RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 SNAI2O43623 268 aa4.82□□□□□ -1.64
SMPD3-206ENST00000566009 ESDP10768 282 aa4.82□□□□□ -1.64
SMPD3-206ENST00000566009 GNG4P50150 75 aa4.82□□□□□ -1.64
SMPD3-206ENST00000566009 RPS20P60866 119 aaKnown RBP4.82□□□□□ -1.64
SMPD3-206ENST00000566009 OR10AG1Q8NH19 301 aa4.82□□□□□ -1.64
SMPD3-206ENST00000566009 SMIM12Q96EX1 92 aa4.82□□□□□ -1.64
SMPD3-206ENST00000566009 SEC11CQ9BY50 192 aa4.82□□□□□ -1.64
SMPD3-206ENST00000566009 XKRY2A2RUG3 117 aa4.81□□□□□ -1.64
SMPD3-206ENST00000566009 F2Z2F3 143 aa4.81□□□□□ -1.64
SMPD3-206ENST00000566009 SRP19P09132 144 aaKnown RBP4.81□□□□□ -1.64
SMPD3-206ENST00000566009 SMIM17P0DL12 118 aa4.81□□□□□ -1.64
SMPD3-206ENST00000566009 CENPWQ5EE01 88 aa4.81□□□□□ -1.64
SMPD3-206ENST00000566009 CBLN2Q8IUK8 224 aa4.81□□□□□ -1.64
SMPD3-206ENST00000566009 OR2D3Q8NGH3 330 aa4.81□□□□□ -1.64
SMPD3-206ENST00000566009 C2orf48Q96LS8 159 aa4.81□□□□□ -1.64
SMPD3-206ENST00000566009 MT1FP04733 61 aa4.8□□□□□ -1.64
SMPD3-206ENST00000566009 PEA15Q15121 130 aa4.8□□□□□ -1.64
SMPD3-206ENST00000566009 C4orf48Q5BLP8 95 aa4.8□□□□□ -1.64
SMPD3-206ENST00000566009 C3orf22Q8N5N4 141 aa4.8□□□□□ -1.64
SMPD3-206ENST00000566009 NUDT10Q8NFP7 164 aa4.8□□□□□ -1.64
SMPD3-206ENST00000566009 OCC1Q8TAD7 63 aa4.8□□□□□ -1.64
SMPD3-206ENST00000566009 NUDT11Q96G61 164 aa4.8□□□□□ -1.64
SMPD3-206ENST00000566009 PGLYRP4Q96LB8 373 aa4.8□□□□□ -1.64
SMPD3-206ENST00000566009 IGLC6P0CF74 106 aa4.79□□□□□ -1.64
SMPD3-206ENST00000566009 NTF3P20783 257 aa4.79□□□□□ -1.64
SMPD3-206ENST00000566009 GAGE2EQ4V326 116 aa4.79□□□□□ -1.64
SMPD3-206ENST00000566009 LYZL1Q6UWQ5 148 aa4.79□□□□□ -1.64
SMPD3-206ENST00000566009 SVBPQ8N300 66 aa4.79□□□□□ -1.64
SMPD3-206ENST00000566009 IMMP2LQ96T52 175 aa4.79□□□□□ -1.64
SMPD3-206ENST00000566009 TPPP3Q9BW30 176 aa4.79□□□□□ -1.64
SMPD3-206ENST00000566009 GAGE2DQ9UEU5 116 aa4.79□□□□□ -1.64
SMPD3-206ENST00000566009 NDUFA12Q9UI09 145 aa4.79□□□□□ -1.64
SMPD3-206ENST00000566009 TRBV20OR9-2A0A075B6H5 130 aa4.78□□□□□ -1.64
SMPD3-206ENST00000566009 LINC00959A0A1B0GUT2 108 aa4.78□□□□□ -1.64
SMPD3-206ENST00000566009 COLCA2A8K830 154 aa4.78□□□□□ -1.64
SMPD3-206ENST00000566009 BCE1O60756 84 aa4.78□□□□□ -1.64
SMPD3-206ENST00000566009 YPEL4Q96NS1 127 aa4.78□□□□□ -1.64
SMPD3-206ENST00000566009 EIF5A2Q9GZV4 153 aaKnown RBP4.78□□□□□ -1.64
SMPD3-206ENST00000566009 C7orf77A4D0Y5 90 aa4.77□□□□□ -1.65
SMPD3-206ENST00000566009 TMEM250H0YL14 139 aa4.77□□□□□ -1.65
SMPD3-206ENST00000566009 M0QY20 66 aa4.77□□□□□ -1.65
SMPD3-206ENST00000566009 SNAPINO95295 136 aa4.77□□□□□ -1.65
SMPD3-206ENST00000566009 TLX1NBP0CAT3 122 aa4.77□□□□□ -1.65
SMPD3-206ENST00000566009 TRGC1P0CF51 173 aa4.77□□□□□ -1.65
SMPD3-206ENST00000566009 TWIST1Q15672 202 aa4.77□□□□□ -1.65
SMPD3-206ENST00000566009 CD164L2Q6UWJ8 174 aa4.77□□□□□ -1.65
SMPD3-206ENST00000566009 AP1S3Q96PC3 154 aa4.77□□□□□ -1.65
SMPD3-206ENST00000566009 ZNF727A8MUV8 499 aa4.76□□□□□ -1.65
SMPD3-206ENST00000566009 K7EN84 100 aa4.76□□□□□ -1.65
SMPD3-206ENST00000566009 GATCO43716 136 aaKnown RBP4.76□□□□□ -1.65
SMPD3-206ENST00000566009 MGPP08493 103 aa4.76□□□□□ -1.65
SMPD3-206ENST00000566009 MALP21145 153 aa4.76□□□□□ -1.65
SMPD3-206ENST00000566009 AMMECR1LQ6DCA0 310 aa4.76□□□□□ -1.65
SMPD3-206ENST00000566009 RNASEKQ6P5S7 137 aaKnown RBP4.76□□□□□ -1.65
SMPD3-206ENST00000566009 RASL11AQ6T310 242 aa4.76□□□□□ -1.65
SMPD3-206ENST00000566009 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
SMPD3-206ENST00000566009 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
SMPD3-206ENST00000566009 RNASE7Q9H1E1 156 aaKnown RBP4.76□□□□□ -1.65
SMPD3-206ENST00000566009 SMDT1Q9H4I9 107 aa4.76□□□□□ -1.65
SMPD3-206ENST00000566009 NIT2Q9NQR4 276 aa4.76□□□□□ -1.65
SMPD3-206ENST00000566009 MRPL35Q9NZE8 188 aaKnown RBP4.76□□□□□ -1.65
SMPD3-206ENST00000566009 A8MWL6 223 aa4.75□□□□□ -1.65
SMPD3-206ENST00000566009 CEBPGP53567 150 aa4.75□□□□□ -1.65
SMPD3-206ENST00000566009 FOXA3P55318 350 aaPredicted RBP4.75□□□□□ -1.65
SMPD3-206ENST00000566009 KRTAP10-10P60014 251 aa4.75□□□□□ -1.65
SMPD3-206ENST00000566009 SUMO4Q6EEV6 95 aa4.75□□□□□ -1.65
SMPD3-206ENST00000566009 Q6Q795 121 aa4.75□□□□□ -1.65
SMPD3-206ENST00000566009 RPS10P5Q9NQ39 176 aa4.75□□□□□ -1.65
SMPD3-206ENST00000566009 FAM231DQ6ZW35 169 aa4.74□□□□□ -1.65
SMPD3-206ENST00000566009 SMIM15Q7Z3B0 74 aa4.74□□□□□ -1.65
SMPD3-206ENST00000566009 CNFNQ9BYD5 112 aa4.74□□□□□ -1.65
SMPD3-206ENST00000566009 SMCO4Q9NRQ5 59 aa4.74□□□□□ -1.65
SMPD3-206ENST00000566009 SPINK1P00995 79 aa4.73□□□□□ -1.65
SMPD3-206ENST00000566009 CTRLP40313 264 aa4.73□□□□□ -1.65
SMPD3-206ENST00000566009 COTL1Q14019 142 aa4.73□□□□□ -1.65
SMPD3-206ENST00000566009 TMEM241Q24JQ0 296 aa4.73□□□□□ -1.65
SMPD3-206ENST00000566009 GATD1Q8NB37 220 aa4.73□□□□□ -1.65
SMPD3-206ENST00000566009 SMIM7Q9BQ49 75 aa4.73□□□□□ -1.65
SMPD3-206ENST00000566009 C22orf24Q9Y442 160 aa4.73□□□□□ -1.65
SMPD3-206ENST00000566009 COX7A2LO14548 114 aa4.72□□□□□ -1.65
SMPD3-206ENST00000566009 LGALS3P17931 250 aaKnown RBP4.72□□□□□ -1.65
SMPD3-206ENST00000566009 SPAG11BQ08648 103 aa4.72□□□□□ -1.65
SMPD3-206ENST00000566009 RHEBQ15382 184 aa4.72□□□□□ -1.65
SMPD3-206ENST00000566009 C9orf129Q5T035 196 aaKnown RBP4.72□□□□□ -1.65
SMPD3-206ENST00000566009 C10orf25Q5T742 122 aa4.72□□□□□ -1.65
SMPD3-206ENST00000566009 KRTAP13-1Q8IUC0 172 aa4.72□□□□□ -1.65
SMPD3-206ENST00000566009 BORCS7Q96B45 105 aa4.72□□□□□ -1.65
SMPD3-206ENST00000566009 OSTCQ9NRP0 149 aa4.72□□□□□ -1.65
SMPD3-206ENST00000566009 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.71□□□□□ -1.66
SMPD3-206ENST00000566009 IGKV2-29A2NJV5 120 aaPredicted RBP4.71□□□□□ -1.66
SMPD3-206ENST00000566009 KRTAP5-9P26371 169 aa4.71□□□□□ -1.66
SMPD3-206ENST00000566009 RPL23P62829 140 aaKnown RBP4.71□□□□□ -1.66
SMPD3-206ENST00000566009 LBHQ53QV2 105 aaPredicted RBP4.71□□□□□ -1.66
SMPD3-206ENST00000566009 CT83Q5H943 113 aa4.71□□□□□ -1.66
SMPD3-206ENST00000566009 LINC01551Q86U37 167 aa4.71□□□□□ -1.66
SMPD3-206ENST00000566009 TGIF2-C20orf24A0A0A6YYL0 155 aa4.7□□□□□ -1.66
SMPD3-206ENST00000566009 A0A1B0GUT8 65 aa4.7□□□□□ -1.66
SMPD3-206ENST00000566009 MT-ND4LP03901 98 aa4.7□□□□□ -1.66
SMPD3-206ENST00000566009 RAB5AP20339 215 aa4.7□□□□□ -1.66
SMPD3-206ENST00000566009 PMCHP20382 165 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms