RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 K7EP13 123 aa4.3□□□□□ -1.72
CHD9-217ENST00000565832 UBE2L6O14933 153 aa4.3□□□□□ -1.72
CHD9-217ENST00000565832 AMMECR1LQ6DCA0 310 aa4.3□□□□□ -1.72
CHD9-217ENST00000565832 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
CHD9-217ENST00000565832 A0A1B0GV90 55 aa4.29□□□□□ -1.72
CHD9-217ENST00000565832 E9PLD3 99 aa4.29□□□□□ -1.72
CHD9-217ENST00000565832 UBE2D1P51668 147 aa4.29□□□□□ -1.72
CHD9-217ENST00000565832 MRPS36P82909 103 aaKnown RBP4.29□□□□□ -1.72
CHD9-217ENST00000565832 LINC00242Q5T6M2 205 aa4.29□□□□□ -1.72
CHD9-217ENST00000565832 NFE4Q86UQ8 179 aa4.29□□□□□ -1.72
CHD9-217ENST00000565832 OR5A1Q8NGJ0 315 aa4.29□□□□□ -1.72
CHD9-217ENST00000565832 PLEKHB2Q96CS7 222 aa4.29□□□□□ -1.72
CHD9-217ENST00000565832 CDKN2A-AS1Q9UH64 79 aa4.29□□□□□ -1.72
CHD9-217ENST00000565832 TMEM223A0PJW6 202 aa4.29□□□□□ -1.72
CHD9-217ENST00000565832 SPINK8P0C7L1 97 aa4.29□□□□□ -1.72
CHD9-217ENST00000565832 CLPSL2Q6UWE3 100 aa4.29□□□□□ -1.72
CHD9-217ENST00000565832 MRPL52Q86TS9 123 aaKnown RBP4.29□□□□□ -1.72
CHD9-217ENST00000565832 MYMXA0A1B0GTQ4 84 aa4.28□□□□□ -1.72
CHD9-217ENST00000565832 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
CHD9-217ENST00000565832 BVES-AS1Q5T3Y7 98 aa4.28□□□□□ -1.72
CHD9-217ENST00000565832 KPRPQ5T749 579 aaPredicted RBP4.28□□□□□ -1.72
CHD9-217ENST00000565832 LINC00469Q8N7U9 141 aa4.28□□□□□ -1.72
CHD9-217ENST00000565832 TIMM21Q9BVV7 248 aa4.28□□□□□ -1.72
CHD9-217ENST00000565832 CSDC2Q9Y534 153 aaKnown RBP4.28□□□□□ -1.72
CHD9-217ENST00000565832 TINCRA0A1B0GVN0 87 aa4.27□□□□□ -1.73
CHD9-217ENST00000565832 ZNF815PA8K554 130 aa4.27□□□□□ -1.73
CHD9-217ENST00000565832 DLEU1O43261 78 aa4.27□□□□□ -1.73
CHD9-217ENST00000565832 C11orf45Q8TAV5 145 aa4.27□□□□□ -1.73
CHD9-217ENST00000565832 TMEM101Q96IK0 257 aa4.27□□□□□ -1.73
CHD9-217ENST00000565832 C2orf88Q9BSF0 95 aa4.27□□□□□ -1.73
CHD9-217ENST00000565832 GEMIN7Q9H840 131 aaKnown RBP4.27□□□□□ -1.73
CHD9-217ENST00000565832 J3QQQ9 107 aa4.27□□□□□ -1.73
CHD9-217ENST00000565832 IGHV3-30-3P0DP02 117 aa4.27□□□□□ -1.73
CHD9-217ENST00000565832 ZNF25P17030 456 aaPredicted RBP4.27□□□□□ -1.73
CHD9-217ENST00000565832 RBX1P62877 108 aa4.27□□□□□ -1.73
CHD9-217ENST00000565832 TMEM97Q5BJF2 176 aa4.27□□□□□ -1.73
CHD9-217ENST00000565832 TM2D3Q9BRN9 247 aa4.27□□□□□ -1.73
CHD9-217ENST00000565832 DEFB131BA0A096LNP1 70 aa4.26□□□□□ -1.73
CHD9-217ENST00000565832 MRPL23Q16540 153 aaKnown RBP4.26□□□□□ -1.73
CHD9-217ENST00000565832 LYPD5Q6UWN5 251 aa4.26□□□□□ -1.73
CHD9-217ENST00000565832 LINC00269Q8N2A0 174 aa4.26□□□□□ -1.73
CHD9-217ENST00000565832 IGLV10-54A0A075B6I4 117 aa4.26□□□□□ -1.73
CHD9-217ENST00000565832 NPSP0C0P6 89 aa4.26□□□□□ -1.73
CHD9-217ENST00000565832 SCGB1D4Q6XE38 83 aa4.26□□□□□ -1.73
CHD9-217ENST00000565832 C11orf68Q9H3H3 251 aaKnown RBP4.26□□□□□ -1.73
CHD9-217ENST00000565832 ICOSQ9Y6W8 199 aa4.26□□□□□ -1.73
CHD9-217ENST00000565832 H7C423 109 aa4.25□□□□□ -1.73
CHD9-217ENST00000565832 LEPROTO15243 131 aa4.25□□□□□ -1.73
CHD9-217ENST00000565832 SIVA1O15304 175 aa4.25□□□□□ -1.73
CHD9-217ENST00000565832 LGALS3P17931 250 aaKnown RBP4.25□□□□□ -1.73
CHD9-217ENST00000565832 XCL1P47992 114 aa4.25□□□□□ -1.73
CHD9-217ENST00000565832 FXYD2P54710 66 aa4.25□□□□□ -1.73
CHD9-217ENST00000565832 HERVK_113P61574 105 aa4.25□□□□□ -1.73
CHD9-217ENST00000565832 C10orf126Q8N4M7 172 aa4.25□□□□□ -1.73
CHD9-217ENST00000565832 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
CHD9-217ENST00000565832 IGHV1-58A0A0C4DH39 117 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 LINC00959A0A1B0GUT2 108 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 ANGP03950 147 aaKnown RBP4.24□□□□□ -1.73
CHD9-217ENST00000565832 ESRGQ1W209 222 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 COL5A1-AS1Q5SY13 56 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 C5orf38Q86SI9 138 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 ZNF625Q96I27 306 aaPredicted RBP4.24□□□□□ -1.73
CHD9-217ENST00000565832 HIST1H4GQ99525 98 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 NAA38Q9BRA0 125 aaKnown RBP4.24□□□□□ -1.73
CHD9-217ENST00000565832 FBN3Q75N90 2809 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 IGLV5-45A0A087WSX0 123 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 A0A1B0GUV1 79 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 K7ERJ3 54 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 IGHV3-30P01768 117 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 IGHV3-33P01772 117 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 IGHV3-30-5P0DP03 117 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 HERVK_113P63121 156 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 ADAMTSL4-AS1Q5T5F5 129 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 WFDC10BQ8IUB3 73 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 HIGD1BQ9P298 99 aa4.24□□□□□ -1.73
CHD9-217ENST00000565832 IGHV3OR16-9A0A0B4J2B5 98 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 A0A0U1RRA0 63 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 SMIM1B2RUZ4 78 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 PCP4P48539 62 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 HSD52Q0P140 79 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 FOXI1Q12951 378 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 LBHQ53QV2 105 aaPredicted RBP4.23□□□□□ -1.73
CHD9-217ENST00000565832 CEND1Q8N111 149 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 DAND5Q8N907 189 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 LINC00476Q8WZB0 136 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 RAB37Q96AX2 223 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 KLK12Q9UKR0 248 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 PLECQ15149 4684 aaKnown RBP4.23□□□□□ -1.73
CHD9-217ENST00000565832 A0A0J9YXY3 114 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 TEX48A0A1B0GUV7 120 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 TAX1BP3O14907 124 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 CCL25O15444 150 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 SRSF9Q13242 221 aaKnown RBP eCLIP4.23□□□□□ -1.73
CHD9-217ENST00000565832 LELP1Q5T871 98 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 FAM19A3Q7Z5A8 133 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 ORAOV1Q8WV07 137 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 NDUFA12Q9UI09 145 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 DNAH10Q8IVF4 4471 aa4.23□□□□□ -1.73
CHD9-217ENST00000565832 NPC2P61916 151 aa4.22□□□□□ -1.73
CHD9-217ENST00000565832 REG3AQ06141 175 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms