RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 SDIM1Q6ZPB5 146 aa7.02□□□□□ -1.29
CAPN3-215ENST00000565559 SLC7A5P1Q8MH63 180 aa7.02□□□□□ -1.29
CAPN3-215ENST00000565559 KIR2DL4Q99706 377 aa7.02□□□□□ -1.29
CAPN3-215ENST00000565559 GNB1LQ9BYB4 327 aa7.02□□□□□ -1.29
CAPN3-215ENST00000565559 PRR34Q9NV39 138 aa7.02□□□□□ -1.29
CAPN3-215ENST00000565559 USP17L23D6RBM5 183 aa7.01□□□□□ -1.29
CAPN3-215ENST00000565559 FCER1GP30273 86 aa7.01□□□□□ -1.29
CAPN3-215ENST00000565559 CIRBPQ14011 172 aaKnown RBP7.01□□□□□ -1.29
CAPN3-215ENST00000565559 SMIM2Q9BVW6 85 aa7.01□□□□□ -1.29
CAPN3-215ENST00000565559 A0A087WYN8 130 aa7□□□□□ -1.29
CAPN3-215ENST00000565559 CRPP02741 224 aa7□□□□□ -1.29
CAPN3-215ENST00000565559 MT-ND6P03923 174 aa7□□□□□ -1.29
CAPN3-215ENST00000565559 PRSS1P07477 247 aa7□□□□□ -1.29
CAPN3-215ENST00000565559 ZNF25P17030 456 aaPredicted RBP7□□□□□ -1.29
CAPN3-215ENST00000565559 MIAQ16674 131 aa7□□□□□ -1.29
CAPN3-215ENST00000565559 SPINK6Q6UWN8 80 aa7□□□□□ -1.29
CAPN3-215ENST00000565559 ENHOQ6UWT2 76 aa7□□□□□ -1.29
CAPN3-215ENST00000565559 C20orf203Q8NBC4 194 aa7□□□□□ -1.29
CAPN3-215ENST00000565559 IGLV4-60A0A075B6I1 120 aa6.99□□□□□ -1.29
CAPN3-215ENST00000565559 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-215ENST00000565559 IGKV2-29A2NJV5 120 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-215ENST00000565559 B5MCH6 92 aa6.99□□□□□ -1.29
CAPN3-215ENST00000565559 FGF6P10767 208 aa6.99□□□□□ -1.29
CAPN3-215ENST00000565559 PRR3P79522 188 aaKnown RBP6.99□□□□□ -1.29
CAPN3-215ENST00000565559 SMAGPQ0VAQ4 97 aa6.99□□□□□ -1.29
CAPN3-215ENST00000565559 AMMECR1LQ6DCA0 310 aa6.99□□□□□ -1.29
CAPN3-215ENST00000565559 MRPL52Q86TS9 123 aaKnown RBP6.99□□□□□ -1.29
CAPN3-215ENST00000565559 LINC00269Q8N2A0 174 aa6.99□□□□□ -1.29
CAPN3-215ENST00000565559 TRAV8-4A0A0B4J246 113 aa6.98□□□□□ -1.29
CAPN3-215ENST00000565559 REG3AQ06141 175 aa6.98□□□□□ -1.29
CAPN3-215ENST00000565559 RNASEKQ6P5S7 137 aaKnown RBP6.98□□□□□ -1.29
CAPN3-215ENST00000565559 TMEM18Q96B42 140 aa6.98□□□□□ -1.29
CAPN3-215ENST00000565559 MAP1LC3AQ9H492 121 aa6.98□□□□□ -1.29
CAPN3-215ENST00000565559 CRCT1Q9UGL9 99 aa6.98□□□□□ -1.29
CAPN3-215ENST00000565559 K7EMI3 77 aa6.97□□□□□ -1.29
CAPN3-215ENST00000565559 RAB5AP20339 215 aa6.97□□□□□ -1.29
CAPN3-215ENST00000565559 Q8N8P6 123 aa6.97□□□□□ -1.29
CAPN3-215ENST00000565559 TMEM101Q96IK0 257 aa6.97□□□□□ -1.29
CAPN3-215ENST00000565559 TIMM21Q9BVV7 248 aa6.97□□□□□ -1.29
CAPN3-215ENST00000565559 CSDC2Q9Y534 153 aaKnown RBP6.97□□□□□ -1.29
CAPN3-215ENST00000565559 IGHV3-64A0A075B6Q5 118 aa6.96□□□□□ -1.3
CAPN3-215ENST00000565559 TGIF2-C20orf24A0A0A6YYL0 155 aa6.96□□□□□ -1.3
CAPN3-215ENST00000565559 KIAA1644Q3SXP7 199 aa6.96□□□□□ -1.3
CAPN3-215ENST00000565559 OR5A1Q8NGJ0 315 aa6.96□□□□□ -1.3
CAPN3-215ENST00000565559 SPACA4Q8TDM5 124 aa6.96□□□□□ -1.3
CAPN3-215ENST00000565559 NXT2Q9NPJ8 142 aaKnown RBP6.96□□□□□ -1.3
CAPN3-215ENST00000565559 LOC389332A0A1B0GUA5 103 aa6.95□□□□□ -1.3
CAPN3-215ENST00000565559 CHTF8P0CG12 524 aa6.95□□□□□ -1.3
CAPN3-215ENST00000565559 FABP9Q0Z7S8 132 aa6.95□□□□□ -1.3
CAPN3-215ENST00000565559 KRTAP26-1Q6PEX3 210 aa6.95□□□□□ -1.3
CAPN3-215ENST00000565559 YPEL4Q96NS1 127 aa6.95□□□□□ -1.3
CAPN3-215ENST00000565559 ALKBH7Q9BT30 221 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-215ENST00000565559 SMCO4Q9NRQ5 59 aa6.95□□□□□ -1.3
CAPN3-215ENST00000565559 CDC42SE2Q9NRR3 84 aa6.95□□□□□ -1.3
CAPN3-215ENST00000565559 PLAC8Q9NZF1 115 aa6.95□□□□□ -1.3
CAPN3-215ENST00000565559 UBE2D4Q9Y2X8 147 aa6.95□□□□□ -1.3
CAPN3-215ENST00000565559 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-215ENST00000565559 CLPSL2Q6UWE3 100 aa6.94□□□□□ -1.3
CAPN3-215ENST00000565559 ZNF664Q8N3J9 261 aa6.94□□□□□ -1.3
CAPN3-215ENST00000565559 TRAPPC1Q9Y5R8 145 aa6.94□□□□□ -1.3
CAPN3-215ENST00000565559 G0S2P27469 103 aa6.93□□□□□ -1.3
CAPN3-215ENST00000565559 CNBPP62633 177 aaKnown RBP6.93□□□□□ -1.3
CAPN3-215ENST00000565559 ORMDL2Q53FV1 153 aa6.93□□□□□ -1.3
CAPN3-215ENST00000565559 SPANXA1Q9NS26 97 aa6.93□□□□□ -1.3
CAPN3-215ENST00000565559 IGLV10-54A0A075B6I4 117 aa6.92□□□□□ -1.3
CAPN3-215ENST00000565559 CCL25O15444 150 aa6.92□□□□□ -1.3
CAPN3-215ENST00000565559 IFI27P40305 119 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-215ENST00000565559 RPL39P62891 51 aaKnown RBP6.92□□□□□ -1.3
CAPN3-215ENST00000565559 MRPS36P82909 103 aaKnown RBP6.92□□□□□ -1.3
CAPN3-215ENST00000565559 CBLN2Q8IUK8 224 aa6.92□□□□□ -1.3
CAPN3-215ENST00000565559 PRSS3P2Q8NHM4 247 aa6.92□□□□□ -1.3
CAPN3-215ENST00000565559 PYGO1Q9Y3Y4 419 aa6.92□□□□□ -1.3
CAPN3-215ENST00000565559 LINC00959A0A1B0GUT2 108 aa6.91□□□□□ -1.3
CAPN3-215ENST00000565559 hDV102S1A0JD36 115 aa6.91□□□□□ -1.3
CAPN3-215ENST00000565559 LINC01546A6NGU7 62 aa6.91□□□□□ -1.3
CAPN3-215ENST00000565559 PRR4Q16378 134 aa6.91□□□□□ -1.3
CAPN3-215ENST00000565559 CHCHD10Q8WYQ3 142 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-215ENST00000565559 CYSLTR1Q9Y271 337 aa6.91□□□□□ -1.3
CAPN3-215ENST00000565559 IGKV3OR2-268A0A0C4DH90 116 aa6.9□□□□□ -1.3
CAPN3-215ENST00000565559 LINC01549A6NIU2 74 aa6.9□□□□□ -1.3
CAPN3-215ENST00000565559 NPSP0C0P6 89 aa6.9□□□□□ -1.3
CAPN3-215ENST00000565559 SS18Q15532 418 aa6.9□□□□□ -1.3
CAPN3-215ENST00000565559 C2orf66Q6UXQ4 117 aa6.9□□□□□ -1.3
CAPN3-215ENST00000565559 FAM104AQ969W3 186 aa6.9□□□□□ -1.3
CAPN3-215ENST00000565559 GAGE12HA6NDE8 117 aa6.89□□□□□ -1.31
CAPN3-215ENST00000565559 C1orf196B1AJZ1 125 aa6.89□□□□□ -1.31
CAPN3-215ENST00000565559 Q6ZUT4 128 aa6.89□□□□□ -1.31
CAPN3-215ENST00000565559 C18orf32Q8TCD1 76 aa6.89□□□□□ -1.31
CAPN3-215ENST00000565559 PSORS1C2Q9UIG4 136 aa6.89□□□□□ -1.31
CAPN3-215ENST00000565559 SRSF9Q13242 221 aaKnown RBP eCLIP6.88□□□□□ -1.31
CAPN3-215ENST00000565559 MAJINQ3KP22 176 aa6.88□□□□□ -1.31
CAPN3-215ENST00000565559 CD164L2Q6UWJ8 174 aa6.88□□□□□ -1.31
CAPN3-215ENST00000565559 FA2HQ7L5A8 372 aa6.88□□□□□ -1.31
CAPN3-215ENST00000565559 IGIPA6NJ69 53 aa6.87□□□□□ -1.31
CAPN3-215ENST00000565559 RNASE13Q5GAN3 156 aaKnown RBP6.87□□□□□ -1.31
CAPN3-215ENST00000565559 CFAP161Q6P656 301 aa6.87□□□□□ -1.31
CAPN3-215ENST00000565559 Q6ZRP5 223 aa6.87□□□□□ -1.31
CAPN3-215ENST00000565559 STPG4Q8N801 248 aa6.87□□□□□ -1.31
CAPN3-215ENST00000565559 TOMM6Q96B49 74 aa6.87□□□□□ -1.31
CAPN3-215ENST00000565559 TMEM141Q96I45 108 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms