RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 ORAOV1Q8WV07 137 aa7.6□□□□□ -1.19
GTF3C1-208ENST00000567843 PRELID3AQ96N28 172 aa7.6□□□□□ -1.19
GTF3C1-208ENST00000567843 PKIGQ9Y2B9 76 aa7.6□□□□□ -1.19
GTF3C1-208ENST00000567843 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.59□□□□□ -1.19
GTF3C1-208ENST00000567843 APOMO95445 188 aa7.59□□□□□ -1.19
GTF3C1-208ENST00000567843 ORMDL3Q8N138 153 aa7.59□□□□□ -1.19
GTF3C1-208ENST00000567843 SPANXA1Q9NS26 97 aa7.59□□□□□ -1.19
GTF3C1-208ENST00000567843 RAB5AP20339 215 aa7.58□□□□□ -1.2
GTF3C1-208ENST00000567843 C9orf116Q5BN46 136 aaPredicted RBP7.58□□□□□ -1.2
GTF3C1-208ENST00000567843 C2orf48Q96LS8 159 aa7.58□□□□□ -1.2
GTF3C1-208ENST00000567843 IGHV3OR16-9A0A0B4J2B5 98 aa7.57□□□□□ -1.2
GTF3C1-208ENST00000567843 PPBPP02775 128 aa7.57□□□□□ -1.2
GTF3C1-208ENST00000567843 C10orf25Q5T742 122 aa7.57□□□□□ -1.2
GTF3C1-208ENST00000567843 ZC2HC1BQ5TFG8 222 aa7.57□□□□□ -1.2
GTF3C1-208ENST00000567843 Q6ZRP5 223 aa7.57□□□□□ -1.2
GTF3C1-208ENST00000567843 PHF5AQ7RTV0 110 aaKnown RBP7.57□□□□□ -1.2
GTF3C1-208ENST00000567843 MRPS36P82909 103 aaKnown RBP7.56□□□□□ -1.2
GTF3C1-208ENST00000567843 UNQ6190/PRO20217Q6UXQ8 127 aa7.56□□□□□ -1.2
GTF3C1-208ENST00000567843 ATP5L2Q7Z4Y8 100 aa7.56□□□□□ -1.2
GTF3C1-208ENST00000567843 LINC01600Q96MT4 127 aa7.56□□□□□ -1.2
GTF3C1-208ENST00000567843 IFI27P40305 119 aaPredicted RBP7.55□□□□□ -1.2
GTF3C1-208ENST00000567843 SPINK6Q6UWN8 80 aa7.55□□□□□ -1.2
GTF3C1-208ENST00000567843 OR10D4PQ8NGN7 298 aa7.55□□□□□ -1.2
GTF3C1-208ENST00000567843 LRP2P98164 4655 aa7.54□□□□□ -1.2
GTF3C1-208ENST00000567843 IGLV4-3A0A075B6K6 122 aa7.54□□□□□ -1.2
GTF3C1-208ENST00000567843 FAM168BA1KXE4 195 aa7.54□□□□□ -1.2
GTF3C1-208ENST00000567843 NDUFA1O15239 70 aa7.54□□□□□ -1.2
GTF3C1-208ENST00000567843 MT-ND4LP03901 98 aa7.54□□□□□ -1.2
GTF3C1-208ENST00000567843 RAB14P61106 215 aa7.54□□□□□ -1.2
GTF3C1-208ENST00000567843 SRSF9Q13242 221 aaKnown RBP eCLIP7.54□□□□□ -1.2
GTF3C1-208ENST00000567843 TGIF2-C20orf24A0A0A6YYL0 155 aa7.53□□□□□ -1.2
GTF3C1-208ENST00000567843 MT-ND6P03923 174 aa7.53□□□□□ -1.2
GTF3C1-208ENST00000567843 GAGE2EQ4V326 116 aa7.53□□□□□ -1.2
GTF3C1-208ENST00000567843 LINC00242Q5T6M2 205 aa7.53□□□□□ -1.2
GTF3C1-208ENST00000567843 MAP1LC3AQ9H492 121 aa7.53□□□□□ -1.2
GTF3C1-208ENST00000567843 MRPL35Q9NZE8 188 aaKnown RBP7.53□□□□□ -1.2
GTF3C1-208ENST00000567843 C6orf48Q9UBA6 75 aa7.53□□□□□ -1.2
GTF3C1-208ENST00000567843 GAGE2DQ9UEU5 116 aa7.53□□□□□ -1.2
GTF3C1-208ENST00000567843 PSORS1C2Q9UIG4 136 aa7.53□□□□□ -1.2
GTF3C1-208ENST00000567843 PNRC1Q12796 327 aaPredicted RBP7.52□□□□□ -1.21
GTF3C1-208ENST00000567843 RNF151Q2KHN1 245 aa7.52□□□□□ -1.21
GTF3C1-208ENST00000567843 C1orf137Q5JT78 98 aa7.52□□□□□ -1.21
GTF3C1-208ENST00000567843 REG3GQ6UW15 175 aa7.52□□□□□ -1.21
GTF3C1-208ENST00000567843 C2orf82Q6UX34 121 aa7.52□□□□□ -1.21
GTF3C1-208ENST00000567843 A0A087WZ39 114 aa7.51□□□□□ -1.21
GTF3C1-208ENST00000567843 KIAA0087Q14695 138 aa7.51□□□□□ -1.21
GTF3C1-208ENST00000567843 C2orf66Q6UXQ4 117 aa7.51□□□□□ -1.21
GTF3C1-208ENST00000567843 TEX43Q6ZNM6 134 aa7.51□□□□□ -1.21
GTF3C1-208ENST00000567843 FAM19A5Q7Z5A7 132 aaPredicted RBP7.51□□□□□ -1.21
GTF3C1-208ENST00000567843 KRTAP11-1Q8IUC1 163 aa7.51□□□□□ -1.21
GTF3C1-208ENST00000567843 Q8N8P6 123 aa7.51□□□□□ -1.21
GTF3C1-208ENST00000567843 ANAPC16Q96DE5 110 aa7.51□□□□□ -1.21
GTF3C1-208ENST00000567843 TMEM141Q96I45 108 aa7.51□□□□□ -1.21
GTF3C1-208ENST00000567843 IMMP2LQ96T52 175 aa7.51□□□□□ -1.21
GTF3C1-208ENST00000567843 PYGO1Q9Y3Y4 419 aa7.51□□□□□ -1.21
GTF3C1-208ENST00000567843 PRSS47A8MTI9 375 aa7.5□□□□□ -1.21
GTF3C1-208ENST00000567843 UBE2D1P51668 147 aa7.5□□□□□ -1.21
GTF3C1-208ENST00000567843 KRTAP10-8P60410 259 aa7.5□□□□□ -1.21
GTF3C1-208ENST00000567843 CYSLTR1Q9Y271 337 aa7.5□□□□□ -1.21
GTF3C1-208ENST00000567843 KIAA1644Q3SXP7 199 aa7.49□□□□□ -1.21
GTF3C1-208ENST00000567843 LINC00173Q6ZV60 143 aa7.49□□□□□ -1.21
GTF3C1-208ENST00000567843 CTDSP1Q9GZU7 261 aa7.49□□□□□ -1.21
GTF3C1-208ENST00000567843 VCX2Q9H322 139 aa7.49□□□□□ -1.21
GTF3C1-208ENST00000567843 TOMM7Q9P0U1 55 aa7.49□□□□□ -1.21
GTF3C1-208ENST00000567843 LAMTOR2Q9Y2Q5 125 aa7.49□□□□□ -1.21
GTF3C1-208ENST00000567843 Q6ZN92 141 aa7.48□□□□□ -1.21
GTF3C1-208ENST00000567843 KRTAP7-1Q8IUC3 87 aa7.48□□□□□ -1.21
GTF3C1-208ENST00000567843 C2orf88Q9BSF0 95 aa7.48□□□□□ -1.21
GTF3C1-208ENST00000567843 F8WDY8 70 aa7.47□□□□□ -1.21
GTF3C1-208ENST00000567843 TLX1NBP0CAT3 122 aa7.47□□□□□ -1.21
GTF3C1-208ENST00000567843 ADCYAP1P18509 176 aa7.47□□□□□ -1.21
GTF3C1-208ENST00000567843 ORMDL2Q53FV1 153 aa7.47□□□□□ -1.21
GTF3C1-208ENST00000567843 PACRGQ96M98 296 aaPredicted RBP7.47□□□□□ -1.21
GTF3C1-208ENST00000567843 RNF213Q63HN8 5207 aa7.46□□□□□ -1.21
GTF3C1-208ENST00000567843 IGIPA6NJ69 53 aa7.46□□□□□ -1.22
GTF3C1-208ENST00000567843 CLLU1Q5K131 121 aa7.46□□□□□ -1.22
GTF3C1-208ENST00000567843 LINC00469Q8N7U9 141 aa7.46□□□□□ -1.22
GTF3C1-208ENST00000567843 AMELXQ99217 191 aa7.46□□□□□ -1.22
GTF3C1-208ENST00000567843 M0QXV9 152 aa7.45□□□□□ -1.22
GTF3C1-208ENST00000567843 IGLV7-43P04211 117 aa7.45□□□□□ -1.22
GTF3C1-208ENST00000567843 PRSS2P07478 247 aa7.45□□□□□ -1.22
GTF3C1-208ENST00000567843 UBE2BP63146 152 aa7.45□□□□□ -1.22
GTF3C1-208ENST00000567843 C9orf129Q5T035 196 aaKnown RBP7.45□□□□□ -1.22
GTF3C1-208ENST00000567843 TRBV30A0A0K0K1B3 111 aa7.44□□□□□ -1.22
GTF3C1-208ENST00000567843 NDUFC2-KCTD14E9PQ53 114 aa7.44□□□□□ -1.22
GTF3C1-208ENST00000567843 CKS1BP61024 79 aa7.44□□□□□ -1.22
GTF3C1-208ENST00000567843 C6orf226Q5I0X4 101 aa7.44□□□□□ -1.22
GTF3C1-208ENST00000567843 PRR26Q8N8Z3 221 aa7.44□□□□□ -1.22
GTF3C1-208ENST00000567843 NXT2Q9NPJ8 142 aaKnown RBP7.44□□□□□ -1.22
GTF3C1-208ENST00000567843 CDKN2A-AS1Q9UH64 79 aa7.44□□□□□ -1.22
GTF3C1-208ENST00000567843 TMEM218A2RU14 115 aa7.43□□□□□ -1.22
GTF3C1-208ENST00000567843 IFITM2Q01629 132 aa7.43□□□□□ -1.22
GTF3C1-208ENST00000567843 ALKBH7Q9BT30 221 aaPredicted RBP7.43□□□□□ -1.22
GTF3C1-208ENST00000567843 XAGE1AQ9HD64 81 aa7.43□□□□□ -1.22
GTF3C1-208ENST00000567843 LINC01561Q8N1V8 128 aa7.42□□□□□ -1.22
GTF3C1-208ENST00000567843 SCGB3A1Q96QR1 104 aa7.42□□□□□ -1.22
GTF3C1-208ENST00000567843 GEMIN7Q9H840 131 aaKnown RBP7.42□□□□□ -1.22
GTF3C1-208ENST00000567843 K7EMI3 77 aa7.41□□□□□ -1.22
GTF3C1-208ENST00000567843 HERVK_113P63121 156 aa7.41□□□□□ -1.22
GTF3C1-208ENST00000567843 DIRC1Q969H9 104 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms