RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 RNF213Q63HN8 5207 aa7.07□□□□□ -1.28
CDH3-206ENST00000567674 LOC107984640A0A0U1RRK4 108 aa7.07□□□□□ -1.28
CDH3-206ENST00000567674 NPYP01303 97 aa7.07□□□□□ -1.28
CDH3-206ENST00000567674 ORMDL2Q53FV1 153 aa7.07□□□□□ -1.28
CDH3-206ENST00000567674 PAPPA-AS1Q5QFB9 102 aa7.07□□□□□ -1.28
CDH3-206ENST00000567674 PRSS3P2Q8NHM4 247 aa7.07□□□□□ -1.28
CDH3-206ENST00000567674 MAP1LC3AQ9H492 121 aa7.07□□□□□ -1.28
CDH3-206ENST00000567674 LRP1Q07954 4544 aaKnown RBP7.06□□□□□ -1.28
CDH3-206ENST00000567674 TRAV13-1A0A0B4J241 112 aa7.06□□□□□ -1.28
CDH3-206ENST00000567674 ODF1Q14990 250 aa7.06□□□□□ -1.28
CDH3-206ENST00000567674 MAJINQ3KP22 176 aa7.06□□□□□ -1.28
CDH3-206ENST00000567674 COX19Q49B96 90 aa7.06□□□□□ -1.28
CDH3-206ENST00000567674 STPG4Q8N801 248 aa7.06□□□□□ -1.28
CDH3-206ENST00000567674 Q8N8P6 123 aa7.06□□□□□ -1.28
CDH3-206ENST00000567674 NXT2Q9NPJ8 142 aaKnown RBP7.06□□□□□ -1.28
CDH3-206ENST00000567674 MRPL35Q9NZE8 188 aaKnown RBP7.06□□□□□ -1.28
CDH3-206ENST00000567674 PKHD1L1Q86WI1 4243 aa7.06□□□□□ -1.28
CDH3-206ENST00000567674 TMEM218A2RU14 115 aa7.05□□□□□ -1.28
CDH3-206ENST00000567674 PTTG1IPP53801 180 aa7.05□□□□□ -1.28
CDH3-206ENST00000567674 SEC11AP67812 179 aa7.05□□□□□ -1.28
CDH3-206ENST00000567674 Q6ZUT4 128 aa7.05□□□□□ -1.28
CDH3-206ENST00000567674 FAM104AQ969W3 186 aa7.05□□□□□ -1.28
CDH3-206ENST00000567674 CAMK2N2Q96S95 79 aa7.05□□□□□ -1.28
CDH3-206ENST00000567674 SEC11CQ9BY50 192 aa7.05□□□□□ -1.28
CDH3-206ENST00000567674 A0A087WZ39 114 aa7.04□□□□□ -1.28
CDH3-206ENST00000567674 A0A096LNI7 61 aa7.04□□□□□ -1.28
CDH3-206ENST00000567674 IFITM10A6NMD0 228 aa7.04□□□□□ -1.28
CDH3-206ENST00000567674 TLX1NBP0CAT3 122 aa7.04□□□□□ -1.28
CDH3-206ENST00000567674 RPL39P62891 51 aaKnown RBP7.04□□□□□ -1.28
CDH3-206ENST00000567674 Q6ZN92 141 aa7.04□□□□□ -1.28
CDH3-206ENST00000567674 FAM19A3Q7Z5A8 133 aa7.04□□□□□ -1.28
CDH3-206ENST00000567674 TMEM141Q96I45 108 aa7.04□□□□□ -1.28
CDH3-206ENST00000567674 CYSLTR1Q9Y271 337 aa7.04□□□□□ -1.28
CDH3-206ENST00000567674 TGIF2-C20orf24A0A0A6YYL0 155 aa7.03□□□□□ -1.28
CDH3-206ENST00000567674 CHTF8P0CG12 524 aa7.03□□□□□ -1.28
CDH3-206ENST00000567674 TEX43Q6ZNM6 134 aa7.03□□□□□ -1.28
CDH3-206ENST00000567674 C2orf88Q9BSF0 95 aa7.03□□□□□ -1.28
CDH3-206ENST00000567674 IGKV2-24A0A0C4DH68 120 aa7.02□□□□□ -1.29
CDH3-206ENST00000567674 NDUFA1O15239 70 aa7.02□□□□□ -1.29
CDH3-206ENST00000567674 SPINK6Q6UWN8 80 aa7.02□□□□□ -1.29
CDH3-206ENST00000567674 Q6ZRP5 223 aa7.02□□□□□ -1.29
CDH3-206ENST00000567674 C5orf38Q86SI9 138 aa7.02□□□□□ -1.29
CDH3-206ENST00000567674 AMELXQ99217 191 aa7.02□□□□□ -1.29
CDH3-206ENST00000567674 IGLV4-3A0A075B6K6 122 aa7.01□□□□□ -1.29
CDH3-206ENST00000567674 TRBV30A0A0K0K1B3 111 aa7.01□□□□□ -1.29
CDH3-206ENST00000567674 S100PP25815 95 aa7.01□□□□□ -1.29
CDH3-206ENST00000567674 SPAG11BQ08648 103 aa7.01□□□□□ -1.29
CDH3-206ENST00000567674 LINC00242Q5T6M2 205 aa7.01□□□□□ -1.29
CDH3-206ENST00000567674 C2orf66Q6UXQ4 117 aa7.01□□□□□ -1.29
CDH3-206ENST00000567674 TIMM17AQ99595 171 aa7.01□□□□□ -1.29
CDH3-206ENST00000567674 GNB1LQ9BYB4 327 aa7.01□□□□□ -1.29
CDH3-206ENST00000567674 VCX2Q9H322 139 aa7.01□□□□□ -1.29
CDH3-206ENST00000567674 IGIPA6NJ69 53 aa7□□□□□ -1.29
CDH3-206ENST00000567674 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7□□□□□ -1.29
CDH3-206ENST00000567674 MT-ND6P03923 174 aa7□□□□□ -1.29
CDH3-206ENST00000567674 UBE2D1P51668 147 aa7□□□□□ -1.29
CDH3-206ENST00000567674 PRR3P79522 188 aaKnown RBP7□□□□□ -1.29
CDH3-206ENST00000567674 RNASE13Q5GAN3 156 aaKnown RBP7□□□□□ -1.29
CDH3-206ENST00000567674 C10orf91Q5T1B1 145 aa7□□□□□ -1.29
CDH3-206ENST00000567674 ORAOV1Q8WV07 137 aa7□□□□□ -1.29
CDH3-206ENST00000567674 LINC01546A6NGU7 62 aa6.99□□□□□ -1.29
CDH3-206ENST00000567674 HERVK_113P63121 156 aa6.99□□□□□ -1.29
CDH3-206ENST00000567674 LOC389332A0A1B0GUA5 103 aa6.98□□□□□ -1.29
CDH3-206ENST00000567674 HNRNPA3P51991 378 aaKnown RBP6.98□□□□□ -1.29
CDH3-206ENST00000567674 IFITM2Q01629 132 aa6.98□□□□□ -1.29
CDH3-206ENST00000567674 SRSF9Q13242 221 aaKnown RBP eCLIP6.98□□□□□ -1.29
CDH3-206ENST00000567674 KIAA0087Q14695 138 aa6.98□□□□□ -1.29
CDH3-206ENST00000567674 RHEBQ15382 184 aa6.98□□□□□ -1.29
CDH3-206ENST00000567674 REG3GQ6UW15 175 aa6.98□□□□□ -1.29
CDH3-206ENST00000567674 ERASQ7Z444 233 aa6.98□□□□□ -1.29
CDH3-206ENST00000567674 TOMM6Q96B49 74 aa6.98□□□□□ -1.29
CDH3-206ENST00000567674 LINC00526Q96FQ7 95 aa6.98□□□□□ -1.29
CDH3-206ENST00000567674 LINC01600Q96MT4 127 aa6.98□□□□□ -1.29
CDH3-206ENST00000567674 ADCYAP1P18509 176 aa6.97□□□□□ -1.29
CDH3-206ENST00000567674 GAGE2BQ13066 116 aa6.97□□□□□ -1.29
CDH3-206ENST00000567674 Q8IZM0 81 aa6.97□□□□□ -1.29
CDH3-206ENST00000567674 OPRPNQ99935 248 aaPredicted RBP6.97□□□□□ -1.29
CDH3-206ENST00000567674 CARHSP1Q9Y2V2 147 aaKnown RBP6.97□□□□□ -1.29
CDH3-206ENST00000567674 C9orf116Q5BN46 136 aaPredicted RBP6.96□□□□□ -1.3
CDH3-206ENST00000567674 NDUFC2-KCTD14E9PQ53 114 aa6.95□□□□□ -1.3
CDH3-206ENST00000567674 CXCL5P42830 114 aa6.95□□□□□ -1.3
CDH3-206ENST00000567674 LINC00173Q6ZV60 143 aa6.95□□□□□ -1.3
CDH3-206ENST00000567674 PACRGQ96M98 296 aaPredicted RBP6.95□□□□□ -1.3
CDH3-206ENST00000567674 A0A1W2PNN7 141 aa6.94□□□□□ -1.3
CDH3-206ENST00000567674 PRSS2P07478 247 aa6.94□□□□□ -1.3
CDH3-206ENST00000567674 MT1HL1P0DM35 61 aa6.94□□□□□ -1.3
CDH3-206ENST00000567674 RPL18AQ02543 176 aaKnown RBP6.94□□□□□ -1.3
CDH3-206ENST00000567674 ALKBH7Q9BT30 221 aaPredicted RBP6.94□□□□□ -1.3
CDH3-206ENST00000567674 TINCRA0A1B0GVN0 87 aa6.93□□□□□ -1.3
CDH3-206ENST00000567674 C6orf226Q5I0X4 101 aa6.93□□□□□ -1.3
CDH3-206ENST00000567674 UNQ6190/PRO20217Q6UXQ8 127 aa6.93□□□□□ -1.3
CDH3-206ENST00000567674 C6orf48Q9UBA6 75 aa6.93□□□□□ -1.3
CDH3-206ENST00000567674 A0A0J9YXV3 536 aa6.92□□□□□ -1.3
CDH3-206ENST00000567674 CKS1BP61024 79 aa6.92□□□□□ -1.3
CDH3-206ENST00000567674 COMMD7Q86VX2 200 aa6.92□□□□□ -1.3
CDH3-206ENST00000567674 SCGB3A1Q96QR1 104 aa6.92□□□□□ -1.3
CDH3-206ENST00000567674 MRPL18Q9H0U6 180 aaKnown RBP6.92□□□□□ -1.3
CDH3-206ENST00000567674 GEMIN7Q9H840 131 aaKnown RBP6.92□□□□□ -1.3
CDH3-206ENST00000567674 TNXBP22105 4242 aa6.91□□□□□ -1.3
CDH3-206ENST00000567674 IGLV5-45A0A087WSX0 123 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms