RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 COX7CP15954 63 aa9.3□□□□□ -0.92
CCDC187-201ENST00000563590 TRBV6-5A0A0K0K1A5 114 aa9.29□□□□□ -0.92
CCDC187-201ENST00000563590 F8P00451 2351 aa9.29□□□□□ -0.92
CCDC187-201ENST00000563590 HRCT1Q6UXD1 115 aa9.29□□□□□ -0.92
CCDC187-201ENST00000563590 WFDC9Q8NEX5 89 aa9.29□□□□□ -0.92
CCDC187-201ENST00000563590 NBEAL1Q6ZS30 2694 aa9.29□□□□□ -0.92
CCDC187-201ENST00000563590 ATOX1O00244 68 aa9.28□□□□□ -0.92
CCDC187-201ENST00000563590 LITAFQ99732 161 aa9.28□□□□□ -0.92
CCDC187-201ENST00000563590 SPANXDQ9BXN6 97 aa9.28□□□□□ -0.92
CCDC187-201ENST00000563590 SPANXCQ9NY87 97 aa9.28□□□□□ -0.92
CCDC187-201ENST00000563590 UBE2L6O14933 153 aa9.28□□□□□ -0.92
CCDC187-201ENST00000563590 MRPS36P82909 103 aaKnown RBP9.28□□□□□ -0.92
CCDC187-201ENST00000563590 LINC00526Q96FQ7 95 aa9.28□□□□□ -0.92
CCDC187-201ENST00000563590 USMG5Q96IX5 58 aa9.28□□□□□ -0.92
CCDC187-201ENST00000563590 CITED2Q99967 270 aaPredicted RBP9.27□□□□□ -0.93
CCDC187-201ENST00000563590 NCR3O14931 201 aa9.27□□□□□ -0.93
CCDC187-201ENST00000563590 LECT2O14960 151 aa9.27□□□□□ -0.93
CCDC187-201ENST00000563590 COX6A2Q02221 97 aa9.27□□□□□ -0.93
CCDC187-201ENST00000563590 COPS9Q8WXC6 57 aa9.27□□□□□ -0.93
CCDC187-201ENST00000563590 TRGV1A0A0A0MS02 117 aa9.26□□□□□ -0.93
CCDC187-201ENST00000563590 MALP21145 153 aa9.26□□□□□ -0.93
CCDC187-201ENST00000563590 TRAV23DV6A0A075B6W5 121 aa9.26□□□□□ -0.93
CCDC187-201ENST00000563590 A0A0J9YX75 114 aa9.26□□□□□ -0.93
CCDC187-201ENST00000563590 LINC01356Q8N9X3 169 aa9.26□□□□□ -0.93
CCDC187-201ENST00000563590 VPS13CQ709C8 3753 aa9.26□□□□□ -0.93
CCDC187-201ENST00000563590 A0A096LPF7 62 aa9.25□□□□□ -0.93
CCDC187-201ENST00000563590 RPL36AP83881 106 aaKnown RBP9.25□□□□□ -0.93
CCDC187-201ENST00000563590 RPL36ALQ969Q0 106 aaKnown RBP9.25□□□□□ -0.93
CCDC187-201ENST00000563590 C9orf85Q96MD7 179 aa9.25□□□□□ -0.93
CCDC187-201ENST00000563590 IMUPQ9GZP8 106 aa9.25□□□□□ -0.93
CCDC187-201ENST00000563590 FAM218AQ96MZ4 157 aa9.25□□□□□ -0.93
CCDC187-201ENST00000563590 MGAM2Q2M2H8 2515 aa9.25□□□□□ -0.93
CCDC187-201ENST00000563590 DSCR9P59020 149 aa9.25□□□□□ -0.93
CCDC187-201ENST00000563590 DEFB113Q30KQ7 82 aa9.25□□□□□ -0.93
CCDC187-201ENST00000563590 Q6ZSN1 163 aa9.25□□□□□ -0.93
CCDC187-201ENST00000563590 MIR7-3HGQ8N6C7 128 aa9.24□□□□□ -0.93
CCDC187-201ENST00000563590 SND1-IT1Q9HBX3 110 aa9.24□□□□□ -0.93
CCDC187-201ENST00000563590 UBE2D4Q9Y2X8 147 aa9.23□□□□□ -0.93
CCDC187-201ENST00000563590 ESM1Q9NQ30 184 aa9.23□□□□□ -0.93
CCDC187-201ENST00000563590 SETXQ7Z333 2677 aaKnown RBP9.23□□□□□ -0.93
CCDC187-201ENST00000563590 C4orf26Q17RF5 130 aa9.23□□□□□ -0.93
CCDC187-201ENST00000563590 DCANP1Q8TF63 244 aa9.23□□□□□ -0.93
CCDC187-201ENST00000563590 WFDC11Q8NEX6 87 aa9.22□□□□□ -0.93
CCDC187-201ENST00000563590 ZNF415Q09FC8 603 aa9.22□□□□□ -0.93
CCDC187-201ENST00000563590 SOSTDC1Q6X4U4 206 aa9.22□□□□□ -0.93
CCDC187-201ENST00000563590 TRGV2A0A075B6R0 118 aa9.22□□□□□ -0.93
CCDC187-201ENST00000563590 NDUFA1O15239 70 aa9.22□□□□□ -0.93
CCDC187-201ENST00000563590 HTN3P15516 51 aa9.22□□□□□ -0.93
CCDC187-201ENST00000563590 C20orf197Q8N268 126 aa9.22□□□□□ -0.93
CCDC187-201ENST00000563590 USP17L23D6RBM5 183 aa9.21□□□□□ -0.93
CCDC187-201ENST00000563590 RPL18AQ02543 176 aaKnown RBP9.21□□□□□ -0.93
CCDC187-201ENST00000563590 LRRC75A-AS1Q8N1F1 130 aa9.21□□□□□ -0.93
CCDC187-201ENST00000563590 FAM104AQ969W3 186 aa9.21□□□□□ -0.93
CCDC187-201ENST00000563590 LINC01600Q96MT4 127 aa9.21□□□□□ -0.93
CCDC187-201ENST00000563590 IGHG2P01859 326 aa9.21□□□□□ -0.94
CCDC187-201ENST00000563590 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.21□□□□□ -0.94
CCDC187-201ENST00000563590 DEFB130BP0DP73 79 aa9.21□□□□□ -0.94
CCDC187-201ENST00000563590 DEFB130AP0DP74 79 aa9.21□□□□□ -0.94
CCDC187-201ENST00000563590 WFDC10AQ9H1F0 79 aa9.21□□□□□ -0.94
CCDC187-201ENST00000563590 A0A087WYN8 130 aa9.2□□□□□ -0.94
CCDC187-201ENST00000563590 HILS1P60008 231 aa9.2□□□□□ -0.94
CCDC187-201ENST00000563590 STHQ8IWL8 128 aa9.2□□□□□ -0.94
CCDC187-201ENST00000563590 CYSTM1Q9H1C7 97 aa9.2□□□□□ -0.94
CCDC187-201ENST00000563590 MAST4O15021 2626 aa9.2□□□□□ -0.94
CCDC187-201ENST00000563590 NOTCH1P46531 2555 aa9.2□□□□□ -0.94
CCDC187-201ENST00000563590 C5orf38Q86SI9 138 aa9.19□□□□□ -0.94
CCDC187-201ENST00000563590 LINC00846Q9NV44 126 aa9.19□□□□□ -0.94
CCDC187-201ENST00000563590 PYGO1Q9Y3Y4 419 aa9.19□□□□□ -0.94
CCDC187-201ENST00000563590 GHRHP01286 108 aa9.19□□□□□ -0.94
CCDC187-201ENST00000563590 CLPSL2Q6UWE3 100 aa9.19□□□□□ -0.94
CCDC187-201ENST00000563590 TRAV13-2A0A0B4J235 113 aa9.19□□□□□ -0.94
CCDC187-201ENST00000563590 CHCHD7Q9BUK0 85 aa9.19□□□□□ -0.94
CCDC187-201ENST00000563590 C1orf43Q9BWL3 253 aa9.19□□□□□ -0.94
CCDC187-201ENST00000563590 A6NDX4 124 aa9.18□□□□□ -0.94
CCDC187-201ENST00000563590 TMEM243Q9BU79 118 aa9.18□□□□□ -0.94
CCDC187-201ENST00000563590 F5H768 121 aa9.18□□□□□ -0.94
CCDC187-201ENST00000563590 DEFB4AO15263 64 aa9.18□□□□□ -0.94
CCDC187-201ENST00000563590 PLA2G2AP14555 144 aa9.18□□□□□ -0.94
CCDC187-201ENST00000563590 SERP2Q8N6R1 65 aa9.18□□□□□ -0.94
CCDC187-201ENST00000563590 RBMY1BA6NDE4 496 aaKnown RBP9.17□□□□□ -0.94
CCDC187-201ENST00000563590 RBMY1EA6NEQ0 496 aaKnown RBP9.17□□□□□ -0.94
CCDC187-201ENST00000563590 RBMY1DP0C7P1 496 aaKnown RBP9.17□□□□□ -0.94
CCDC187-201ENST00000563590 RBMY1A1P0DJD3 496 aaKnown RBP9.17□□□□□ -0.94
CCDC187-201ENST00000563590 RBMY1CP0DJD4 496 aa9.17□□□□□ -0.94
CCDC187-201ENST00000563590 LINC00242Q5T6M2 205 aa9.17□□□□□ -0.94
CCDC187-201ENST00000563590 HAMPP81172 84 aa9.17□□□□□ -0.94
CCDC187-201ENST00000563590 C9orf129Q5T035 196 aaKnown RBP9.17□□□□□ -0.94
CCDC187-201ENST00000563590 RBMY1FQ15415 496 aaKnown RBP9.17□□□□□ -0.94
CCDC187-201ENST00000563590 CXCL5P42830 114 aa9.16□□□□□ -0.94
CCDC187-201ENST00000563590 ENHOQ6UWT2 76 aa9.16□□□□□ -0.94
CCDC187-201ENST00000563590 SMIM11BQ8TCY0 68 aa9.16□□□□□ -0.94
CCDC187-201ENST00000563590 H3BUA1 57 aa9.15□□□□□ -0.94
CCDC187-201ENST00000563590 C6orf226Q5I0X4 101 aa9.15□□□□□ -0.94
CCDC187-201ENST00000563590 K7EQG2 157 aa9.15□□□□□ -0.94
CCDC187-201ENST00000563590 DEFB121Q5J5C9 76 aa9.15□□□□□ -0.95
CCDC187-201ENST00000563590 SMIM1B2RUZ4 78 aa9.14□□□□□ -0.95
CCDC187-201ENST00000563590 DPH3Q96FX2 82 aa9.14□□□□□ -0.95
CCDC187-201ENST00000563590 PKIGQ9Y2B9 76 aa9.14□□□□□ -0.95
CCDC187-201ENST00000563590 TIMM17BO60830 172 aa9.14□□□□□ -0.95
CCDC187-201ENST00000563590 K7EMT4 169 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms