RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 LINC00526Q96FQ7 95 aa9.43□□□□□ -0.9
CMTM3-212ENST00000566121 MRPL35Q9NZE8 188 aaKnown RBP9.43□□□□□ -0.9
CMTM3-212ENST00000566121 LAMTOR2Q9Y2Q5 125 aa9.43□□□□□ -0.9
CMTM3-212ENST00000566121 D6R8Y8 96 aa9.42□□□□□ -0.9
CMTM3-212ENST00000566121 KRTAP10-8P60410 259 aa9.42□□□□□ -0.9
CMTM3-212ENST00000566121 CAMK2N2Q96S95 79 aa9.42□□□□□ -0.9
CMTM3-212ENST00000566121 A0A0J9YXV3 536 aa9.41□□□□□ -0.9
CMTM3-212ENST00000566121 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.41□□□□□ -0.9
CMTM3-212ENST00000566121 TLX1NBP0CAT3 122 aa9.41□□□□□ -0.9
CMTM3-212ENST00000566121 REG3GQ6UW15 175 aa9.41□□□□□ -0.9
CMTM3-212ENST00000566121 ORMDL3Q8N138 153 aa9.41□□□□□ -0.9
CMTM3-212ENST00000566121 NPSP0C0P6 89 aa9.4□□□□□ -0.9
CMTM3-212ENST00000566121 RPL39P62891 51 aaKnown RBP9.4□□□□□ -0.9
CMTM3-212ENST00000566121 PNRC1Q12796 327 aaPredicted RBP9.4□□□□□ -0.9
CMTM3-212ENST00000566121 TMEM136Q6ZRR5 245 aa9.4□□□□□ -0.9
CMTM3-212ENST00000566121 C5orf38Q86SI9 138 aa9.4□□□□□ -0.9
CMTM3-212ENST00000566121 LINC01561Q8N1V8 128 aa9.4□□□□□ -0.9
CMTM3-212ENST00000566121 IMMP2LQ96T52 175 aa9.4□□□□□ -0.9
CMTM3-212ENST00000566121 A0A1W2PNN7 141 aa9.39□□□□□ -0.91
CMTM3-212ENST00000566121 K7EMI3 77 aa9.39□□□□□ -0.91
CMTM3-212ENST00000566121 NPYP01303 97 aa9.39□□□□□ -0.91
CMTM3-212ENST00000566121 MRPL54Q6P161 138 aaKnown RBP9.39□□□□□ -0.91
CMTM3-212ENST00000566121 SPAG11BQ08648 103 aa9.38□□□□□ -0.91
CMTM3-212ENST00000566121 ODF1Q14990 250 aa9.38□□□□□ -0.91
CMTM3-212ENST00000566121 RNASE13Q5GAN3 156 aaKnown RBP9.38□□□□□ -0.91
CMTM3-212ENST00000566121 ANAPC16Q96DE5 110 aa9.38□□□□□ -0.91
CMTM3-212ENST00000566121 A0A087WZ39 114 aa9.37□□□□□ -0.91
CMTM3-212ENST00000566121 RAB5AP20339 215 aa9.37□□□□□ -0.91
CMTM3-212ENST00000566121 GAGE2BQ13066 116 aa9.37□□□□□ -0.91
CMTM3-212ENST00000566121 PRELID3AQ96N28 172 aa9.37□□□□□ -0.91
CMTM3-212ENST00000566121 IFI27P40305 119 aaPredicted RBP9.36□□□□□ -0.91
CMTM3-212ENST00000566121 C9orf116Q5BN46 136 aaPredicted RBP9.36□□□□□ -0.91
CMTM3-212ENST00000566121 IFITM10A6NMD0 228 aa9.35□□□□□ -0.91
CMTM3-212ENST00000566121 NDUFA1O15239 70 aa9.35□□□□□ -0.91
CMTM3-212ENST00000566121 MT-ND4LP03901 98 aa9.35□□□□□ -0.91
CMTM3-212ENST00000566121 KIAA0087Q14695 138 aa9.35□□□□□ -0.91
CMTM3-212ENST00000566121 IGLV4-3A0A075B6K6 122 aa9.34□□□□□ -0.91
CMTM3-212ENST00000566121 TGIF2-C20orf24A0A0A6YYL0 155 aa9.34□□□□□ -0.91
CMTM3-212ENST00000566121 RAB14P61106 215 aa9.34□□□□□ -0.91
CMTM3-212ENST00000566121 LINC00242Q5T6M2 205 aa9.34□□□□□ -0.91
CMTM3-212ENST00000566121 FAM19A3Q7Z5A8 133 aa9.34□□□□□ -0.91
CMTM3-212ENST00000566121 ORAOV1Q8WV07 137 aa9.34□□□□□ -0.91
CMTM3-212ENST00000566121 OPRPNQ99935 248 aaPredicted RBP9.34□□□□□ -0.91
CMTM3-212ENST00000566121 TRBV30A0A0K0K1B3 111 aa9.33□□□□□ -0.92
CMTM3-212ENST00000566121 CLLU1Q5K131 121 aa9.33□□□□□ -0.92
CMTM3-212ENST00000566121 Q8N8P6 123 aa9.33□□□□□ -0.92
CMTM3-212ENST00000566121 TMEM141Q96I45 108 aa9.33□□□□□ -0.92
CMTM3-212ENST00000566121 AMELXQ99217 191 aa9.33□□□□□ -0.92
CMTM3-212ENST00000566121 PSORS1C2Q9UIG4 136 aa9.33□□□□□ -0.92
CMTM3-212ENST00000566121 G0S2P27469 103 aa9.32□□□□□ -0.92
CMTM3-212ENST00000566121 ORMDL2Q53FV1 153 aa9.32□□□□□ -0.92
CMTM3-212ENST00000566121 MAP1LC3AQ9H492 121 aa9.32□□□□□ -0.92
CMTM3-212ENST00000566121 RNF213Q63HN8 5207 aa9.31□□□□□ -0.92
CMTM3-212ENST00000566121 UBE2D1P51668 147 aa9.31□□□□□ -0.92
CMTM3-212ENST00000566121 RPL18AQ02543 176 aaKnown RBP9.31□□□□□ -0.92
CMTM3-212ENST00000566121 C10orf25Q5T742 122 aa9.3□□□□□ -0.92
CMTM3-212ENST00000566121 UNQ6190/PRO20217Q6UXQ8 127 aa9.3□□□□□ -0.92
CMTM3-212ENST00000566121 TEX43Q6ZNM6 134 aa9.3□□□□□ -0.92
CMTM3-212ENST00000566121 C6orf48Q9UBA6 75 aa9.3□□□□□ -0.92
CMTM3-212ENST00000566121 CYSLTR1Q9Y271 337 aa9.3□□□□□ -0.92
CMTM3-212ENST00000566121 MT-ND6P03923 174 aa9.29□□□□□ -0.92
CMTM3-212ENST00000566121 NDUFA5Q16718 116 aa9.29□□□□□ -0.92
CMTM3-212ENST00000566121 PAPPA-AS1Q5QFB9 102 aa9.29□□□□□ -0.92
CMTM3-212ENST00000566121 C2orf66Q6UXQ4 117 aa9.29□□□□□ -0.92
CMTM3-212ENST00000566121 C2orf88Q9BSF0 95 aa9.29□□□□□ -0.92
CMTM3-212ENST00000566121 NXT2Q9NPJ8 142 aaKnown RBP9.29□□□□□ -0.92
CMTM3-212ENST00000566121 IGIPA6NJ69 53 aa9.28□□□□□ -0.92
CMTM3-212ENST00000566121 NDUFC2-KCTD14E9PQ53 114 aa9.28□□□□□ -0.92
CMTM3-212ENST00000566121 SEC11AP67812 179 aa9.28□□□□□ -0.92
CMTM3-212ENST00000566121 TRAV9-1A0A075B6T8 112 aa9.27□□□□□ -0.93
CMTM3-212ENST00000566121 LINC01549A6NIU2 74 aa9.27□□□□□ -0.93
CMTM3-212ENST00000566121 Q6ZN92 141 aa9.27□□□□□ -0.93
CMTM3-212ENST00000566121 LINC00173Q6ZV60 143 aa9.27□□□□□ -0.93
CMTM3-212ENST00000566121 PHF5AQ7RTV0 110 aaKnown RBP9.27□□□□□ -0.93
CMTM3-212ENST00000566121 VCX2Q9H322 139 aa9.27□□□□□ -0.93
CMTM3-212ENST00000566121 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
CMTM3-212ENST00000566121 C1orf137Q5JT78 98 aa9.26□□□□□ -0.93
CMTM3-212ENST00000566121 DIRC1Q969H9 104 aa9.26□□□□□ -0.93
CMTM3-212ENST00000566121 TIMM17AQ99595 171 aa9.26□□□□□ -0.93
CMTM3-212ENST00000566121 CTDSP1Q9GZU7 261 aa9.26□□□□□ -0.93
CMTM3-212ENST00000566121 LOC389332A0A1B0GUA5 103 aa9.25□□□□□ -0.93
CMTM3-212ENST00000566121 UQCC3Q6UW78 93 aa9.25□□□□□ -0.93
CMTM3-212ENST00000566121 KRTAP7-1Q8IUC3 87 aa9.24□□□□□ -0.93
CMTM3-212ENST00000566121 Q8IZM0 81 aa9.24□□□□□ -0.93
CMTM3-212ENST00000566121 PACRGQ96M98 296 aaPredicted RBP9.24□□□□□ -0.93
CMTM3-212ENST00000566121 LINC01546A6NGU7 62 aa9.23□□□□□ -0.93
CMTM3-212ENST00000566121 HERVK_113P63121 156 aa9.23□□□□□ -0.93
CMTM3-212ENST00000566121 TOMM6Q96B49 74 aa9.23□□□□□ -0.93
CMTM3-212ENST00000566121 FAM168BA1KXE4 195 aa9.21□□□□□ -0.94
CMTM3-212ENST00000566121 H0Y9J4 135 aa9.21□□□□□ -0.94
CMTM3-212ENST00000566121 GAGE2EQ4V326 116 aa9.21□□□□□ -0.94
CMTM3-212ENST00000566121 ERASQ7Z444 233 aa9.21□□□□□ -0.94
CMTM3-212ENST00000566121 COMMD7Q86VX2 200 aa9.21□□□□□ -0.94
CMTM3-212ENST00000566121 GAGE2DQ9UEU5 116 aa9.21□□□□□ -0.94
CMTM3-212ENST00000566121 IGLV1-50A0A075B6I6 118 aa9.2□□□□□ -0.94
CMTM3-212ENST00000566121 TMEM218A2RU14 115 aa9.2□□□□□ -0.94
CMTM3-212ENST00000566121 PRSS2P07478 247 aa9.2□□□□□ -0.94
CMTM3-212ENST00000566121 C6orf226Q5I0X4 101 aa9.2□□□□□ -0.94
CMTM3-212ENST00000566121 C9orf129Q5T035 196 aaKnown RBP9.2□□□□□ -0.94
CMTM3-212ENST00000566121 C2orf82Q6UX34 121 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms