RNA–Protein interactions for RNA: ENST00000567890.1

NR4A1-222, Transcript of nuclear receptor subfamily 4 group A member 1, human

TSL 5

Gene NR4A1, Length 612 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR4A1-222	ENST00000567890		D6R8Y8	96 aa		7.65	□□□□□ -1.18
NR4A1-222	ENST00000567890	RAB14	P61106	215 aa		7.65	□□□□□ -1.18
NR4A1-222	ENST00000567890	RNF151	Q2KHN1	245 aa		7.65	□□□□□ -1.18
NR4A1-222	ENST00000567890	MRPL54	Q6P161	138 aa	Known RBP	7.65	□□□□□ -1.18
NR4A1-222	ENST00000567890	CAMK2N2	Q96S95	79 aa		7.65	□□□□□ -1.18
NR4A1-222	ENST00000567890	PLA2G2D	Q9UNK4	145 aa		7.65	□□□□□ -1.18
NR4A1-222	ENST00000567890	PTTG1IP	P53801	180 aa		7.64	□□□□□ -1.19
NR4A1-222	ENST00000567890	PRR3	P79522	188 aa	Known RBP	7.64	□□□□□ -1.19
NR4A1-222	ENST00000567890		Q6ZUT4	128 aa		7.64	□□□□□ -1.19
NR4A1-222	ENST00000567890	MT-ND4L	P03901	98 aa		7.63	□□□□□ -1.19
NR4A1-222	ENST00000567890	IFI27	P40305	119 aa	Predicted RBP	7.63	□□□□□ -1.19
NR4A1-222	ENST00000567890		Q6ZRP5	223 aa		7.63	□□□□□ -1.19
NR4A1-222	ENST00000567890	TMEM136	Q6ZRR5	245 aa		7.63	□□□□□ -1.19
NR4A1-222	ENST00000567890	ANAPC16	Q96DE5	110 aa		7.63	□□□□□ -1.19
NR4A1-222	ENST00000567890	PYGO1	Q9Y3Y4	419 aa		7.63	□□□□□ -1.19
NR4A1-222	ENST00000567890	PRSS47	A8MTI9	375 aa		7.62	□□□□□ -1.19
NR4A1-222	ENST00000567890		K7EMI3	77 aa		7.62	□□□□□ -1.19
NR4A1-222	ENST00000567890	RPL39	P62891	51 aa	Known RBP	7.62	□□□□□ -1.19
NR4A1-222	ENST00000567890	GAGE2B	Q13066	116 aa		7.62	□□□□□ -1.19
NR4A1-222	ENST00000567890	SPINK6	Q6UWN8	80 aa		7.62	□□□□□ -1.19
NR4A1-222	ENST00000567890	C5orf38	Q86SI9	138 aa		7.62	□□□□□ -1.19
NR4A1-222	ENST00000567890	IMMP2L	Q96T52	175 aa		7.62	□□□□□ -1.19
NR4A1-222	ENST00000567890	IGHV3OR16-9	A0A0B4J2B5	98 aa		7.61	□□□□□ -1.19
NR4A1-222	ENST00000567890	NPY	P01303	97 aa		7.61	□□□□□ -1.19
NR4A1-222	ENST00000567890	NPS	P0C0P6	89 aa		7.61	□□□□□ -1.19
NR4A1-222	ENST00000567890	SPAG11B	Q08648	103 aa		7.61	□□□□□ -1.19
NR4A1-222	ENST00000567890	REG3G	Q6UW15	175 aa		7.61	□□□□□ -1.19
NR4A1-222	ENST00000567890	PRELID3A	Q96N28	172 aa		7.61	□□□□□ -1.19
NR4A1-222	ENST00000567890	MRPL35	Q9NZE8	188 aa	Known RBP	7.61	□□□□□ -1.19
NR4A1-222	ENST00000567890	TGIF2-C20orf24	A0A0A6YYL0	155 aa		7.6	□□□□□ -1.19
NR4A1-222	ENST00000567890	IFITM10	A6NMD0	228 aa		7.6	□□□□□ -1.19
NR4A1-222	ENST00000567890	MT1HL1	P0DM35	61 aa		7.6	□□□□□ -1.19
NR4A1-222	ENST00000567890	G0S2	P27469	103 aa		7.6	□□□□□ -1.19
NR4A1-222	ENST00000567890	NDUFA1	O15239	70 aa		7.59	□□□□□ -1.19
NR4A1-222	ENST00000567890	RPL18A	Q02543	176 aa	Known RBP	7.59	□□□□□ -1.19
NR4A1-222	ENST00000567890	LINC01600	Q96MT4	127 aa		7.59	□□□□□ -1.19
NR4A1-222	ENST00000567890	MAP1LC3A	Q9H492	121 aa		7.59	□□□□□ -1.19
NR4A1-222	ENST00000567890	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	7.58	□□□□□ -1.2
NR4A1-222	ENST00000567890	ORMDL2	Q53FV1	153 aa		7.58	□□□□□ -1.2
NR4A1-222	ENST00000567890	PAPPA-AS1	Q5QFB9	102 aa		7.58	□□□□□ -1.2
NR4A1-222	ENST00000567890		Q6ZN92	141 aa		7.58	□□□□□ -1.2
NR4A1-222	ENST00000567890	LINC01561	Q8N1V8	128 aa		7.58	□□□□□ -1.2
NR4A1-222	ENST00000567890	ORAOV1	Q8WV07	137 aa		7.58	□□□□□ -1.2
NR4A1-222	ENST00000567890	TMEM141	Q96I45	108 aa		7.58	□□□□□ -1.2
NR4A1-222	ENST00000567890	OPRPN	Q99935	248 aa	Predicted RBP	7.58	□□□□□ -1.2
NR4A1-222	ENST00000567890		A0A087WZ39	114 aa		7.57	□□□□□ -1.2
NR4A1-222	ENST00000567890	TLX1NB	P0CAT3	122 aa		7.57	□□□□□ -1.2
NR4A1-222	ENST00000567890	TEX43	Q6ZNM6	134 aa		7.57	□□□□□ -1.2
NR4A1-222	ENST00000567890	FAM104A	Q969W3	186 aa		7.57	□□□□□ -1.2
NR4A1-222	ENST00000567890	C2orf88	Q9BSF0	95 aa		7.57	□□□□□ -1.2
NR4A1-222	ENST00000567890	CYSLTR1	Q9Y271	337 aa		7.57	□□□□□ -1.2
NR4A1-222	ENST00000567890	C9orf116	Q5BN46	136 aa	Predicted RBP	7.56	□□□□□ -1.2
NR4A1-222	ENST00000567890		Q8N8P6	123 aa		7.56	□□□□□ -1.2
NR4A1-222	ENST00000567890	NXT2	Q9NPJ8	142 aa	Known RBP	7.56	□□□□□ -1.2
NR4A1-222	ENST00000567890	IGLV4-3	A0A075B6K6	122 aa		7.55	□□□□□ -1.2
NR4A1-222	ENST00000567890		A0A0J9YXV3	536 aa		7.55	□□□□□ -1.2
NR4A1-222	ENST00000567890	TRBV30	A0A0K0K1B3	111 aa		7.55	□□□□□ -1.2
NR4A1-222	ENST00000567890	SEC11A	P67812	179 aa		7.55	□□□□□ -1.2
NR4A1-222	ENST00000567890	SRSF9	Q13242	221 aa	Known RBP eCLIP	7.55	□□□□□ -1.2
NR4A1-222	ENST00000567890	TRAV9-1	A0A075B6T8	112 aa		7.54	□□□□□ -1.2
NR4A1-222	ENST00000567890	LOC389332	A0A1B0GUA5	103 aa		7.54	□□□□□ -1.2
NR4A1-222	ENST00000567890		A0A1W2PNN7	141 aa		7.54	□□□□□ -1.2
NR4A1-222	ENST00000567890	LINC01549	A6NIU2	74 aa		7.54	□□□□□ -1.2
NR4A1-222	ENST00000567890	CLLU1	Q5K131	121 aa		7.54	□□□□□ -1.2
NR4A1-222	ENST00000567890	LINC00242	Q5T6M2	205 aa		7.54	□□□□□ -1.2
NR4A1-222	ENST00000567890	UQCC3	Q6UW78	93 aa		7.54	□□□□□ -1.2
NR4A1-222	ENST00000567890	C2orf66	Q6UXQ4	117 aa		7.54	□□□□□ -1.2
NR4A1-222	ENST00000567890	CTDSP1	Q9GZU7	261 aa		7.54	□□□□□ -1.2
NR4A1-222	ENST00000567890	VCX2	Q9H322	139 aa		7.54	□□□□□ -1.2
NR4A1-222	ENST00000567890	UBR4	Q5T4S7	5183 aa		7.54	□□□□□ -1.2
NR4A1-222	ENST00000567890	MT-ND6	P03923	174 aa		7.53	□□□□□ -1.2
NR4A1-222	ENST00000567890	MRPL18	Q9H0U6	180 aa	Known RBP	7.53	□□□□□ -1.2
NR4A1-222	ENST00000567890	TNXB	P22105	4242 aa		7.53	□□□□□ -1.2
NR4A1-222	ENST00000567890	UBE2D1	P51668	147 aa		7.52	□□□□□ -1.21
NR4A1-222	ENST00000567890	PACRG	Q96M98	296 aa	Predicted RBP	7.52	□□□□□ -1.21
NR4A1-222	ENST00000567890	LOC100996750	A0A140TA64	210 aa		7.51	□□□□□ -1.21
NR4A1-222	ENST00000567890	NDUFC2-KCTD14	E9PQ53	114 aa		7.51	□□□□□ -1.21
NR4A1-222	ENST00000567890	KIAA0087	Q14695	138 aa		7.51	□□□□□ -1.21
NR4A1-222	ENST00000567890	ODF1	Q14990	250 aa		7.51	□□□□□ -1.21
NR4A1-222	ENST00000567890	C10orf25	Q5T742	122 aa		7.51	□□□□□ -1.21
NR4A1-222	ENST00000567890	UNQ6190/PRO20217	Q6UXQ8	127 aa		7.51	□□□□□ -1.21
NR4A1-222	ENST00000567890	PHF5A	Q7RTV0	110 aa	Known RBP	7.51	□□□□□ -1.21
NR4A1-222	ENST00000567890	FAM19A3	Q7Z5A8	133 aa		7.51	□□□□□ -1.21
NR4A1-222	ENST00000567890	AMELX	Q99217	191 aa		7.51	□□□□□ -1.21
NR4A1-222	ENST00000567890	KRTAP4-6	Q9BYQ5	205 aa		7.51	□□□□□ -1.21
NR4A1-222	ENST00000567890	PSORS1C2	Q9UIG4	136 aa		7.51	□□□□□ -1.21
NR4A1-222	ENST00000567890	IGIP	A6NJ69	53 aa		7.5	□□□□□ -1.21
NR4A1-222	ENST00000567890	PRSS2	P07478	247 aa		7.5	□□□□□ -1.21
NR4A1-222	ENST00000567890	HERVK_113	P63121	156 aa		7.5	□□□□□ -1.21
NR4A1-222	ENST00000567890	COX19	Q49B96	90 aa		7.5	□□□□□ -1.21
NR4A1-222	ENST00000567890	TIMM17A	Q99595	171 aa		7.5	□□□□□ -1.21
NR4A1-222	ENST00000567890	C6orf48	Q9UBA6	75 aa		7.5	□□□□□ -1.21
NR4A1-222	ENST00000567890	S100P	P25815	95 aa		7.49	□□□□□ -1.21
NR4A1-222	ENST00000567890	KRTAP10-8	P60410	259 aa		7.49	□□□□□ -1.21
NR4A1-222	ENST00000567890	CKS1B	P61024	79 aa		7.49	□□□□□ -1.21
NR4A1-222	ENST00000567890	GAGE2E	Q4V326	116 aa		7.49	□□□□□ -1.21
NR4A1-222	ENST00000567890	C1orf137	Q5JT78	98 aa		7.49	□□□□□ -1.21
NR4A1-222	ENST00000567890		Q8IZM0	81 aa		7.49	□□□□□ -1.21
NR4A1-222	ENST00000567890	DIRC1	Q969H9	104 aa		7.49	□□□□□ -1.21
NR4A1-222	ENST00000567890	GAGE2D	Q9UEU5	116 aa		7.49	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms