RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 RPS10P5Q9NQ39 176 aa12.67□□□□□ -0.38
CMTM3-211ENST00000565922 IGLV4-3A0A075B6K6 122 aa12.66□□□□□ -0.38
CMTM3-211ENST00000565922 MT-ND6P03923 174 aa12.66□□□□□ -0.38
CMTM3-211ENST00000565922 NPSP0C0P6 89 aa12.66□□□□□ -0.38
CMTM3-211ENST00000565922 CHTF8P0CG12 524 aa12.66□□□□□ -0.38
CMTM3-211ENST00000565922 TEX43Q6ZNM6 134 aa12.66□□□□□ -0.38
CMTM3-211ENST00000565922 LINC00526Q96FQ7 95 aa12.66□□□□□ -0.38
CMTM3-211ENST00000565922 C2orf88Q9BSF0 95 aa12.66□□□□□ -0.38
CMTM3-211ENST00000565922 LINC00474Q9P2X8 69 aa12.66□□□□□ -0.38
CMTM3-211ENST00000565922 RPL37AP61513 92 aaKnown RBP12.65□□□□□ -0.38
CMTM3-211ENST00000565922 NDUFA5Q16718 116 aa12.65□□□□□ -0.38
CMTM3-211ENST00000565922 OR10D4PQ8NGN7 298 aa12.65□□□□□ -0.38
CMTM3-211ENST00000565922 PRSS3P2Q8NHM4 247 aa12.65□□□□□ -0.38
CMTM3-211ENST00000565922 C2orf48Q96LS8 159 aa12.65□□□□□ -0.38
CMTM3-211ENST00000565922 IGLV4-69A0A075B6H9 119 aa12.64□□□□□ -0.39
CMTM3-211ENST00000565922 A0A087WYN8 130 aa12.64□□□□□ -0.39
CMTM3-211ENST00000565922 TGIF2-C20orf24A0A0A6YYL0 155 aa12.64□□□□□ -0.39
CMTM3-211ENST00000565922 IGHV3OR16-9A0A0B4J2B5 98 aa12.64□□□□□ -0.39
CMTM3-211ENST00000565922 KIAA1644Q3SXP7 199 aa12.64□□□□□ -0.39
CMTM3-211ENST00000565922 CAMK2N2Q96S95 79 aa12.64□□□□□ -0.39
CMTM3-211ENST00000565922 IGKV2-24A0A0C4DH68 120 aa12.63□□□□□ -0.39
CMTM3-211ENST00000565922 SPAG11BQ08648 103 aa12.63□□□□□ -0.39
CMTM3-211ENST00000565922 PAPPA-AS1Q5QFB9 102 aa12.63□□□□□ -0.39
CMTM3-211ENST00000565922 MAJINQ3KP22 176 aa12.62□□□□□ -0.39
CMTM3-211ENST00000565922 PLAC8Q9NZF1 115 aa12.62□□□□□ -0.39
CMTM3-211ENST00000565922 FLG2Q5D862 2391 aaPredicted RBP12.62□□□□□ -0.39
CMTM3-211ENST00000565922 F8WDY8 70 aa12.61□□□□□ -0.39
CMTM3-211ENST00000565922 ORAOV1Q8WV07 137 aa12.61□□□□□ -0.39
CMTM3-211ENST00000565922 VCX2Q9H322 139 aa12.61□□□□□ -0.39
CMTM3-211ENST00000565922 A0A096LNI7 61 aa12.6□□□□□ -0.39
CMTM3-211ENST00000565922 LINC01549A6NIU2 74 aa12.6□□□□□ -0.39
CMTM3-211ENST00000565922 SNAPINO95295 136 aa12.6□□□□□ -0.39
CMTM3-211ENST00000565922 KRTAP10-4P60372 401 aaPredicted RBP12.6□□□□□ -0.39
CMTM3-211ENST00000565922 SVBPQ8N300 66 aa12.6□□□□□ -0.39
CMTM3-211ENST00000565922 LOC107984640A0A0U1RRK4 108 aa12.59□□□□□ -0.39
CMTM3-211ENST00000565922 APOC3P02656 99 aa12.59□□□□□ -0.39
CMTM3-211ENST00000565922 LINC00242Q5T6M2 205 aa12.59□□□□□ -0.39
CMTM3-211ENST00000565922 Q6ZRU5 148 aa12.59□□□□□ -0.39
CMTM3-211ENST00000565922 C7orf33Q8WU49 177 aa12.59□□□□□ -0.39
CMTM3-211ENST00000565922 A0A087WZ39 114 aa12.58□□□□□ -0.4
CMTM3-211ENST00000565922 UBE2D1P51668 147 aa12.58□□□□□ -0.4
CMTM3-211ENST00000565922 STPG4Q8N801 248 aa12.58□□□□□ -0.4
CMTM3-211ENST00000565922 AMELXQ99217 191 aa12.58□□□□□ -0.4
CMTM3-211ENST00000565922 TIMM17AQ99595 171 aa12.58□□□□□ -0.4
CMTM3-211ENST00000565922 ALKBH7Q9BT30 221 aaPredicted RBP12.58□□□□□ -0.4
CMTM3-211ENST00000565922 MRPL18Q9H0U6 180 aaKnown RBP12.58□□□□□ -0.4
CMTM3-211ENST00000565922 IGIPA6NJ69 53 aa12.57□□□□□ -0.4
CMTM3-211ENST00000565922 FABP9Q0Z7S8 132 aa12.57□□□□□ -0.4
CMTM3-211ENST00000565922 RNF151Q2KHN1 245 aa12.57□□□□□ -0.4
CMTM3-211ENST00000565922 TOMM6Q96B49 74 aa12.57□□□□□ -0.4
CMTM3-211ENST00000565922 NDUFA1O15239 70 aa12.56□□□□□ -0.4
CMTM3-211ENST00000565922 SEC11AP67812 179 aa12.56□□□□□ -0.4
CMTM3-211ENST00000565922 LINC01561Q8N1V8 128 aa12.56□□□□□ -0.4
CMTM3-211ENST00000565922 PTTG1IPP53801 180 aa12.55□□□□□ -0.4
CMTM3-211ENST00000565922 LINC00173Q6ZV60 143 aa12.55□□□□□ -0.4
CMTM3-211ENST00000565922 SMCO4Q9NRQ5 59 aa12.55□□□□□ -0.4
CMTM3-211ENST00000565922 MRPL35Q9NZE8 188 aaKnown RBP12.55□□□□□ -0.4
CMTM3-211ENST00000565922 LINC01546A6NGU7 62 aa12.54□□□□□ -0.4
CMTM3-211ENST00000565922 FA2HQ7L5A8 372 aa12.54□□□□□ -0.4
CMTM3-211ENST00000565922 ERASQ7Z444 233 aa12.54□□□□□ -0.4
CMTM3-211ENST00000565922 GAGE2BQ13066 116 aa12.53□□□□□ -0.4
CMTM3-211ENST00000565922 FAM19A3Q7Z5A8 133 aa12.53□□□□□ -0.4
CMTM3-211ENST00000565922 SCGB3A1Q96QR1 104 aa12.53□□□□□ -0.4
CMTM3-211ENST00000565922 DMBT1Q9UGM3 2413 aaPredicted RBP12.52□□□□□ -0.4
CMTM3-211ENST00000565922 J3QL48 77 aa12.52□□□□□ -0.41
CMTM3-211ENST00000565922 HERVK_113P63121 156 aa12.52□□□□□ -0.41
CMTM3-211ENST00000565922 TRAPPC1Q9Y5R8 145 aa12.52□□□□□ -0.41
CMTM3-211ENST00000565922 MYCBP2O75592 4640 aa12.52□□□□□ -0.41
CMTM3-211ENST00000565922 KRTAP29-1A8MX34 341 aaPredicted RBP12.51□□□□□ -0.41
CMTM3-211ENST00000565922 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.51□□□□□ -0.41
CMTM3-211ENST00000565922 RPL18AQ02543 176 aaKnown RBP12.51□□□□□ -0.41
CMTM3-211ENST00000565922 ZC2HC1BQ5TFG8 222 aa12.51□□□□□ -0.41
CMTM3-211ENST00000565922 GEMIN7Q9H840 131 aaKnown RBP12.5□□□□□ -0.41
CMTM3-211ENST00000565922 OXTP01178 125 aa12.48□□□□□ -0.41
CMTM3-211ENST00000565922 PRSS2P07478 247 aa12.48□□□□□ -0.41
CMTM3-211ENST00000565922 PACRGQ96M98 296 aaPredicted RBP12.48□□□□□ -0.41
CMTM3-211ENST00000565922 TRBV30A0A0K0K1B3 111 aa12.47□□□□□ -0.41
CMTM3-211ENST00000565922 TLX1NBP0CAT3 122 aa12.47□□□□□ -0.41
CMTM3-211ENST00000565922 KIAA0087Q14695 138 aa12.47□□□□□ -0.41
CMTM3-211ENST00000565922 A0A0J9YXV3 536 aa12.46□□□□□ -0.41
CMTM3-211ENST00000565922 UNQ6190/PRO20217Q6UXQ8 127 aa12.46□□□□□ -0.41
CMTM3-211ENST00000565922 C18orf32Q8TCD1 76 aa12.45□□□□□ -0.42
CMTM3-211ENST00000565922 C6orf48Q9UBA6 75 aa12.45□□□□□ -0.42
CMTM3-211ENST00000565922 RAB5BP61020 215 aa12.44□□□□□ -0.42
CMTM3-211ENST00000565922 CKS1BP61024 79 aa12.44□□□□□ -0.42
CMTM3-211ENST00000565922 C10orf25Q5T742 122 aa12.44□□□□□ -0.42
CMTM3-211ENST00000565922 Q8IZM0 81 aa12.44□□□□□ -0.42
CMTM3-211ENST00000565922 TOMM7Q9P0U1 55 aa12.44□□□□□ -0.42
CMTM3-211ENST00000565922 CDKN2A-AS1Q9UH64 79 aa12.44□□□□□ -0.42
CMTM3-211ENST00000565922 TINCRA0A1B0GVN0 87 aa12.43□□□□□ -0.42
CMTM3-211ENST00000565922 LINC00614P0C842 121 aa12.43□□□□□ -0.42
CMTM3-211ENST00000565922 HNRNPA3P51991 378 aaKnown RBP12.43□□□□□ -0.42
CMTM3-211ENST00000565922 PRR3P79522 188 aaKnown RBP12.43□□□□□ -0.42
CMTM3-211ENST00000565922 PMVKQ15126 192 aa12.43□□□□□ -0.42
CMTM3-211ENST00000565922 C9orf116Q5BN46 136 aaPredicted RBP12.42□□□□□ -0.42
CMTM3-211ENST00000565922 C6orf226Q5I0X4 101 aa12.42□□□□□ -0.42
CMTM3-211ENST00000565922 LINC00469Q8N7U9 141 aa12.42□□□□□ -0.42
CMTM3-211ENST00000565922 C2orf82Q6UX34 121 aa12.41□□□□□ -0.42
CMTM3-211ENST00000565922 Q6ZRP5 223 aa12.41□□□□□ -0.42
CMTM3-211ENST00000565922 CST9LQ9H4G1 147 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms