RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 LINC00528Q8N1L1 170 aa9.87□□□□□ -0.83
COMMD4-212ENST00000565517 PRSS3P2Q8NHM4 247 aa9.87□□□□□ -0.83
COMMD4-212ENST00000565517 FAT1Q14517 4588 aa9.87□□□□□ -0.83
COMMD4-212ENST00000565517 VPS13BQ7Z7G8 4022 aa9.87□□□□□ -0.83
COMMD4-212ENST00000565517 LINC01546A6NGU7 62 aa9.86□□□□□ -0.83
COMMD4-212ENST00000565517 IGIPA6NJ69 53 aa9.86□□□□□ -0.83
COMMD4-212ENST00000565517 PANO1I0J062 215 aa9.86□□□□□ -0.83
COMMD4-212ENST00000565517 PLA2G1BP04054 148 aaKnown RBP9.86□□□□□ -0.83
COMMD4-212ENST00000565517 Q6ZN92 141 aa9.86□□□□□ -0.83
COMMD4-212ENST00000565517 PKIGQ9Y2B9 76 aa9.86□□□□□ -0.83
COMMD4-212ENST00000565517 TGIF2-C20orf24A0A0A6YYL0 155 aa9.85□□□□□ -0.83
COMMD4-212ENST00000565517 LINC01549A6NIU2 74 aa9.85□□□□□ -0.83
COMMD4-212ENST00000565517 INAFM2P0DMQ5 153 aa9.85□□□□□ -0.83
COMMD4-212ENST00000565517 COX6A2Q02221 97 aa9.85□□□□□ -0.83
COMMD4-212ENST00000565517 SYCNQ0VAF6 134 aa9.85□□□□□ -0.83
COMMD4-212ENST00000565517 TOMM6Q96B49 74 aa9.85□□□□□ -0.83
COMMD4-212ENST00000565517 LINC00526Q96FQ7 95 aa9.85□□□□□ -0.83
COMMD4-212ENST00000565517 CARD19Q96LW7 228 aa9.85□□□□□ -0.83
COMMD4-212ENST00000565517 AMELXQ99217 191 aa9.85□□□□□ -0.83
COMMD4-212ENST00000565517 C2orf88Q9BSF0 95 aa9.85□□□□□ -0.83
COMMD4-212ENST00000565517 VCX2Q9H322 139 aa9.85□□□□□ -0.83
COMMD4-212ENST00000565517 ABCA13Q86UQ4 5058 aa9.84□□□□□ -0.83
COMMD4-212ENST00000565517 IGLV4-69A0A075B6H9 119 aa9.84□□□□□ -0.83
COMMD4-212ENST00000565517 PAPPA-AS1Q5QFB9 102 aa9.84□□□□□ -0.83
COMMD4-212ENST00000565517 LINC00242Q5T6M2 205 aa9.84□□□□□ -0.83
COMMD4-212ENST00000565517 OR10D4PQ8NGN7 298 aa9.84□□□□□ -0.83
COMMD4-212ENST00000565517 SPACA4Q8TDM5 124 aa9.84□□□□□ -0.83
COMMD4-212ENST00000565517 C2orf48Q96LS8 159 aa9.84□□□□□ -0.83
COMMD4-212ENST00000565517 TIMM17AQ99595 171 aa9.84□□□□□ -0.83
COMMD4-212ENST00000565517 SRRM2Q9UQ35 2752 aaKnown RBP9.84□□□□□ -0.83
COMMD4-212ENST00000565517 UBE2D1P51668 147 aa9.83□□□□□ -0.84
COMMD4-212ENST00000565517 LINC00173Q6ZV60 143 aa9.83□□□□□ -0.84
COMMD4-212ENST00000565517 TRAPPC1Q9Y5R8 145 aa9.83□□□□□ -0.84
COMMD4-212ENST00000565517 A0A087WZ39 114 aa9.82□□□□□ -0.84
COMMD4-212ENST00000565517 F8WDY8 70 aa9.82□□□□□ -0.84
COMMD4-212ENST00000565517 ERASQ7Z444 233 aa9.82□□□□□ -0.84
COMMD4-212ENST00000565517 FAM19A3Q7Z5A8 133 aa9.82□□□□□ -0.84
COMMD4-212ENST00000565517 DPH3Q96FX2 82 aa9.82□□□□□ -0.84
COMMD4-212ENST00000565517 A0A087WYN8 130 aa9.81□□□□□ -0.84
COMMD4-212ENST00000565517 CHTF8P0CG12 524 aa9.81□□□□□ -0.84
COMMD4-212ENST00000565517 SPAG11BQ08648 103 aa9.81□□□□□ -0.84
COMMD4-212ENST00000565517 FA2HQ7L5A8 372 aa9.81□□□□□ -0.84
COMMD4-212ENST00000565517 LINC01561Q8N1V8 128 aa9.81□□□□□ -0.84
COMMD4-212ENST00000565517 CAMK2N2Q96S95 79 aa9.81□□□□□ -0.84
COMMD4-212ENST00000565517 LINC00474Q9P2X8 69 aa9.81□□□□□ -0.84
COMMD4-212ENST00000565517 ZC2HC1BQ5TFG8 222 aa9.8□□□□□ -0.84
COMMD4-212ENST00000565517 Q6ZRU5 148 aa9.8□□□□□ -0.84
COMMD4-212ENST00000565517 ORAOV1Q8WV07 137 aa9.8□□□□□ -0.84
COMMD4-212ENST00000565517 YPEL4Q96NS1 127 aa9.8□□□□□ -0.84
COMMD4-212ENST00000565517 SCGB3A1Q96QR1 104 aa9.8□□□□□ -0.84
COMMD4-212ENST00000565517 SMCO4Q9NRQ5 59 aa9.8□□□□□ -0.84
COMMD4-212ENST00000565517 PLAC8Q9NZF1 115 aa9.8□□□□□ -0.84
COMMD4-212ENST00000565517 SEC11AP67812 179 aa9.79□□□□□ -0.84
COMMD4-212ENST00000565517 RNF151Q2KHN1 245 aa9.79□□□□□ -0.84
COMMD4-212ENST00000565517 A0A096LNI7 61 aa9.78□□□□□ -0.84
COMMD4-212ENST00000565517 KRTAP10-4P60372 401 aaPredicted RBP9.78□□□□□ -0.84
COMMD4-212ENST00000565517 MAJINQ3KP22 176 aa9.78□□□□□ -0.84
COMMD4-212ENST00000565517 C18orf32Q8TCD1 76 aa9.78□□□□□ -0.84
COMMD4-212ENST00000565517 IGKV2-24A0A0C4DH68 120 aa9.77□□□□□ -0.85
COMMD4-212ENST00000565517 LOC107984640A0A0U1RRK4 108 aa9.77□□□□□ -0.85
COMMD4-212ENST00000565517 MRPL35Q9NZE8 188 aaKnown RBP9.77□□□□□ -0.85
COMMD4-212ENST00000565517 LINC00614P0C842 121 aa9.76□□□□□ -0.85
COMMD4-212ENST00000565517 HERVK_113P63121 156 aa9.76□□□□□ -0.85
COMMD4-212ENST00000565517 KIAA0087Q14695 138 aa9.76□□□□□ -0.85
COMMD4-212ENST00000565517 SLC7A5P1Q8MH63 180 aa9.76□□□□□ -0.85
COMMD4-212ENST00000565517 NDUFA1O15239 70 aa9.75□□□□□ -0.85
COMMD4-212ENST00000565517 PTTG1IPP53801 180 aa9.75□□□□□ -0.85
COMMD4-212ENST00000565517 RAB5BP61020 215 aa9.75□□□□□ -0.85
COMMD4-212ENST00000565517 RPL37AP61513 92 aaKnown RBP9.75□□□□□ -0.85
COMMD4-212ENST00000565517 STPG4Q8N801 248 aa9.75□□□□□ -0.85
COMMD4-212ENST00000565517 URB1-AS1Q96HZ7 61 aa9.75□□□□□ -0.85
COMMD4-212ENST00000565517 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.74□□□□□ -0.85
COMMD4-212ENST00000565517 GEMIN7Q9H840 131 aaKnown RBP9.74□□□□□ -0.85
COMMD4-212ENST00000565517 CST9LQ9H4G1 147 aa9.73□□□□□ -0.85
COMMD4-212ENST00000565517 FLG2Q5D862 2391 aaPredicted RBP9.73□□□□□ -0.85
COMMD4-212ENST00000565517 A0A096LNJ9 63 aa9.72□□□□□ -0.85
COMMD4-212ENST00000565517 TINCRA0A1B0GVN0 87 aa9.72□□□□□ -0.85
COMMD4-212ENST00000565517 GAGE2BQ13066 116 aa9.72□□□□□ -0.85
COMMD4-212ENST00000565517 PMVKQ15126 192 aa9.72□□□□□ -0.85
COMMD4-212ENST00000565517 UNQ6190/PRO20217Q6UXQ8 127 aa9.72□□□□□ -0.85
COMMD4-212ENST00000565517 CBLN2Q8IUK8 224 aa9.72□□□□□ -0.85
COMMD4-212ENST00000565517 CDKN2A-AS1Q9UH64 79 aa9.72□□□□□ -0.85
COMMD4-212ENST00000565517 A0A0J9YXV3 536 aa9.71□□□□□ -0.86
COMMD4-212ENST00000565517 TLX1NBP0CAT3 122 aa9.71□□□□□ -0.86
COMMD4-212ENST00000565517 C10orf25Q5T742 122 aa9.71□□□□□ -0.86
COMMD4-212ENST00000565517 C7orf33Q8WU49 177 aa9.71□□□□□ -0.86
COMMD4-212ENST00000565517 IGLV5-45A0A087WSX0 123 aa9.7□□□□□ -0.86
COMMD4-212ENST00000565517 TRBV30A0A0K0K1B3 111 aa9.7□□□□□ -0.86
COMMD4-212ENST00000565517 HBDP02042 147 aa9.7□□□□□ -0.86
COMMD4-212ENST00000565517 Q8IZM0 81 aa9.7□□□□□ -0.86
COMMD4-212ENST00000565517 C6orf48Q9UBA6 75 aa9.7□□□□□ -0.86
COMMD4-212ENST00000565517 PRSS2P07478 247 aa9.69□□□□□ -0.86
COMMD4-212ENST00000565517 RPL18AQ02543 176 aaKnown RBP9.69□□□□□ -0.86
COMMD4-212ENST00000565517 PACRGQ96M98 296 aaPredicted RBP9.69□□□□□ -0.86
COMMD4-212ENST00000565517 PDZD11Q5EBL8 140 aa9.68□□□□□ -0.86
COMMD4-212ENST00000565517 C6orf226Q5I0X4 101 aa9.68□□□□□ -0.86
COMMD4-212ENST00000565517 C2orf82Q6UX34 121 aa9.68□□□□□ -0.86
COMMD4-212ENST00000565517 LINC00469Q8N7U9 141 aa9.68□□□□□ -0.86
COMMD4-212ENST00000565517 CHCHD1Q96BP2 118 aaKnown RBP9.68□□□□□ -0.86
COMMD4-212ENST00000565517 ATP5LO75964 103 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms