RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.24□□□□□ -1.09
GINS3-209ENST00000567909 SLPIP03973 132 aa8.24□□□□□ -1.09
GINS3-209ENST00000567909 LINC00614P0C842 121 aa8.24□□□□□ -1.09
GINS3-209ENST00000567909 XGP55808 180 aa8.24□□□□□ -1.09
GINS3-209ENST00000567909 CNBPP62633 177 aaKnown RBP8.24□□□□□ -1.09
GINS3-209ENST00000567909 LINC00173Q6ZV60 143 aa8.24□□□□□ -1.09
GINS3-209ENST00000567909 C9orf163Q8N9P6 203 aa8.24□□□□□ -1.09
GINS3-209ENST00000567909 TIMM17AQ99595 171 aa8.24□□□□□ -1.09
GINS3-209ENST00000567909 ZNF561-AS1K7EIQ3 104 aa8.23□□□□□ -1.09
GINS3-209ENST00000567909 NPSP0C0P6 89 aa8.23□□□□□ -1.09
GINS3-209ENST00000567909 PAPPA-AS1Q5QFB9 102 aa8.23□□□□□ -1.09
GINS3-209ENST00000567909 ERASQ7Z444 233 aa8.23□□□□□ -1.09
GINS3-209ENST00000567909 BAGE3Q86Y29 109 aa8.23□□□□□ -1.09
GINS3-209ENST00000567909 URB1-AS1Q96HZ7 61 aa8.23□□□□□ -1.09
GINS3-209ENST00000567909 AMELXQ99217 191 aa8.23□□□□□ -1.09
GINS3-209ENST00000567909 IGHV3OR16-9A0A0B4J2B5 98 aa8.22□□□□□ -1.09
GINS3-209ENST00000567909 HIST1H2BKO60814 126 aa8.22□□□□□ -1.09
GINS3-209ENST00000567909 HIST1H2BJP06899 126 aa8.22□□□□□ -1.09
GINS3-209ENST00000567909 HIST1H2BOP23527 126 aa8.22□□□□□ -1.09
GINS3-209ENST00000567909 HIST1H2BBP33778 126 aa8.22□□□□□ -1.09
GINS3-209ENST00000567909 UBE2D1P51668 147 aa8.22□□□□□ -1.09
GINS3-209ENST00000567909 HIST1H2BDP58876 126 aa8.22□□□□□ -1.09
GINS3-209ENST00000567909 HIST1H2BCP62807 126 aa8.22□□□□□ -1.09
GINS3-209ENST00000567909 PMCHL1Q16048 86 aa8.22□□□□□ -1.09
GINS3-209ENST00000567909 HIST2H2BEQ16778 126 aa8.22□□□□□ -1.09
GINS3-209ENST00000567909 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.22□□□□□ -1.09
GINS3-209ENST00000567909 LINC00242Q5T6M2 205 aa8.22□□□□□ -1.09
GINS3-209ENST00000567909 HIST1H2BHQ93079 126 aa8.22□□□□□ -1.09
GINS3-209ENST00000567909 HIST1H2BNQ99877 126 aa8.22□□□□□ -1.09
GINS3-209ENST00000567909 HIST1H2BMQ99879 126 aa8.22□□□□□ -1.09
GINS3-209ENST00000567909 LINC01549A6NIU2 74 aa8.21□□□□□ -1.1
GINS3-209ENST00000567909 APOMO95445 188 aa8.21□□□□□ -1.1
GINS3-209ENST00000567909 COX6A2Q02221 97 aa8.21□□□□□ -1.1
GINS3-209ENST00000567909 COA6Q5JTJ3 125 aaKnown RBP8.21□□□□□ -1.1
GINS3-209ENST00000567909 Q6ZSA8 131 aa8.21□□□□□ -1.1
GINS3-209ENST00000567909 TMA7Q9Y2S6 64 aaKnown RBP8.21□□□□□ -1.1
GINS3-209ENST00000567909 IGLV4-69A0A075B6H9 119 aa8.2□□□□□ -1.1
GINS3-209ENST00000567909 IGHV3-64A0A075B6Q5 118 aa8.2□□□□□ -1.1
GINS3-209ENST00000567909 ORAOV1Q8WV07 137 aa8.2□□□□□ -1.1
GINS3-209ENST00000567909 A0A096LNJ9 63 aa8.19□□□□□ -1.1
GINS3-209ENST00000567909 HBDP02042 147 aa8.19□□□□□ -1.1
GINS3-209ENST00000567909 SMR3BP02814 79 aaPredicted RBP8.19□□□□□ -1.1
GINS3-209ENST00000567909 S100A2P29034 98 aa8.19□□□□□ -1.1
GINS3-209ENST00000567909 NDUFA6P56556 154 aa8.19□□□□□ -1.1
GINS3-209ENST00000567909 SPAG11BQ08648 103 aa8.19□□□□□ -1.1
GINS3-209ENST00000567909 SDIM1Q6ZPB5 146 aa8.19□□□□□ -1.1
GINS3-209ENST00000567909 CHCHD1Q96BP2 118 aaKnown RBP8.19□□□□□ -1.1
GINS3-209ENST00000567909 CARD19Q96LW7 228 aa8.19□□□□□ -1.1
GINS3-209ENST00000567909 A0A087WZ39 114 aa8.18□□□□□ -1.1
GINS3-209ENST00000567909 A0A0J9YXV3 536 aa8.18□□□□□ -1.1
GINS3-209ENST00000567909 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.18□□□□□ -1.1
GINS3-209ENST00000567909 SYCNQ0VAF6 134 aa8.18□□□□□ -1.1
GINS3-209ENST00000567909 SCXQ7RTU7 201 aa8.18□□□□□ -1.1
GINS3-209ENST00000567909 CAMK2N2Q96S95 79 aa8.18□□□□□ -1.1
GINS3-209ENST00000567909 KRTAP17-1Q9BYP8 105 aa8.18□□□□□ -1.1
GINS3-209ENST00000567909 GEMIN7Q9H840 131 aaKnown RBP8.18□□□□□ -1.1
GINS3-209ENST00000567909 SEC11AP67812 179 aa8.17□□□□□ -1.1
GINS3-209ENST00000567909 PMVKQ15126 192 aa8.17□□□□□ -1.1
GINS3-209ENST00000567909 Q8N1X5 172 aa8.17□□□□□ -1.1
GINS3-209ENST00000567909 OR10D4PQ8NGN7 298 aa8.17□□□□□ -1.1
GINS3-209ENST00000567909 CHAC1Q9BUX1 264 aa8.17□□□□□ -1.1
GINS3-209ENST00000567909 CST9LQ9H4G1 147 aa8.17□□□□□ -1.1
GINS3-209ENST00000567909 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.17□□□□□ -1.1
GINS3-209ENST00000567909 HSBP1O75506 76 aa8.16□□□□□ -1.1
GINS3-209ENST00000567909 CHTF8P0CG12 524 aa8.16□□□□□ -1.1
GINS3-209ENST00000567909 HERVK_113P63121 156 aa8.16□□□□□ -1.1
GINS3-209ENST00000567909 Q6ZRU5 148 aa8.16□□□□□ -1.1
GINS3-209ENST00000567909 FAM19A3Q7Z5A8 133 aa8.16□□□□□ -1.1
GINS3-209ENST00000567909 DPH3Q96FX2 82 aa8.16□□□□□ -1.1
GINS3-209ENST00000567909 PACRGQ96M98 296 aaPredicted RBP8.16□□□□□ -1.1
GINS3-209ENST00000567909 C5orf52A6NGY3 159 aa8.15□□□□□ -1.1
GINS3-209ENST00000567909 PANO1I0J062 215 aa8.15□□□□□ -1.1
GINS3-209ENST00000567909 ATP5LO75964 103 aa8.15□□□□□ -1.1
GINS3-209ENST00000567909 PDZD11Q5EBL8 140 aa8.15□□□□□ -1.1
GINS3-209ENST00000567909 LINC00469Q8N7U9 141 aa8.15□□□□□ -1.1
GINS3-209ENST00000567909 CIRBP-AS1Q8TBR5 109 aa8.15□□□□□ -1.1
GINS3-209ENST00000567909 C2orf48Q96LS8 159 aa8.15□□□□□ -1.1
GINS3-209ENST00000567909 KRTAP4-5Q9BYR2 181 aa8.15□□□□□ -1.1
GINS3-209ENST00000567909 CDKN2A-AS1Q9UH64 79 aa8.15□□□□□ -1.1
GINS3-209ENST00000567909 FAT1Q14517 4588 aa8.14□□□□□ -1.11
GINS3-209ENST00000567909 IGKV2-24A0A0C4DH68 120 aa8.14□□□□□ -1.11
GINS3-209ENST00000567909 TINCRA0A1B0GVN0 87 aa8.14□□□□□ -1.11
GINS3-209ENST00000567909 SNRPEP62304 92 aaKnown RBP8.14□□□□□ -1.11
GINS3-209ENST00000567909 FAM19A2Q8N3H0 131 aa8.14□□□□□ -1.11
GINS3-209ENST00000567909 TOMM7Q9P0U1 55 aa8.14□□□□□ -1.11
GINS3-209ENST00000567909 EPM2AB3EWF7 344 aa8.13□□□□□ -1.11
GINS3-209ENST00000567909 NDUFA1O15239 70 aa8.13□□□□□ -1.11
GINS3-209ENST00000567909 SERF1AO75920 110 aa8.13□□□□□ -1.11
GINS3-209ENST00000567909 LINC01561Q8N1V8 128 aa8.13□□□□□ -1.11
GINS3-209ENST00000567909 PRSS2P07478 247 aa8.12□□□□□ -1.11
GINS3-209ENST00000567909 MAJINQ3KP22 176 aa8.12□□□□□ -1.11
GINS3-209ENST00000567909 Q5VSD8 79 aa8.12□□□□□ -1.11
GINS3-209ENST00000567909 UNQ6190/PRO20217Q6UXQ8 127 aa8.12□□□□□ -1.11
GINS3-209ENST00000567909 PKIGQ9Y2B9 76 aa8.12□□□□□ -1.11
GINS3-209ENST00000567909 A0A096LNI7 61 aa8.11□□□□□ -1.11
GINS3-209ENST00000567909 F8WDY8 70 aa8.11□□□□□ -1.11
GINS3-209ENST00000567909 FAM229AH3BQW9 127 aa8.11□□□□□ -1.11
GINS3-209ENST00000567909 AKR1D1P51857 326 aa8.11□□□□□ -1.11
GINS3-209ENST00000567909 LINC00310P59036 64 aa8.11□□□□□ -1.11
GINS3-209ENST00000567909 KIAA0087Q14695 138 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms