RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 COX6A2Q02221 97 aa10.33□□□□□ -0.76
COMMD4-206ENST00000562610 SVBPQ8N300 66 aa10.33□□□□□ -0.76
COMMD4-206ENST00000562610 MRPL18Q9H0U6 180 aaKnown RBP10.33□□□□□ -0.76
COMMD4-206ENST00000562610 APOMO95445 188 aa10.32□□□□□ -0.76
COMMD4-206ENST00000562610 Q6ZN92 141 aa10.32□□□□□ -0.76
COMMD4-206ENST00000562610 TEX43Q6ZNM6 134 aa10.32□□□□□ -0.76
COMMD4-206ENST00000562610 DPH3Q96FX2 82 aa10.32□□□□□ -0.76
COMMD4-206ENST00000562610 IGLV4-69A0A075B6H9 119 aa10.31□□□□□ -0.76
COMMD4-206ENST00000562610 IGKV2-24A0A0C4DH68 120 aa10.31□□□□□ -0.76
COMMD4-206ENST00000562610 FABP9Q0Z7S8 132 aa10.31□□□□□ -0.76
COMMD4-206ENST00000562610 PRSS3P2Q8NHM4 247 aa10.31□□□□□ -0.76
COMMD4-206ENST00000562610 C2orf88Q9BSF0 95 aa10.31□□□□□ -0.76
COMMD4-206ENST00000562610 TGIF2-C20orf24A0A0A6YYL0 155 aa10.3□□□□□ -0.76
COMMD4-206ENST00000562610 SPAG11BQ08648 103 aa10.3□□□□□ -0.76
COMMD4-206ENST00000562610 SYCNQ0VAF6 134 aa10.3□□□□□ -0.76
COMMD4-206ENST00000562610 CIRBPQ14011 172 aaKnown RBP10.3□□□□□ -0.76
COMMD4-206ENST00000562610 SPACA4Q8TDM5 124 aa10.3□□□□□ -0.76
COMMD4-206ENST00000562610 ALKBH7Q9BT30 221 aaPredicted RBP10.3□□□□□ -0.76
COMMD4-206ENST00000562610 ORAOV1Q8WV07 137 aa10.29□□□□□ -0.76
COMMD4-206ENST00000562610 CAMK2N2Q96S95 79 aa10.29□□□□□ -0.76
COMMD4-206ENST00000562610 PKIGQ9Y2B9 76 aa10.29□□□□□ -0.76
COMMD4-206ENST00000562610 IGHV3OR16-9A0A0B4J2B5 98 aa10.28□□□□□ -0.76
COMMD4-206ENST00000562610 G0S2P27469 103 aa10.28□□□□□ -0.76
COMMD4-206ENST00000562610 MAJINQ3KP22 176 aa10.28□□□□□ -0.76
COMMD4-206ENST00000562610 ZC2HC1BQ5TFG8 222 aa10.28□□□□□ -0.76
COMMD4-206ENST00000562610 A0A087WYN8 130 aa10.27□□□□□ -0.77
COMMD4-206ENST00000562610 A0A096LNI7 61 aa10.27□□□□□ -0.77
COMMD4-206ENST00000562610 Q6ZRU5 148 aa10.27□□□□□ -0.77
COMMD4-206ENST00000562610 OR10D4PQ8NGN7 298 aa10.27□□□□□ -0.77
COMMD4-206ENST00000562610 VCX2Q9H322 139 aa10.27□□□□□ -0.77
COMMD4-206ENST00000562610 SMCO4Q9NRQ5 59 aa10.27□□□□□ -0.77
COMMD4-206ENST00000562610 IGIPA6NJ69 53 aa10.26□□□□□ -0.77
COMMD4-206ENST00000562610 NPSP0C0P6 89 aa10.26□□□□□ -0.77
COMMD4-206ENST00000562610 UBE2D1P51668 147 aa10.26□□□□□ -0.77
COMMD4-206ENST00000562610 LINC00242Q5T6M2 205 aa10.26□□□□□ -0.77
COMMD4-206ENST00000562610 LINC00173Q6ZV60 143 aa10.26□□□□□ -0.77
COMMD4-206ENST00000562610 FA2HQ7L5A8 372 aa10.26□□□□□ -0.77
COMMD4-206ENST00000562610 TOMM6Q96B49 74 aa10.26□□□□□ -0.77
COMMD4-206ENST00000562610 C2orf48Q96LS8 159 aa10.26□□□□□ -0.77
COMMD4-206ENST00000562610 TRAPPC1Q9Y5R8 145 aa10.26□□□□□ -0.77
COMMD4-206ENST00000562610 SRRM2Q9UQ35 2752 aaKnown RBP10.26□□□□□ -0.77
COMMD4-206ENST00000562610 RPL37AP61513 92 aaKnown RBP10.25□□□□□ -0.77
COMMD4-206ENST00000562610 PAPPA-AS1Q5QFB9 102 aa10.25□□□□□ -0.77
COMMD4-206ENST00000562610 AMELXQ99217 191 aa10.25□□□□□ -0.77
COMMD4-206ENST00000562610 TIMM17AQ99595 171 aa10.25□□□□□ -0.77
COMMD4-206ENST00000562610 FLG2Q5D862 2391 aaPredicted RBP10.23□□□□□ -0.77
COMMD4-206ENST00000562610 A0A087WZ39 114 aa10.23□□□□□ -0.77
COMMD4-206ENST00000562610 LOC107984640A0A0U1RRK4 108 aa10.23□□□□□ -0.77
COMMD4-206ENST00000562610 STPG4Q8N801 248 aa10.23□□□□□ -0.77
COMMD4-206ENST00000562610 SCGB3A1Q96QR1 104 aa10.23□□□□□ -0.77
COMMD4-206ENST00000562610 PLAC8Q9NZF1 115 aa10.23□□□□□ -0.77
COMMD4-206ENST00000562610 LINC01546A6NGU7 62 aa10.22□□□□□ -0.77
COMMD4-206ENST00000562610 GAGE2BQ13066 116 aa10.22□□□□□ -0.77
COMMD4-206ENST00000562610 ERASQ7Z444 233 aa10.22□□□□□ -0.77
COMMD4-206ENST00000562610 LINC00474Q9P2X8 69 aa10.22□□□□□ -0.77
COMMD4-206ENST00000562610 LINC01549A6NIU2 74 aa10.21□□□□□ -0.77
COMMD4-206ENST00000562610 NDUFA1O15239 70 aa10.21□□□□□ -0.77
COMMD4-206ENST00000562610 KRTAP10-4P60372 401 aaPredicted RBP10.21□□□□□ -0.77
COMMD4-206ENST00000562610 RPL18AQ02543 176 aaKnown RBP10.21□□□□□ -0.77
COMMD4-206ENST00000562610 A0A0J9YXV3 536 aa10.2□□□□□ -0.78
COMMD4-206ENST00000562610 C18orf32Q8TCD1 76 aa10.2□□□□□ -0.78
COMMD4-206ENST00000562610 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.19□□□□□ -0.78
COMMD4-206ENST00000562610 PTTG1IPP53801 180 aa10.19□□□□□ -0.78
COMMD4-206ENST00000562610 HERVK_113P63121 156 aa10.19□□□□□ -0.78
COMMD4-206ENST00000562610 SEC11AP67812 179 aa10.19□□□□□ -0.78
COMMD4-206ENST00000562610 C7orf33Q8WU49 177 aa10.19□□□□□ -0.78
COMMD4-206ENST00000562610 GEMIN7Q9H840 131 aaKnown RBP10.19□□□□□ -0.78
COMMD4-206ENST00000562610 MRPL35Q9NZE8 188 aaKnown RBP10.19□□□□□ -0.78
COMMD4-206ENST00000562610 F8WDY8 70 aa10.18□□□□□ -0.78
COMMD4-206ENST00000562610 FAM19A3Q7Z5A8 133 aa10.18□□□□□ -0.78
COMMD4-206ENST00000562610 CBLN2Q8IUK8 224 aa10.18□□□□□ -0.78
COMMD4-206ENST00000562610 SLC7A5P1Q8MH63 180 aa10.18□□□□□ -0.78
COMMD4-206ENST00000562610 PACRGQ96M98 296 aaPredicted RBP10.18□□□□□ -0.78
COMMD4-206ENST00000562610 PKHD1L1Q86WI1 4243 aa10.17□□□□□ -0.78
COMMD4-206ENST00000562610 RNF151Q2KHN1 245 aa10.17□□□□□ -0.78
COMMD4-206ENST00000562610 C10orf25Q5T742 122 aa10.17□□□□□ -0.78
COMMD4-206ENST00000562610 UNQ6190/PRO20217Q6UXQ8 127 aa10.17□□□□□ -0.78
COMMD4-206ENST00000562610 LINC01561Q8N1V8 128 aa10.17□□□□□ -0.78
COMMD4-206ENST00000562610 YPEL4Q96NS1 127 aa10.17□□□□□ -0.78
COMMD4-206ENST00000562610 TOMM7Q9P0U1 55 aa10.17□□□□□ -0.78
COMMD4-206ENST00000562610 MYCBP2O75592 4640 aa10.17□□□□□ -0.78
COMMD4-206ENST00000562610 PRSS2P07478 247 aa10.16□□□□□ -0.78
COMMD4-206ENST00000562610 CDKN2A-AS1Q9UH64 79 aa10.16□□□□□ -0.78
COMMD4-206ENST00000562610 LINC00614P0C842 121 aa10.15□□□□□ -0.78
COMMD4-206ENST00000562610 KIAA0087Q14695 138 aa10.15□□□□□ -0.78
COMMD4-206ENST00000562610 C2orf82Q6UX34 121 aa10.15□□□□□ -0.78
COMMD4-206ENST00000562610 LINC00469Q8N7U9 141 aa10.15□□□□□ -0.78
COMMD4-206ENST00000562610 URB1-AS1Q96HZ7 61 aa10.15□□□□□ -0.78
COMMD4-206ENST00000562610 C6orf48Q9UBA6 75 aa10.15□□□□□ -0.78
COMMD4-206ENST00000562610 A0A096LNJ9 63 aa10.14□□□□□ -0.79
COMMD4-206ENST00000562610 HBDP02042 147 aa10.14□□□□□ -0.79
COMMD4-206ENST00000562610 RAB5BP61020 215 aa10.14□□□□□ -0.79
COMMD4-206ENST00000562610 PMCHL1Q16048 86 aa10.14□□□□□ -0.79
COMMD4-206ENST00000562610 HNRNPA3P51991 378 aaKnown RBP10.13□□□□□ -0.79
COMMD4-206ENST00000562610 CKS1BP61024 79 aa10.13□□□□□ -0.79
COMMD4-206ENST00000562610 PMVKQ15126 192 aa10.13□□□□□ -0.79
COMMD4-206ENST00000562610 CST9LQ9H4G1 147 aa10.13□□□□□ -0.79
COMMD4-206ENST00000562610 TRBV30A0A0K0K1B3 111 aa10.12□□□□□ -0.79
COMMD4-206ENST00000562610 TINCRA0A1B0GVN0 87 aa10.12□□□□□ -0.79
COMMD4-206ENST00000562610 NDUFA6P56556 154 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms