RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 NRACQ8N912 160 aa5.29□□□□□ -1.56
CAPN3-213ENST00000565173 PKIGQ9Y2B9 76 aa5.29□□□□□ -1.56
CAPN3-213ENST00000565173 UBE2D4Q9Y2X8 147 aa5.29□□□□□ -1.56
CAPN3-213ENST00000565173 C1orf196B1AJZ1 125 aa5.28□□□□□ -1.56
CAPN3-213ENST00000565173 PPBPP02775 128 aa5.28□□□□□ -1.56
CAPN3-213ENST00000565173 SUMO2P61956 95 aaKnown RBP5.28□□□□□ -1.56
CAPN3-213ENST00000565173 GAGE2BQ13066 116 aa5.28□□□□□ -1.56
CAPN3-213ENST00000565173 RNASE13Q5GAN3 156 aaKnown RBP5.28□□□□□ -1.56
CAPN3-213ENST00000565173 REG3GQ6UW15 175 aa5.28□□□□□ -1.56
CAPN3-213ENST00000565173 TMEM136Q6ZRR5 245 aa5.28□□□□□ -1.56
CAPN3-213ENST00000565173 ORMDL3Q8N138 153 aa5.28□□□□□ -1.56
CAPN3-213ENST00000565173 TGIF2-C20orf24A0A0A6YYL0 155 aa5.27□□□□□ -1.57
CAPN3-213ENST00000565173 LOC107984640A0A0U1RRK4 108 aa5.27□□□□□ -1.57
CAPN3-213ENST00000565173 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.27□□□□□ -1.57
CAPN3-213ENST00000565173 COX7A2LO14548 114 aa5.27□□□□□ -1.57
CAPN3-213ENST00000565173 TNFRSF6BO95407 300 aa5.27□□□□□ -1.57
CAPN3-213ENST00000565173 APOMO95445 188 aa5.27□□□□□ -1.57
CAPN3-213ENST00000565173 NPYP01303 97 aa5.27□□□□□ -1.57
CAPN3-213ENST00000565173 FAM104AQ969W3 186 aa5.27□□□□□ -1.57
CAPN3-213ENST00000565173 PRELID3AQ96N28 172 aa5.27□□□□□ -1.57
CAPN3-213ENST00000565173 C20orf78Q9BR46 151 aa5.27□□□□□ -1.57
CAPN3-213ENST00000565173 TRBV24-1A0A075B6N3 115 aa5.26□□□□□ -1.57
CAPN3-213ENST00000565173 TRAV13-1A0A0B4J241 112 aa5.26□□□□□ -1.57
CAPN3-213ENST00000565173 FCER1GP30273 86 aa5.26□□□□□ -1.57
CAPN3-213ENST00000565173 KIAA1644Q3SXP7 199 aa5.26□□□□□ -1.57
CAPN3-213ENST00000565173 COX19Q49B96 90 aa5.26□□□□□ -1.57
CAPN3-213ENST00000565173 C9orf116Q5BN46 136 aaPredicted RBP5.26□□□□□ -1.57
CAPN3-213ENST00000565173 C5orf38Q86SI9 138 aa5.26□□□□□ -1.57
CAPN3-213ENST00000565173 CBLN2Q8IUK8 224 aa5.26□□□□□ -1.57
CAPN3-213ENST00000565173 C2orf48Q96LS8 159 aa5.26□□□□□ -1.57
CAPN3-213ENST00000565173 KIR2DL4Q99706 377 aa5.26□□□□□ -1.57
CAPN3-213ENST00000565173 TIMM21Q9BVV7 248 aa5.26□□□□□ -1.57
CAPN3-213ENST00000565173 GNB1LQ9BYB4 327 aa5.26□□□□□ -1.57
CAPN3-213ENST00000565173 PSORS1C2Q9UIG4 136 aa5.26□□□□□ -1.57
CAPN3-213ENST00000565173 LOC389332A0A1B0GUA5 103 aa5.25□□□□□ -1.57
CAPN3-213ENST00000565173 MT-ND6P03923 174 aa5.25□□□□□ -1.57
CAPN3-213ENST00000565173 MALP21145 153 aa5.25□□□□□ -1.57
CAPN3-213ENST00000565173 FABP9Q0Z7S8 132 aa5.25□□□□□ -1.57
CAPN3-213ENST00000565173 Q6ZUT4 128 aa5.25□□□□□ -1.57
CAPN3-213ENST00000565173 CAMK2N2Q96S95 79 aa5.25□□□□□ -1.57
CAPN3-213ENST00000565173 OPRPNQ99935 248 aaPredicted RBP5.25□□□□□ -1.57
CAPN3-213ENST00000565173 SMIM2Q9BVW6 85 aa5.25□□□□□ -1.57
CAPN3-213ENST00000565173 MRPL18Q9H0U6 180 aaKnown RBP5.25□□□□□ -1.57
CAPN3-213ENST00000565173 MAP1LC3AQ9H492 121 aa5.25□□□□□ -1.57
CAPN3-213ENST00000565173 SMCO4Q9NRQ5 59 aa5.25□□□□□ -1.57
CAPN3-213ENST00000565173 LAMTOR2Q9Y2Q5 125 aa5.25□□□□□ -1.57
CAPN3-213ENST00000565173 IGHV3OR16-9A0A0B4J2B5 98 aa5.24□□□□□ -1.57
CAPN3-213ENST00000565173 RPL32P62910 135 aaKnown RBP5.24□□□□□ -1.57
CAPN3-213ENST00000565173 RNF151Q2KHN1 245 aa5.24□□□□□ -1.57
CAPN3-213ENST00000565173 PHF5AQ7RTV0 110 aaKnown RBP5.24□□□□□ -1.57
CAPN3-213ENST00000565173 TRAPPC1Q9Y5R8 145 aa5.24□□□□□ -1.57
CAPN3-213ENST00000565173 TCAPO15273 167 aa5.23□□□□□ -1.57
CAPN3-213ENST00000565173 RAB5AP20339 215 aa5.23□□□□□ -1.57
CAPN3-213ENST00000565173 RPL39P62891 51 aaKnown RBP5.23□□□□□ -1.57
CAPN3-213ENST00000565173 RPL18AQ02543 176 aaKnown RBP5.23□□□□□ -1.57
CAPN3-213ENST00000565173 SPAG11BQ08648 103 aa5.23□□□□□ -1.57
CAPN3-213ENST00000565173 SMAGPQ0VAQ4 97 aa5.23□□□□□ -1.57
CAPN3-213ENST00000565173 KRTAP11-1Q8IUC1 163 aa5.23□□□□□ -1.57
CAPN3-213ENST00000565173 OR10D4PQ8NGN7 298 aa5.23□□□□□ -1.57
CAPN3-213ENST00000565173 YPEL4Q96NS1 127 aa5.23□□□□□ -1.57
CAPN3-213ENST00000565173 MUC2Q02817 5179 aa5.23□□□□□ -1.57
CAPN3-213ENST00000565173 C1orf137Q5JT78 98 aa5.22□□□□□ -1.57
CAPN3-213ENST00000565173 C10orf25Q5T742 122 aa5.22□□□□□ -1.57
CAPN3-213ENST00000565173 Q8N8P6 123 aa5.22□□□□□ -1.57
CAPN3-213ENST00000565173 TMEM18Q96B42 140 aa5.22□□□□□ -1.57
CAPN3-213ENST00000565173 ALKBH7Q9BT30 221 aaPredicted RBP5.22□□□□□ -1.57
CAPN3-213ENST00000565173 MRPL35Q9NZE8 188 aaKnown RBP5.22□□□□□ -1.57
CAPN3-213ENST00000565173 FAM168BA1KXE4 195 aa5.21□□□□□ -1.58
CAPN3-213ENST00000565173 PRSS47A8MTI9 375 aa5.21□□□□□ -1.58
CAPN3-213ENST00000565173 SCO1O75880 301 aa5.21□□□□□ -1.58
CAPN3-213ENST00000565173 TLX1NBP0CAT3 122 aa5.21□□□□□ -1.58
CAPN3-213ENST00000565173 IFI27P40305 119 aaPredicted RBP5.21□□□□□ -1.58
CAPN3-213ENST00000565173 MRPS36P82909 103 aaKnown RBP5.21□□□□□ -1.58
CAPN3-213ENST00000565173 KRTAP7-1Q8IUC3 87 aa5.21□□□□□ -1.58
CAPN3-213ENST00000565173 ORAOV1Q8WV07 137 aa5.21□□□□□ -1.58
CAPN3-213ENST00000565173 NXT2Q9NPJ8 142 aaKnown RBP5.21□□□□□ -1.58
CAPN3-213ENST00000565173 F8WDY8 70 aa5.2□□□□□ -1.58
CAPN3-213ENST00000565173 IGLV7-43P04211 117 aa5.2□□□□□ -1.58
CAPN3-213ENST00000565173 KIAA0087Q14695 138 aa5.2□□□□□ -1.58
CAPN3-213ENST00000565173 UNQ6190/PRO20217Q6UXQ8 127 aa5.2□□□□□ -1.58
CAPN3-213ENST00000565173 PRR26Q8N8Z3 221 aa5.2□□□□□ -1.58
CAPN3-213ENST00000565173 SPANXA1Q9NS26 97 aa5.2□□□□□ -1.58
CAPN3-213ENST00000565173 C6orf48Q9UBA6 75 aa5.2□□□□□ -1.58
CAPN3-213ENST00000565173 NDUFA1O15239 70 aa5.19□□□□□ -1.58
CAPN3-213ENST00000565173 ORMDL2Q53FV1 153 aa5.19□□□□□ -1.58
CAPN3-213ENST00000565173 FA2HQ7L5A8 372 aa5.19□□□□□ -1.58
CAPN3-213ENST00000565173 A0A087WZ39 114 aa5.18□□□□□ -1.58
CAPN3-213ENST00000565173 IFITM10A6NMD0 228 aa5.18□□□□□ -1.58
CAPN3-213ENST00000565173 H0Y9J4 135 aa5.18□□□□□ -1.58
CAPN3-213ENST00000565173 K7EMI3 77 aa5.18□□□□□ -1.58
CAPN3-213ENST00000565173 ATP6V1G1O75348 118 aa5.18□□□□□ -1.58
CAPN3-213ENST00000565173 KRTAP1-4P0C5Y4 121 aa5.18□□□□□ -1.58
CAPN3-213ENST00000565173 LINC00242Q5T6M2 205 aa5.18□□□□□ -1.58
CAPN3-213ENST00000565173 C2orf66Q6UXQ4 117 aa5.18□□□□□ -1.58
CAPN3-213ENST00000565173 DIRC1Q969H9 104 aa5.18□□□□□ -1.58
CAPN3-213ENST00000565173 CYSLTR1Q9Y271 337 aa5.18□□□□□ -1.58
CAPN3-213ENST00000565173 IGLV4-3A0A075B6K6 122 aa5.17□□□□□ -1.58
CAPN3-213ENST00000565173 COLCA2A8K830 154 aa5.17□□□□□ -1.58
CAPN3-213ENST00000565173 TRGC2P03986 189 aa5.17□□□□□ -1.58
CAPN3-213ENST00000565173 S100A1P23297 94 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 228.4 ms