39
CLK3-220ENST00000567992 C14orf177Q52M58 125 aa6.37□□□□□ -1.39
CLK3-220ENST00000567992 RNASE13Q5GAN3 156 aaKnown RBP6.37□□□□□ -1.39
CLK3-220ENST00000567992 TEX43Q6ZNM6 134 aa6.37□□□□□ -1.39
CLK3-220ENST00000567992 Q6ZSA8 131 aa6.37□□□□□ -1.39
CLK3-220ENST00000567992 LINC00469Q8N7U9 141 aa6.37□□□□□ -1.39
CLK3-220ENST00000567992 Q8N8P6 123 aa6.37□□□□□ -1.39
CLK3-220ENST00000567992 C18orf32Q8TCD1 76 aa6.37□□□□□ -1.39
CLK3-220ENST00000567992 FAM30AQ9NZY2 134 aa6.37□□□□□ -1.39
CLK3-220ENST00000567992 CCL25O15444 150 aa6.36□□□□□ -1.39
CLK3-220ENST00000567992 ALKBH7Q9BT30 221 aaPredicted RBP6.36□□□□□ -1.39
CLK3-220ENST00000567992 KRTAP4-5Q9BYR2 181 aa6.36□□□□□ -1.39
CLK3-220ENST00000567992 SLPIP03973 132 aa6.35□□□□□ -1.39
CLK3-220ENST00000567992 IFI27P40305 119 aaPredicted RBP6.35□□□□□ -1.39
CLK3-220ENST00000567992 XCL1P47992 114 aa6.35□□□□□ -1.39
CLK3-220ENST00000567992 HAMPP81172 84 aa6.35□□□□□ -1.39
CLK3-220ENST00000567992 SMAGPQ0VAQ4 97 aa6.35□□□□□ -1.39
CLK3-220ENST00000567992 DGAT2L7PQ6IED9 249 aa6.35□□□□□ -1.39
CLK3-220ENST00000567992 OPRPNQ99935 248 aaPredicted RBP6.35□□□□□ -1.39
CLK3-220ENST00000567992 SPANXA1Q9NS26 97 aa6.35□□□□□ -1.39
CLK3-220ENST00000567992 CNBPP62633 177 aaKnown RBP6.34□□□□□ -1.39
CLK3-220ENST00000567992 MRPS36P82909 103 aaKnown RBP6.34□□□□□ -1.39
CLK3-220ENST00000567992 CD164L2Q6UWJ8 174 aa6.34□□□□□ -1.39
CLK3-220ENST00000567992 C2orf88Q9BSF0 95 aa6.34□□□□□ -1.39
CLK3-220ENST00000567992 PYGO1Q9Y3Y4 419 aa6.34□□□□□ -1.39
CLK3-220ENST00000567992 IGLV4-3A0A075B6K6 122 aa6.33□□□□□ -1.4
CLK3-220ENST00000567992 GVQW2A0A096LPI5 108 aaPredicted RBP6.33□□□□□ -1.4
CLK3-220ENST00000567992 hDV102S1A0JD36 115 aa6.33□□□□□ -1.4
CLK3-220ENST00000567992 LINC01546A6NGU7 62 aa6.33□□□□□ -1.4
CLK3-220ENST00000567992 K7EMI3 77 aa6.33□□□□□ -1.4
CLK3-220ENST00000567992 SS18Q15532 418 aa6.33□□□□□ -1.4
CLK3-220ENST00000567992 Q8N1X5 172 aa6.33□□□□□ -1.4
CLK3-220ENST00000567992 CHCHD1Q96BP2 118 aaKnown RBP6.33□□□□□ -1.4
CLK3-220ENST00000567992 NXT2Q9NPJ8 142 aaKnown RBP6.33□□□□□ -1.4
CLK3-220ENST00000567992 SRRM2Q9UQ35 2752 aaKnown RBP6.33□□□□□ -1.4
CLK3-220ENST00000567992 TRAV13-1A0A0B4J241 112 aa6.32□□□□□ -1.4
CLK3-220ENST00000567992 HSBP1O75506 76 aa6.32□□□□□ -1.4
CLK3-220ENST00000567992 KRTDAPP60985 99 aa6.32□□□□□ -1.4
CLK3-220ENST00000567992 HIGD2BQ4VC39 106 aa6.32□□□□□ -1.4
CLK3-220ENST00000567992 ORMDL2Q53FV1 153 aa6.32□□□□□ -1.4
CLK3-220ENST00000567992 C2orf66Q6UXQ4 117 aa6.32□□□□□ -1.4
CLK3-220ENST00000567992 LINC00173Q6ZV60 143 aa6.32□□□□□ -1.4
CLK3-220ENST00000567992 C9orf163Q8N9P6 203 aa6.32□□□□□ -1.4
CLK3-220ENST00000567992 MIEN1Q9BRT3 115 aa6.32□□□□□ -1.4
CLK3-220ENST00000567992 VAMP8Q9BV40 100 aa6.32□□□□□ -1.4
CLK3-220ENST00000567992 IGIPA6NJ69 53 aa6.31□□□□□ -1.4
CLK3-220ENST00000567992 C3orf79P0CE67 100 aa6.31□□□□□ -1.4
CLK3-220ENST00000567992 PMCHL1Q16048 86 aa6.31□□□□□ -1.4
CLK3-220ENST00000567992 CFAP161Q6P656 301 aa6.31□□□□□ -1.4
CLK3-220ENST00000567992 URB1-AS1Q96HZ7 61 aa6.31□□□□□ -1.4
CLK3-220ENST00000567992 CYSLTR1Q9Y271 337 aa6.31□□□□□ -1.4
CLK3-220ENST00000567992 IGHV1-58A0A0C4DH39 117 aa6.3□□□□□ -1.4
CLK3-220ENST00000567992 C20orf202A1L168 122 aa6.3□□□□□ -1.4
CLK3-220ENST00000567992 PANO1I0J062 215 aa6.3□□□□□ -1.4
CLK3-220ENST00000567992 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
CLK3-220ENST00000567992 ZC2HC1BQ5TFG8 222 aa6.3□□□□□ -1.4
CLK3-220ENST00000567992 SCXQ7RTU7 201 aa6.3□□□□□ -1.4
CLK3-220ENST00000567992 FAM19A2Q8N3H0 131 aa6.3□□□□□ -1.4
CLK3-220ENST00000567992 TMEM141Q96I45 108 aa6.3□□□□□ -1.4
CLK3-220ENST00000567992 AMELXQ99217 191 aa6.3□□□□□ -1.4
CLK3-220ENST00000567992 IGHV3OR16-9A0A0B4J2B5 98 aa6.29□□□□□ -1.4
CLK3-220ENST00000567992 M0R143 59 aa6.29□□□□□ -1.4
CLK3-220ENST00000567992 COX7A2LO14548 114 aa6.29□□□□□ -1.4
CLK3-220ENST00000567992 LINC00614P0C842 121 aa6.29□□□□□ -1.4
CLK3-220ENST00000567992 SDIM1Q6ZPB5 146 aa6.29□□□□□ -1.4
CLK3-220ENST00000567992 TOMM6Q96B49 74 aa6.29□□□□□ -1.4
CLK3-220ENST00000567992 LINC00526Q96FQ7 95 aa6.29□□□□□ -1.4
CLK3-220ENST00000567992 AP5S1Q9NUS5 200 aa6.29□□□□□ -1.4
CLK3-220ENST00000567992 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.29□□□□□ -1.4
CLK3-220ENST00000567992 PKHD1L1Q86WI1 4243 aa6.29□□□□□ -1.4
CLK3-220ENST00000567992 MYCBP2O75592 4640 aa6.29□□□□□ -1.4
CLK3-220ENST00000567992 SMR3BP02814 79 aaPredicted RBP6.28□□□□□ -1.4
CLK3-220ENST00000567992 NPSP0C0P6 89 aa6.28□□□□□ -1.4
CLK3-220ENST00000567992 UBE2D1P51668 147 aa6.28□□□□□ -1.4
CLK3-220ENST00000567992 LINC00242Q5T6M2 205 aa6.28□□□□□ -1.4
CLK3-220ENST00000567992 C5orf38Q86SI9 138 aa6.28□□□□□ -1.4
CLK3-220ENST00000567992 PRSS3P2Q8NHM4 247 aa6.28□□□□□ -1.4
CLK3-220ENST00000567992 TIMM17AQ99595 171 aa6.28□□□□□ -1.4
CLK3-220ENST00000567992 CHAC1Q9BUX1 264 aa6.28□□□□□ -1.4
CLK3-220ENST00000567992 SNHG12Q9BXW3 62 aa6.28□□□□□ -1.4
CLK3-220ENST00000567992 PAM16Q9Y3D7 125 aa6.28□□□□□ -1.4
CLK3-220ENST00000567992 IGHV3-64A0A075B6Q5 118 aa6.27□□□□□ -1.41
CLK3-220ENST00000567992 A0A096LNJ9 63 aa6.27□□□□□ -1.41
CLK3-220ENST00000567992 A0A1B0GV90 55 aa6.27□□□□□ -1.41
CLK3-220ENST00000567992 COX6A2Q02221 97 aa6.27□□□□□ -1.41
CLK3-220ENST00000567992 CIRBPQ14011 172 aaKnown RBP6.27□□□□□ -1.41
CLK3-220ENST00000567992 SPATA45Q537H7 98 aa6.27□□□□□ -1.41
CLK3-220ENST00000567992 Q5VSD8 79 aa6.27□□□□□ -1.41
CLK3-220ENST00000567992 FAM19A3Q7Z5A8 133 aa6.27□□□□□ -1.41
CLK3-220ENST00000567992 CIRBP-AS1Q8TBR5 109 aa6.27□□□□□ -1.41
CLK3-220ENST00000567992 UQCR10Q9UDW1 63 aa6.27□□□□□ -1.41
CLK3-220ENST00000567992 IGLV4-69A0A075B6H9 119 aa6.26□□□□□ -1.41
CLK3-220ENST00000567992 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.26□□□□□ -1.41
CLK3-220ENST00000567992 MALP21145 153 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms