RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 Q6ZRP5 223 aa14.64□□□□□ -0.07
RAB40C-209ENST00000565511 KRTAP10-8P60410 259 aa14.63□□□□□ -0.07
RAB40C-209ENST00000565511 RPL18AQ02543 176 aaKnown RBP14.63□□□□□ -0.07
RAB40C-209ENST00000565511 C9orf116Q5BN46 136 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-209ENST00000565511 TMEM18Q96B42 140 aa14.63□□□□□ -0.07
RAB40C-209ENST00000565511 IGHV3OR16-9A0A0B4J2B5 98 aa14.61□□□□□ -0.07
RAB40C-209ENST00000565511 C10orf25Q5T742 122 aa14.61□□□□□ -0.07
RAB40C-209ENST00000565511 ORAOV1Q8WV07 137 aa14.61□□□□□ -0.07
RAB40C-209ENST00000565511 SPANXA1Q9NS26 97 aa14.61□□□□□ -0.07
RAB40C-209ENST00000565511 PHF5AQ7RTV0 110 aaKnown RBP14.6□□□□□ -0.07
RAB40C-209ENST00000565511 MRPS36P82909 103 aaKnown RBP14.59□□□□□ -0.07
RAB40C-209ENST00000565511 OR10D4PQ8NGN7 298 aa14.59□□□□□ -0.07
RAB40C-209ENST00000565511 PSORS1C2Q9UIG4 136 aa14.59□□□□□ -0.07
RAB40C-209ENST00000565511 F8W036 122 aa14.58□□□□□ -0.08
RAB40C-209ENST00000565511 SMDT1Q9H4I9 107 aa14.58□□□□□ -0.08
RAB40C-209ENST00000565511 IFITM10A6NMD0 228 aa14.57□□□□□ -0.08
RAB40C-209ENST00000565511 RNF151Q2KHN1 245 aa14.57□□□□□ -0.08
RAB40C-209ENST00000565511 REG3GQ6UW15 175 aa14.57□□□□□ -0.08
RAB40C-209ENST00000565511 S100A8P05109 93 aa14.56□□□□□ -0.08
RAB40C-209ENST00000565511 KRTAP11-1Q8IUC1 163 aa14.56□□□□□ -0.08
RAB40C-209ENST00000565511 FAM168BA1KXE4 195 aa14.55□□□□□ -0.08
RAB40C-209ENST00000565511 UNQ6190/PRO20217Q6UXQ8 127 aa14.55□□□□□ -0.08
RAB40C-209ENST00000565511 MRPL35Q9NZE8 188 aaKnown RBP14.55□□□□□ -0.08
RAB40C-209ENST00000565511 C6orf48Q9UBA6 75 aa14.55□□□□□ -0.08
RAB40C-209ENST00000565511 PPBPP02775 128 aa14.54□□□□□ -0.08
RAB40C-209ENST00000565511 ORMDL3Q8N138 153 aa14.54□□□□□ -0.08
RAB40C-209ENST00000565511 PRELID3AQ96N28 172 aa14.54□□□□□ -0.08
RAB40C-209ENST00000565511 IGLV4-3A0A075B6K6 122 aa14.53□□□□□ -0.08
RAB40C-209ENST00000565511 TMEM136Q6ZRR5 245 aa14.53□□□□□ -0.08
RAB40C-209ENST00000565511 KIAA0087Q14695 138 aa14.52□□□□□ -0.09
RAB40C-209ENST00000565511 ATP5L2Q7Z4Y8 100 aa14.52□□□□□ -0.09
RAB40C-209ENST00000565511 RNF213Q63HN8 5207 aa14.52□□□□□ -0.09
RAB40C-209ENST00000565511 NDUFA1O15239 70 aa14.51□□□□□ -0.09
RAB40C-209ENST00000565511 MT-ND6P03923 174 aa14.51□□□□□ -0.09
RAB40C-209ENST00000565511 LINC00242Q5T6M2 205 aa14.51□□□□□ -0.09
RAB40C-209ENST00000565511 ZC2HC1BQ5TFG8 222 aa14.51□□□□□ -0.09
RAB40C-209ENST00000565511 KRTAP7-1Q8IUC3 87 aa14.51□□□□□ -0.09
RAB40C-209ENST00000565511 C1orf137Q5JT78 98 aa14.5□□□□□ -0.09
RAB40C-209ENST00000565511 LOC389332A0A1B0GUA5 103 aa14.49□□□□□ -0.09
RAB40C-209ENST00000565511 PYGO1Q9Y3Y4 419 aa14.49□□□□□ -0.09
RAB40C-209ENST00000565511 A0A087WZ39 114 aa14.48□□□□□ -0.09
RAB40C-209ENST00000565511 TLX1NBP0CAT3 122 aa14.48□□□□□ -0.09
RAB40C-209ENST00000565511 IFI27P40305 119 aaPredicted RBP14.48□□□□□ -0.09
RAB40C-209ENST00000565511 TGIF2-C20orf24A0A0A6YYL0 155 aa14.47□□□□□ -0.09
RAB40C-209ENST00000565511 F8WDY8 70 aa14.47□□□□□ -0.09
RAB40C-209ENST00000565511 RAB5AP20339 215 aa14.47□□□□□ -0.09
RAB40C-209ENST00000565511 LINC00173Q6ZV60 143 aa14.47□□□□□ -0.09
RAB40C-209ENST00000565511 FAM19A5Q7Z5A7 132 aaPredicted RBP14.47□□□□□ -0.09
RAB40C-209ENST00000565511 PRSS47A8MTI9 375 aa14.46□□□□□ -0.09
RAB40C-209ENST00000565511 GAGE2EQ4V326 116 aa14.46□□□□□ -0.09
RAB40C-209ENST00000565511 C2orf82Q6UX34 121 aa14.46□□□□□ -0.09
RAB40C-209ENST00000565511 IMMP2LQ96T52 175 aa14.46□□□□□ -0.09
RAB40C-209ENST00000565511 GAGE2DQ9UEU5 116 aa14.46□□□□□ -0.09
RAB40C-209ENST00000565511 UBE2D1P51668 147 aa14.45□□□□□ -0.1
RAB40C-209ENST00000565511 TMEM141Q96I45 108 aa14.45□□□□□ -0.1
RAB40C-209ENST00000565511 IGLV7-43P04211 117 aa14.43□□□□□ -0.1
RAB40C-209ENST00000565511 MAP1LC3AQ9H492 121 aa14.43□□□□□ -0.1
RAB40C-209ENST00000565511 Q8N8P6 123 aa14.42□□□□□ -0.1
RAB40C-209ENST00000565511 C2orf66Q6UXQ4 117 aa14.41□□□□□ -0.1
RAB40C-209ENST00000565511 LAMTOR2Q9Y2Q5 125 aa14.41□□□□□ -0.1
RAB40C-209ENST00000565511 C9orf129Q5T035 196 aaKnown RBP14.4□□□□□ -0.1
RAB40C-209ENST00000565511 TEX43Q6ZNM6 134 aa14.4□□□□□ -0.1
RAB40C-209ENST00000565511 AMELXQ99217 191 aa14.4□□□□□ -0.1
RAB40C-209ENST00000565511 LPAP08519 4548 aa14.39□□□□□ -0.11
RAB40C-209ENST00000565511 CYSLTR1Q9Y271 337 aa14.39□□□□□ -0.11
RAB40C-209ENST00000565511 PNRC1Q12796 327 aaPredicted RBP14.38□□□□□ -0.11
RAB40C-209ENST00000565511 PRR26Q8N8Z3 221 aa14.38□□□□□ -0.11
RAB40C-209ENST00000565511 TRBV30A0A0K0K1B3 111 aa14.37□□□□□ -0.11
RAB40C-209ENST00000565511 M0QXV9 152 aa14.37□□□□□ -0.11
RAB40C-209ENST00000565511 MT-ND4LP03901 98 aa14.37□□□□□ -0.11
RAB40C-209ENST00000565511 ANAPC16Q96DE5 110 aa14.37□□□□□ -0.11
RAB40C-209ENST00000565511 IGIPA6NJ69 53 aa14.36□□□□□ -0.11
RAB40C-209ENST00000565511 NDUFC2-KCTD14E9PQ53 114 aa14.35□□□□□ -0.11
RAB40C-209ENST00000565511 H0Y9J4 135 aa14.35□□□□□ -0.11
RAB40C-209ENST00000565511 LINC01561Q8N1V8 128 aa14.35□□□□□ -0.11
RAB40C-209ENST00000565511 C2orf88Q9BSF0 95 aa14.35□□□□□ -0.11
RAB40C-209ENST00000565511 DIRC1Q969H9 104 aa14.34□□□□□ -0.11
RAB40C-209ENST00000565511 KRTAP1-4P0C5Y4 121 aa14.33□□□□□ -0.12
RAB40C-209ENST00000565511 ORMDL2Q53FV1 153 aa14.32□□□□□ -0.12
RAB40C-209ENST00000565511 Q6ZN92 141 aa14.32□□□□□ -0.12
RAB40C-209ENST00000565511 FAM19A3Q7Z5A8 133 aa14.32□□□□□ -0.12
RAB40C-209ENST00000565511 VCX2Q9H322 139 aa14.32□□□□□ -0.12
RAB40C-209ENST00000565511 TOMM7Q9P0U1 55 aa14.32□□□□□ -0.12
RAB40C-209ENST00000565511 ADCYAP1P18509 176 aa14.31□□□□□ -0.12
RAB40C-209ENST00000565511 KIAA1644Q3SXP7 199 aa14.31□□□□□ -0.12
RAB40C-209ENST00000565511 LINC00469Q8N7U9 141 aa14.31□□□□□ -0.12
RAB40C-209ENST00000565511 PACRGQ96M98 296 aaPredicted RBP14.31□□□□□ -0.12
RAB40C-209ENST00000565511 UBE2BP63146 152 aa14.3□□□□□ -0.12
RAB40C-209ENST00000565511 CDKN2A-AS1Q9UH64 79 aa14.29□□□□□ -0.12
RAB40C-209ENST00000565511 CTDSP1Q9GZU7 261 aa14.28□□□□□ -0.12
RAB40C-209ENST00000565511 NXT2Q9NPJ8 142 aaKnown RBP14.28□□□□□ -0.12
RAB40C-209ENST00000565511 NPSP0C0P6 89 aa14.27□□□□□ -0.13
RAB40C-209ENST00000565511 Q8IZM0 81 aa14.27□□□□□ -0.13
RAB40C-209ENST00000565511 K7EMI3 77 aa14.26□□□□□ -0.13
RAB40C-209ENST00000565511 PRSS2P07478 247 aa14.26□□□□□ -0.13
RAB40C-209ENST00000565511 RAB14P61106 215 aa14.26□□□□□ -0.13
RAB40C-209ENST00000565511 XAGE1AQ9HD64 81 aa14.26□□□□□ -0.13
RAB40C-209ENST00000565511 TOMM6Q96B49 74 aa14.25□□□□□ -0.13
RAB40C-209ENST00000565511 ALKBH7Q9BT30 221 aaPredicted RBP14.25□□□□□ -0.13
RAB40C-209ENST00000565511 CKS1BP61024 79 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms