RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 A0A096LNI7 61 aa19.49■□□□□ 0.71
CMTM4-204ENST00000563952 CYSLTR1Q9Y271 337 aa19.49■□□□□ 0.71
CMTM4-204ENST00000563952 ORMDL2Q53FV1 153 aa19.48■□□□□ 0.71
CMTM4-204ENST00000563952 C2orf66Q6UXQ4 117 aa19.48■□□□□ 0.71
CMTM4-204ENST00000563952 TMEM141Q96I45 108 aa19.48■□□□□ 0.71
CMTM4-204ENST00000563952 NXT2Q9NPJ8 142 aaKnown RBP19.48■□□□□ 0.71
CMTM4-204ENST00000563952 PLAC8Q9NZF1 115 aa19.48■□□□□ 0.71
CMTM4-204ENST00000563952 PKIGQ9Y2B9 76 aa19.48■□□□□ 0.71
CMTM4-204ENST00000563952 C10orf91Q5T1B1 145 aa19.47■□□□□ 0.71
CMTM4-204ENST00000563952 CAMK2N2Q96S95 79 aa19.47■□□□□ 0.71
CMTM4-204ENST00000563952 SPAG11BQ08648 103 aa19.46■□□□□ 0.71
CMTM4-204ENST00000563952 Q6ZRU5 148 aa19.46■□□□□ 0.71
CMTM4-204ENST00000563952 CARHSP1Q9Y2V2 147 aaKnown RBP19.46■□□□□ 0.71
CMTM4-204ENST00000563952 IGHV3OR16-9A0A0B4J2B5 98 aa19.45■□□□□ 0.7
CMTM4-204ENST00000563952 RPS10P5Q9NQ39 176 aa19.45■□□□□ 0.7
CMTM4-204ENST00000563952 DMBT1Q9UGM3 2413 aaPredicted RBP19.44■□□□□ 0.7
CMTM4-204ENST00000563952 K7EMI3 77 aa19.44■□□□□ 0.7
CMTM4-204ENST00000563952 STPG4Q8N801 248 aa19.44■□□□□ 0.7
CMTM4-204ENST00000563952 RHEBQ15382 184 aa19.43■□□□□ 0.7
CMTM4-204ENST00000563952 TEX43Q6ZNM6 134 aa19.43■□□□□ 0.7
CMTM4-204ENST00000563952 ORAOV1Q8WV07 137 aa19.43■□□□□ 0.7
CMTM4-204ENST00000563952 C2orf48Q96LS8 159 aa19.43■□□□□ 0.7
CMTM4-204ENST00000563952 GNB1LQ9BYB4 327 aa19.43■□□□□ 0.7
CMTM4-204ENST00000563952 TGIF2-C20orf24A0A0A6YYL0 155 aa19.42■□□□□ 0.7
CMTM4-204ENST00000563952 J3QL48 77 aa19.42■□□□□ 0.7
CMTM4-204ENST00000563952 OR10D4PQ8NGN7 298 aa19.42■□□□□ 0.7
CMTM4-204ENST00000563952 LINC00474Q9P2X8 69 aa19.42■□□□□ 0.7
CMTM4-204ENST00000563952 Q6ZN92 141 aa19.41■□□□□ 0.7
CMTM4-204ENST00000563952 LINC00242Q5T6M2 205 aa19.4■□□□□ 0.7
CMTM4-204ENST00000563952 ZC2HC1BQ5TFG8 222 aa19.4■□□□□ 0.7
CMTM4-204ENST00000563952 C2orf88Q9BSF0 95 aa19.4■□□□□ 0.7
CMTM4-204ENST00000563952 LOC107984640A0A0U1RRK4 108 aa19.39■□□□□ 0.69
CMTM4-204ENST00000563952 HNRNPA3P51991 378 aaKnown RBP19.38■□□□□ 0.69
CMTM4-204ENST00000563952 GAGE2BQ13066 116 aa19.38■□□□□ 0.69
CMTM4-204ENST00000563952 C7orf33Q8WU49 177 aa19.38■□□□□ 0.69
CMTM4-204ENST00000563952 VCX2Q9H322 139 aa19.38■□□□□ 0.69
CMTM4-204ENST00000563952 IGIPA6NJ69 53 aa19.36■□□□□ 0.69
CMTM4-204ENST00000563952 KRTAP29-1A8MX34 341 aaPredicted RBP19.36■□□□□ 0.69
CMTM4-204ENST00000563952 UBE2D1P51668 147 aa19.36■□□□□ 0.69
CMTM4-204ENST00000563952 COX19Q49B96 90 aa19.36■□□□□ 0.69
CMTM4-204ENST00000563952 G0S2P27469 103 aa19.35■□□□□ 0.69
CMTM4-204ENST00000563952 PTTG1IPP53801 180 aa19.35■□□□□ 0.69
CMTM4-204ENST00000563952 LINC00173Q6ZV60 143 aa19.35■□□□□ 0.69
CMTM4-204ENST00000563952 AMELXQ99217 191 aa19.35■□□□□ 0.69
CMTM4-204ENST00000563952 ALKBH7Q9BT30 221 aaPredicted RBP19.35■□□□□ 0.69
CMTM4-204ENST00000563952 A0A087WZ39 114 aa19.34■□□□□ 0.69
CMTM4-204ENST00000563952 A0A0J9YXV3 536 aa19.34■□□□□ 0.69
CMTM4-204ENST00000563952 MRPL18Q9H0U6 180 aaKnown RBP19.34■□□□□ 0.69
CMTM4-204ENST00000563952 MT-ND6P03923 174 aa19.33■□□□□ 0.68
CMTM4-204ENST00000563952 NPSP0C0P6 89 aa19.33■□□□□ 0.68
CMTM4-204ENST00000563952 FABP9Q0Z7S8 132 aa19.33■□□□□ 0.68
CMTM4-204ENST00000563952 APOC3P02656 99 aa19.32■□□□□ 0.68
CMTM4-204ENST00000563952 TOMM6Q96B49 74 aa19.32■□□□□ 0.68
CMTM4-204ENST00000563952 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.31■□□□□ 0.68
CMTM4-204ENST00000563952 NDUFA1O15239 70 aa19.31■□□□□ 0.68
CMTM4-204ENST00000563952 RPL18AQ02543 176 aaKnown RBP19.31■□□□□ 0.68
CMTM4-204ENST00000563952 F8WDY8 70 aa19.3■□□□□ 0.68
CMTM4-204ENST00000563952 RNF151Q2KHN1 245 aa19.29■□□□□ 0.68
CMTM4-204ENST00000563952 PAPPA-AS1Q5QFB9 102 aa19.29■□□□□ 0.68
CMTM4-204ENST00000563952 TIMM17AQ99595 171 aa19.29■□□□□ 0.68
CMTM4-204ENST00000563952 MRPL35Q9NZE8 188 aaKnown RBP19.29■□□□□ 0.68
CMTM4-204ENST00000563952 NDUFA5Q16718 116 aa19.28■□□□□ 0.68
CMTM4-204ENST00000563952 C10orf25Q5T742 122 aa19.28■□□□□ 0.68
CMTM4-204ENST00000563952 UNQ6190/PRO20217Q6UXQ8 127 aa19.27■□□□□ 0.68
CMTM4-204ENST00000563952 SCGB3A1Q96QR1 104 aa19.27■□□□□ 0.68
CMTM4-204ENST00000563952 PKHD1L1Q86WI1 4243 aa19.26■□□□□ 0.67
CMTM4-204ENST00000563952 SNAPINO95295 136 aa19.25■□□□□ 0.67
CMTM4-204ENST00000563952 OXTP01178 125 aa19.25■□□□□ 0.67
CMTM4-204ENST00000563952 LINC01546A6NGU7 62 aa19.24■□□□□ 0.67
CMTM4-204ENST00000563952 KIAA0087Q14695 138 aa19.24■□□□□ 0.67
CMTM4-204ENST00000563952 FA2HQ7L5A8 372 aa19.24■□□□□ 0.67
CMTM4-204ENST00000563952 ERASQ7Z444 233 aa19.24■□□□□ 0.67
CMTM4-204ENST00000563952 SVBPQ8N300 66 aa19.24■□□□□ 0.67
CMTM4-204ENST00000563952 LINC01561Q8N1V8 128 aa19.23■□□□□ 0.67
CMTM4-204ENST00000563952 SMCO4Q9NRQ5 59 aa19.23■□□□□ 0.67
CMTM4-204ENST00000563952 C6orf48Q9UBA6 75 aa19.23■□□□□ 0.67
CMTM4-204ENST00000563952 FAM19A3Q7Z5A8 133 aa19.22■□□□□ 0.67
CMTM4-204ENST00000563952 TRAPPC1Q9Y5R8 145 aa19.22■□□□□ 0.67
CMTM4-204ENST00000563952 A0A1W2PNN7 141 aa19.21■□□□□ 0.67
CMTM4-204ENST00000563952 PRR3P79522 188 aaKnown RBP19.21■□□□□ 0.67
CMTM4-204ENST00000563952 SEC11AP67812 179 aa19.2■□□□□ 0.66
CMTM4-204ENST00000563952 C2orf82Q6UX34 121 aa19.2■□□□□ 0.66
CMTM4-204ENST00000563952 GEMIN7Q9H840 131 aaKnown RBP19.2■□□□□ 0.66
CMTM4-204ENST00000563952 LRP1Q07954 4544 aaKnown RBP19.19■□□□□ 0.66
CMTM4-204ENST00000563952 HERVK_113P63121 156 aa19.19■□□□□ 0.66
CMTM4-204ENST00000563952 C9orf116Q5BN46 136 aaPredicted RBP19.19■□□□□ 0.66
CMTM4-204ENST00000563952 TOMM7Q9P0U1 55 aa19.18■□□□□ 0.66
CMTM4-204ENST00000563952 LINC01549A6NIU2 74 aa19.17■□□□□ 0.66
CMTM4-204ENST00000563952 PRSS2P07478 247 aa19.17■□□□□ 0.66
CMTM4-204ENST00000563952 CDKN2A-AS1Q9UH64 79 aa19.17■□□□□ 0.66
CMTM4-204ENST00000563952 TLX1NBP0CAT3 122 aa19.15■□□□□ 0.66
CMTM4-204ENST00000563952 Q6ZRP5 223 aa19.15■□□□□ 0.66
CMTM4-204ENST00000563952 PACRGQ96M98 296 aaPredicted RBP19.15■□□□□ 0.66
CMTM4-204ENST00000563952 TRBV30A0A0K0K1B3 111 aa19.14■□□□□ 0.65
CMTM4-204ENST00000563952 GAGE2EQ4V326 116 aa19.14■□□□□ 0.65
CMTM4-204ENST00000563952 GAGE2DQ9UEU5 116 aa19.14■□□□□ 0.65
CMTM4-204ENST00000563952 FAT3Q8TDW7 4589 aa19.14■□□□□ 0.65
CMTM4-204ENST00000563952 CKS1BP61024 79 aa19.12■□□□□ 0.65
CMTM4-204ENST00000563952 LINC00469Q8N7U9 141 aa19.12■□□□□ 0.65
CMTM4-204ENST00000563952 C18orf32Q8TCD1 76 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms