RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 I3L3M4 83 aa5.27□□□□□ -1.57
GINS3-204ENST00000561952 XCL1P47992 114 aa5.27□□□□□ -1.57
GINS3-204ENST00000561952 AKR1D1P51857 326 aa5.27□□□□□ -1.57
GINS3-204ENST00000561952 CNBPP62633 177 aaKnown RBP5.27□□□□□ -1.57
GINS3-204ENST00000561952 MRPL54Q6P161 138 aaKnown RBP5.27□□□□□ -1.57
GINS3-204ENST00000561952 SDIM1Q6ZPB5 146 aa5.27□□□□□ -1.57
GINS3-204ENST00000561952 AMN1Q8IY45 258 aa5.27□□□□□ -1.57
GINS3-204ENST00000561952 PACRGQ96M98 296 aaPredicted RBP5.27□□□□□ -1.57
GINS3-204ENST00000561952 ST20Q9HBF5 79 aa5.27□□□□□ -1.57
GINS3-204ENST00000561952 A0A1B0GUT8 65 aa5.26□□□□□ -1.57
GINS3-204ENST00000561952 HBBP68871 147 aa5.26□□□□□ -1.57
GINS3-204ENST00000561952 COX6A2Q02221 97 aa5.26□□□□□ -1.57
GINS3-204ENST00000561952 LINC00526Q96FQ7 95 aa5.26□□□□□ -1.57
GINS3-204ENST00000561952 MRAP2Q96G30 205 aa5.26□□□□□ -1.57
GINS3-204ENST00000561952 TMEM101Q96IK0 257 aa5.26□□□□□ -1.57
GINS3-204ENST00000561952 HIST1H2BLQ99880 126 aa5.26□□□□□ -1.57
GINS3-204ENST00000561952 A0A087WYN8 130 aa5.25□□□□□ -1.57
GINS3-204ENST00000561952 CCL25O15444 150 aa5.25□□□□□ -1.57
GINS3-204ENST00000561952 TSHBP01222 138 aa5.25□□□□□ -1.57
GINS3-204ENST00000561952 S100A2P29034 98 aa5.25□□□□□ -1.57
GINS3-204ENST00000561952 RIGQ13278 110 aa5.25□□□□□ -1.57
GINS3-204ENST00000561952 MAJINQ3KP22 176 aa5.25□□□□□ -1.57
GINS3-204ENST00000561952 RNASE13Q5GAN3 156 aaKnown RBP5.25□□□□□ -1.57
GINS3-204ENST00000561952 CFAP161Q6P656 301 aa5.25□□□□□ -1.57
GINS3-204ENST00000561952 OR5A1Q8NGJ0 315 aa5.25□□□□□ -1.57
GINS3-204ENST00000561952 SPACA4Q8TDM5 124 aa5.25□□□□□ -1.57
GINS3-204ENST00000561952 RNF185Q96GF1 192 aa5.25□□□□□ -1.57
GINS3-204ENST00000561952 RAB4AP20338 218 aa5.24□□□□□ -1.57
GINS3-204ENST00000561952 FCER1GP30273 86 aa5.24□□□□□ -1.57
GINS3-204ENST00000561952 LINC00310P59036 64 aa5.24□□□□□ -1.57
GINS3-204ENST00000561952 FOXI1Q12951 378 aa5.24□□□□□ -1.57
GINS3-204ENST00000561952 PRSS3P2Q8NHM4 247 aa5.24□□□□□ -1.57
GINS3-204ENST00000561952 TMEM18Q96B42 140 aa5.24□□□□□ -1.57
GINS3-204ENST00000561952 C12orf57Q99622 126 aa5.24□□□□□ -1.57
GINS3-204ENST00000561952 ALKBH7Q9BT30 221 aaPredicted RBP5.24□□□□□ -1.57
GINS3-204ENST00000561952 TMEM191AQ9H0A3 160 aa5.24□□□□□ -1.57
GINS3-204ENST00000561952 TRBV6-5A0A0K0K1A5 114 aa5.23□□□□□ -1.57
GINS3-204ENST00000561952 LINC00959A0A1B0GUT2 108 aa5.23□□□□□ -1.57
GINS3-204ENST00000561952 H7C423 109 aa5.23□□□□□ -1.57
GINS3-204ENST00000561952 OXTP01178 125 aa5.23□□□□□ -1.57
GINS3-204ENST00000561952 FABP4P15090 132 aa5.23□□□□□ -1.57
GINS3-204ENST00000561952 ZNF25P17030 456 aaPredicted RBP5.23□□□□□ -1.57
GINS3-204ENST00000561952 CAMPP49913 170 aa5.23□□□□□ -1.57
GINS3-204ENST00000561952 OR10D4PQ8NGN7 298 aa5.23□□□□□ -1.57
GINS3-204ENST00000561952 C18orf32Q8TCD1 76 aa5.23□□□□□ -1.57
GINS3-204ENST00000561952 A0A096LNI7 61 aa5.22□□□□□ -1.57
GINS3-204ENST00000561952 GVQW2A0A096LPI5 108 aaPredicted RBP5.22□□□□□ -1.57
GINS3-204ENST00000561952 NUPR1O60356 82 aa5.22□□□□□ -1.57
GINS3-204ENST00000561952 SERF1AO75920 110 aa5.22□□□□□ -1.57
GINS3-204ENST00000561952 POLR2KP53803 58 aaKnown RBP5.22□□□□□ -1.57
GINS3-204ENST00000561952 CIRBPQ14011 172 aaKnown RBP5.22□□□□□ -1.57
GINS3-204ENST00000561952 JOSD1Q15040 202 aaPredicted RBP5.22□□□□□ -1.57
GINS3-204ENST00000561952 SS18Q15532 418 aa5.22□□□□□ -1.57
GINS3-204ENST00000561952 KIAA1644Q3SXP7 199 aa5.22□□□□□ -1.57
GINS3-204ENST00000561952 PDZD11Q5EBL8 140 aa5.22□□□□□ -1.57
GINS3-204ENST00000561952 PYY3Q5JQD4 70 aa5.22□□□□□ -1.57
GINS3-204ENST00000561952 STPG4Q8N801 248 aa5.22□□□□□ -1.57
GINS3-204ENST00000561952 C7orf33Q8WU49 177 aa5.22□□□□□ -1.57
GINS3-204ENST00000561952 HMCN2Q8NDA2 5059 aa5.22□□□□□ -1.57
GINS3-204ENST00000561952 IGHV1-58A0A0C4DH39 117 aa5.21□□□□□ -1.58
GINS3-204ENST00000561952 SUMO2P61956 95 aaKnown RBP5.21□□□□□ -1.58
GINS3-204ENST00000561952 MRPL51Q4U2R6 128 aaKnown RBP5.21□□□□□ -1.58
GINS3-204ENST00000561952 FAM104BQ5XKR9 115 aa5.21□□□□□ -1.58
GINS3-204ENST00000561952 BAGE3Q86Y29 109 aa5.21□□□□□ -1.58
GINS3-204ENST00000561952 ZNF664Q8N3J9 261 aa5.21□□□□□ -1.58
GINS3-204ENST00000561952 NRACQ8N912 160 aa5.21□□□□□ -1.58
GINS3-204ENST00000561952 CARD19Q96LW7 228 aa5.21□□□□□ -1.58
GINS3-204ENST00000561952 CDC42SE2Q9NRR3 84 aa5.21□□□□□ -1.58
GINS3-204ENST00000561952 TRAV13-1A0A0B4J241 112 aa5.2□□□□□ -1.58
GINS3-204ENST00000561952 TRBV27A0A0K0K1C4 114 aa5.2□□□□□ -1.58
GINS3-204ENST00000561952 ZNF561-AS1K7EIQ3 104 aa5.2□□□□□ -1.58
GINS3-204ENST00000561952 VCYO14598 125 aa5.2□□□□□ -1.58
GINS3-204ENST00000561952 MALP21145 153 aa5.2□□□□□ -1.58
GINS3-204ENST00000561952 S100A12P80511 92 aa5.2□□□□□ -1.58
GINS3-204ENST00000561952 SERTAD4-AS1Q5TG53 156 aa5.2□□□□□ -1.58
GINS3-204ENST00000561952 Q6ZUT4 128 aa5.2□□□□□ -1.58
GINS3-204ENST00000561952 PLAC8Q9NZF1 115 aa5.2□□□□□ -1.58
GINS3-204ENST00000561952 PLA2G2DQ9UNK4 145 aa5.2□□□□□ -1.58
GINS3-204ENST00000561952 TNXBP22105 4242 aa5.2□□□□□ -1.58
GINS3-204ENST00000561952 CKS2P33552 79 aa5.19□□□□□ -1.58
GINS3-204ENST00000561952 RPL39P62891 51 aaKnown RBP5.19□□□□□ -1.58
GINS3-204ENST00000561952 GAGE2BQ13066 116 aa5.19□□□□□ -1.58
GINS3-204ENST00000561952 CD164L2Q6UWJ8 174 aa5.19□□□□□ -1.58
GINS3-204ENST00000561952 C5orf38Q86SI9 138 aa5.19□□□□□ -1.58
GINS3-204ENST00000561952 MRPL52Q86TS9 123 aaKnown RBP5.19□□□□□ -1.58
GINS3-204ENST00000561952 CHCHD1Q96BP2 118 aaKnown RBP5.19□□□□□ -1.58
GINS3-204ENST00000561952 URB1-AS1Q96HZ7 61 aa5.19□□□□□ -1.58
GINS3-204ENST00000561952 KIR2DL4Q99706 377 aa5.19□□□□□ -1.58
GINS3-204ENST00000561952 UBE2D4Q9Y2X8 147 aa5.19□□□□□ -1.58
GINS3-204ENST00000561952 IGLV4-69A0A075B6H9 119 aa5.18□□□□□ -1.58
GINS3-204ENST00000561952 D6R8Y8 96 aa5.18□□□□□ -1.58
GINS3-204ENST00000561952 COX7A2LO14548 114 aa5.18□□□□□ -1.58
GINS3-204ENST00000561952 PPBPP02775 128 aa5.18□□□□□ -1.58
GINS3-204ENST00000561952 SYCNQ0VAF6 134 aa5.18□□□□□ -1.58
GINS3-204ENST00000561952 Q6ZRU5 148 aa5.18□□□□□ -1.58
GINS3-204ENST00000561952 LAMTOR2Q9Y2Q5 125 aa5.18□□□□□ -1.58
GINS3-204ENST00000561952 TCAPO15273 167 aa5.17□□□□□ -1.58
GINS3-204ENST00000561952 TNFRSF6BO95407 300 aa5.17□□□□□ -1.58
GINS3-204ENST00000561952 PPP1R17O96001 155 aa5.17□□□□□ -1.58
GINS3-204ENST00000561952 NPYP01303 97 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms