RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 OPRPNQ99935 248 aaPredicted RBP10.26□□□□□ -0.77
USB1-208ENST00000563207 C2orf88Q9BSF0 95 aa10.26□□□□□ -0.77
USB1-208ENST00000563207 VCX2Q9H322 139 aa10.26□□□□□ -0.77
USB1-208ENST00000563207 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.25□□□□□ -0.77
USB1-208ENST00000563207 GAGE12HA6NDE8 117 aa10.25□□□□□ -0.77
USB1-208ENST00000563207 HBDP02042 147 aa10.25□□□□□ -0.77
USB1-208ENST00000563207 RNASE13Q5GAN3 156 aaKnown RBP10.25□□□□□ -0.77
USB1-208ENST00000563207 CFAP161Q6P656 301 aa10.25□□□□□ -0.77
USB1-208ENST00000563207 AMELXQ99217 191 aa10.25□□□□□ -0.77
USB1-208ENST00000563207 TRAV13-1A0A0B4J241 112 aa10.24□□□□□ -0.77
USB1-208ENST00000563207 IFITM10A6NMD0 228 aa10.24□□□□□ -0.77
USB1-208ENST00000563207 XCL1P47992 114 aa10.24□□□□□ -0.77
USB1-208ENST00000563207 FLG2Q5D862 2391 aaPredicted RBP10.24□□□□□ -0.77
USB1-208ENST00000563207 FOXI1Q12951 378 aa10.23□□□□□ -0.77
USB1-208ENST00000563207 A0A096LNJ9 63 aa10.22□□□□□ -0.77
USB1-208ENST00000563207 USP17L23D6RBM5 183 aa10.22□□□□□ -0.77
USB1-208ENST00000563207 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.22□□□□□ -0.77
USB1-208ENST00000563207 FAM229AH3BQW9 127 aa10.21□□□□□ -0.77
USB1-208ENST00000563207 HSBP1O75506 76 aa10.21□□□□□ -0.77
USB1-208ENST00000563207 ATP5LO75964 103 aa10.21□□□□□ -0.77
USB1-208ENST00000563207 SEC11AP67812 179 aa10.21□□□□□ -0.77
USB1-208ENST00000563207 LINC00173Q6ZV60 143 aa10.21□□□□□ -0.77
USB1-208ENST00000563207 UBE2D1P51668 147 aa10.2□□□□□ -0.78
USB1-208ENST00000563207 PDZD11Q5EBL8 140 aa10.2□□□□□ -0.78
USB1-208ENST00000563207 FAM19A3Q7Z5A8 133 aa10.2□□□□□ -0.78
USB1-208ENST00000563207 IGHV3OR16-9A0A0B4J2B5 98 aa10.19□□□□□ -0.78
USB1-208ENST00000563207 COX7A2LO14548 114 aa10.19□□□□□ -0.78
USB1-208ENST00000563207 HIST1H2BKO60814 126 aa10.19□□□□□ -0.78
USB1-208ENST00000563207 HIST1H2BJP06899 126 aa10.19□□□□□ -0.78
USB1-208ENST00000563207 HIST1H2BOP23527 126 aa10.19□□□□□ -0.78
USB1-208ENST00000563207 HIST1H2BBP33778 126 aa10.19□□□□□ -0.78
USB1-208ENST00000563207 HIST1H2BDP58876 126 aa10.19□□□□□ -0.78
USB1-208ENST00000563207 HIST1H2BCP62807 126 aa10.19□□□□□ -0.78
USB1-208ENST00000563207 HIST2H2BEQ16778 126 aa10.19□□□□□ -0.78
USB1-208ENST00000563207 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.19□□□□□ -0.78
USB1-208ENST00000563207 Q6ZSA8 131 aa10.19□□□□□ -0.78
USB1-208ENST00000563207 HIST1H2BHQ93079 126 aa10.19□□□□□ -0.78
USB1-208ENST00000563207 HIST1H2BNQ99877 126 aa10.19□□□□□ -0.78
USB1-208ENST00000563207 HIST1H2BMQ99879 126 aa10.19□□□□□ -0.78
USB1-208ENST00000563207 IGHV1-58A0A0C4DH39 117 aa10.18□□□□□ -0.78
USB1-208ENST00000563207 SERF1AO75920 110 aa10.18□□□□□ -0.78
USB1-208ENST00000563207 PMVKQ15126 192 aa10.18□□□□□ -0.78
USB1-208ENST00000563207 PMCHL1Q16048 86 aa10.18□□□□□ -0.78
USB1-208ENST00000563207 LINC00242Q5T6M2 205 aa10.18□□□□□ -0.78
USB1-208ENST00000563207 DMBT1Q9UGM3 2413 aaPredicted RBP10.18□□□□□ -0.78
USB1-208ENST00000563207 APOMO95445 188 aa10.17□□□□□ -0.78
USB1-208ENST00000563207 MALP21145 153 aa10.17□□□□□ -0.78
USB1-208ENST00000563207 CST9LQ9H4G1 147 aa10.17□□□□□ -0.78
USB1-208ENST00000563207 GVQW2A0A096LPI5 108 aaPredicted RBP10.16□□□□□ -0.78
USB1-208ENST00000563207 hDV102S1A0JD36 115 aa10.16□□□□□ -0.78
USB1-208ENST00000563207 PRSS1P07477 247 aa10.16□□□□□ -0.78
USB1-208ENST00000563207 HERVK_113P63121 156 aa10.16□□□□□ -0.78
USB1-208ENST00000563207 LINC00528Q8N1L1 170 aa10.16□□□□□ -0.78
USB1-208ENST00000563207 LINC01561Q8N1V8 128 aa10.16□□□□□ -0.78
USB1-208ENST00000563207 C15orf56Q8N910 161 aa10.16□□□□□ -0.78
USB1-208ENST00000563207 LINC00310P59036 64 aa10.15□□□□□ -0.78
USB1-208ENST00000563207 ZC2HC1BQ5TFG8 222 aa10.15□□□□□ -0.78
USB1-208ENST00000563207 SCXQ7RTU7 201 aa10.15□□□□□ -0.78
USB1-208ENST00000563207 C5orf38Q86SI9 138 aa10.15□□□□□ -0.78
USB1-208ENST00000563207 A0A087WZ39 114 aa10.14□□□□□ -0.79
USB1-208ENST00000563207 TINCRA0A1B0GVN0 87 aa10.14□□□□□ -0.79
USB1-208ENST00000563207 CNBPP62633 177 aaKnown RBP10.14□□□□□ -0.79
USB1-208ENST00000563207 FAM19A2Q8N3H0 131 aa10.14□□□□□ -0.79
USB1-208ENST00000563207 IFI27L1Q96BM0 104 aa10.14□□□□□ -0.79
USB1-208ENST00000563207 GEMIN7Q9H840 131 aaKnown RBP10.14□□□□□ -0.79
USB1-208ENST00000563207 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.13□□□□□ -0.79
USB1-208ENST00000563207 ZNF561-AS1K7EIQ3 104 aa10.13□□□□□ -0.79
USB1-208ENST00000563207 LEPROTL1O95214 131 aa10.13□□□□□ -0.79
USB1-208ENST00000563207 COX6A2Q02221 97 aa10.13□□□□□ -0.79
USB1-208ENST00000563207 OR10D4PQ8NGN7 298 aa10.13□□□□□ -0.79
USB1-208ENST00000563207 COA6Q5JTJ3 125 aaKnown RBP10.12□□□□□ -0.79
USB1-208ENST00000563207 HSPB8Q9UJY1 196 aa10.12□□□□□ -0.79
USB1-208ENST00000563207 IGHV3-64A0A075B6Q5 118 aa10.11□□□□□ -0.79
USB1-208ENST00000563207 TRAV12-1A0A0B4J245 112 aa10.11□□□□□ -0.79
USB1-208ENST00000563207 A0A0J9YXV3 536 aa10.11□□□□□ -0.79
USB1-208ENST00000563207 F8WDY8 70 aa10.11□□□□□ -0.79
USB1-208ENST00000563207 NUPR1O60356 82 aa10.11□□□□□ -0.79
USB1-208ENST00000563207 NDUFA6P56556 154 aa10.11□□□□□ -0.79
USB1-208ENST00000563207 KRTAP10-4P60372 401 aaPredicted RBP10.11□□□□□ -0.79
USB1-208ENST00000563207 PACRGQ96M98 296 aaPredicted RBP10.11□□□□□ -0.79
USB1-208ENST00000563207 LRP1Q07954 4544 aaKnown RBP10.11□□□□□ -0.79
USB1-208ENST00000563207 IGLV5-45A0A087WSX0 123 aa10.1□□□□□ -0.79
USB1-208ENST00000563207 HIGD2BQ4VC39 106 aa10.1□□□□□ -0.79
USB1-208ENST00000563207 C9orf163Q8N9P6 203 aa10.1□□□□□ -0.79
USB1-208ENST00000563207 IGLC3P0DOY3 106 aa10.09□□□□□ -0.79
USB1-208ENST00000563207 CIRBP-AS1Q8TBR5 109 aa10.09□□□□□ -0.79
USB1-208ENST00000563207 C2orf48Q96LS8 159 aa10.09□□□□□ -0.79
USB1-208ENST00000563207 LINC00469Q8N7U9 141 aa10.08□□□□□ -0.8
USB1-208ENST00000563207 ORAOV1Q8WV07 137 aa10.08□□□□□ -0.8
USB1-208ENST00000563207 CHAC1Q9BUX1 264 aa10.08□□□□□ -0.8
USB1-208ENST00000563207 CDKN2A-AS1Q9UH64 79 aa10.08□□□□□ -0.8
USB1-208ENST00000563207 H3BRM9 83 aa10.07□□□□□ -0.8
USB1-208ENST00000563207 SLPIP03973 132 aa10.07□□□□□ -0.8
USB1-208ENST00000563207 PLA2G1BP04054 148 aaKnown RBP10.07□□□□□ -0.8
USB1-208ENST00000563207 SPAG11BQ08648 103 aa10.07□□□□□ -0.8
USB1-208ENST00000563207 PKIGQ9Y2B9 76 aa10.07□□□□□ -0.8
USB1-208ENST00000563207 IGLV4-69A0A075B6H9 119 aa10.06□□□□□ -0.8
USB1-208ENST00000563207 J3QL48 77 aa10.06□□□□□ -0.8
USB1-208ENST00000563207 SYCNQ0VAF6 134 aa10.06□□□□□ -0.8
USB1-208ENST00000563207 CHTOPQ9Y3Y2 248 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms