RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 AP5S1Q9NUS5 200 aa8.89□□□□□ -0.99
TPM1-230ENST00000561266 CYSLTR1Q9Y271 337 aa8.89□□□□□ -0.99
TPM1-230ENST00000561266 TRAPPC1Q9Y5R8 145 aa8.89□□□□□ -0.99
TPM1-230ENST00000561266 IGHV3OR16-9A0A0B4J2B5 98 aa8.88□□□□□ -0.99
TPM1-230ENST00000561266 COX7A2LO14548 114 aa8.88□□□□□ -0.99
TPM1-230ENST00000561266 LINC00242Q5T6M2 205 aa8.88□□□□□ -0.99
TPM1-230ENST00000561266 PRSS3P2Q8NHM4 247 aa8.88□□□□□ -0.99
TPM1-230ENST00000561266 TOMM6Q96B49 74 aa8.88□□□□□ -0.99
TPM1-230ENST00000561266 AMELXQ99217 191 aa8.88□□□□□ -0.99
TPM1-230ENST00000561266 IGLV4-69A0A075B6H9 119 aa8.87□□□□□ -0.99
TPM1-230ENST00000561266 EPM2AB3EWF7 344 aa8.87□□□□□ -0.99
TPM1-230ENST00000561266 K7EMI3 77 aa8.87□□□□□ -0.99
TPM1-230ENST00000561266 C18orf32Q8TCD1 76 aa8.87□□□□□ -0.99
TPM1-230ENST00000561266 IGHV3-64A0A075B6Q5 118 aa8.86□□□□□ -0.99
TPM1-230ENST00000561266 A0A096LNJ9 63 aa8.86□□□□□ -0.99
TPM1-230ENST00000561266 UBE2D1P51668 147 aa8.86□□□□□ -0.99
TPM1-230ENST00000561266 CIRBPQ14011 172 aaKnown RBP8.86□□□□□ -0.99
TPM1-230ENST00000561266 Q6ZRU5 148 aa8.85□□□□□ -0.99
TPM1-230ENST00000561266 SRRM2Q9UQ35 2752 aaKnown RBP8.84□□□□□ -0.99
TPM1-230ENST00000561266 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.84□□□□□ -0.99
TPM1-230ENST00000561266 MALP21145 153 aa8.84□□□□□ -0.99
TPM1-230ENST00000561266 KRTAP10-4P60372 401 aaPredicted RBP8.84□□□□□ -0.99
TPM1-230ENST00000561266 TEX43Q6ZNM6 134 aa8.84□□□□□ -0.99
TPM1-230ENST00000561266 LINC00528Q8N1L1 170 aa8.84□□□□□ -0.99
TPM1-230ENST00000561266 SYCNQ0VAF6 134 aa8.83□□□□□ -1
TPM1-230ENST00000561266 FA2HQ7L5A8 372 aa8.83□□□□□ -1
TPM1-230ENST00000561266 TIMM17AQ99595 171 aa8.83□□□□□ -1
TPM1-230ENST00000561266 VCX2Q9H322 139 aa8.83□□□□□ -1
TPM1-230ENST00000561266 FLG2Q5D862 2391 aaPredicted RBP8.82□□□□□ -1
TPM1-230ENST00000561266 A0A096LNI7 61 aa8.82□□□□□ -1
TPM1-230ENST00000561266 ZNF561-AS1K7EIQ3 104 aa8.82□□□□□ -1
TPM1-230ENST00000561266 PMCHL1Q16048 86 aa8.82□□□□□ -1
TPM1-230ENST00000561266 C10orf25Q5T742 122 aa8.82□□□□□ -1
TPM1-230ENST00000561266 ERASQ7Z444 233 aa8.82□□□□□ -1
TPM1-230ENST00000561266 SPACA4Q8TDM5 124 aa8.82□□□□□ -1
TPM1-230ENST00000561266 CARD19Q96LW7 228 aa8.82□□□□□ -1
TPM1-230ENST00000561266 SCGB3A1Q96QR1 104 aa8.82□□□□□ -1
TPM1-230ENST00000561266 SMCO4Q9NRQ5 59 aa8.82□□□□□ -1
TPM1-230ENST00000561266 A0A087WYN8 130 aa8.81□□□□□ -1
TPM1-230ENST00000561266 A0A087WZ39 114 aa8.81□□□□□ -1
TPM1-230ENST00000561266 A0A0J9YXV3 536 aa8.81□□□□□ -1
TPM1-230ENST00000561266 NPSP0C0P6 89 aa8.81□□□□□ -1
TPM1-230ENST00000561266 SPAG11BQ08648 103 aa8.81□□□□□ -1
TPM1-230ENST00000561266 KIAA0087Q14695 138 aa8.81□□□□□ -1
TPM1-230ENST00000561266 FAM19A3Q7Z5A8 133 aa8.81□□□□□ -1
TPM1-230ENST00000561266 ORAOV1Q8WV07 137 aa8.81□□□□□ -1
TPM1-230ENST00000561266 IGKV2-24A0A0C4DH68 120 aa8.8□□□□□ -1
TPM1-230ENST00000561266 LINC00614P0C842 121 aa8.8□□□□□ -1
TPM1-230ENST00000561266 Q6ZN92 141 aa8.8□□□□□ -1
TPM1-230ENST00000561266 FAM229AH3BQW9 127 aa8.79□□□□□ -1
TPM1-230ENST00000561266 SCO1O75880 301 aa8.79□□□□□ -1
TPM1-230ENST00000561266 C2orf48Q96LS8 159 aa8.79□□□□□ -1
TPM1-230ENST00000561266 CAMK2N2Q96S95 79 aa8.79□□□□□ -1
TPM1-230ENST00000561266 C2orf88Q9BSF0 95 aa8.79□□□□□ -1
TPM1-230ENST00000561266 COLCA2A8K830 154 aa8.78□□□□□ -1
TPM1-230ENST00000561266 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.78□□□□□ -1
TPM1-230ENST00000561266 APOMO95445 188 aa8.78□□□□□ -1
TPM1-230ENST00000561266 TRGC2P03986 189 aa8.78□□□□□ -1
TPM1-230ENST00000561266 INAFM2P0DMQ5 153 aa8.78□□□□□ -1
TPM1-230ENST00000561266 G0S2P27469 103 aa8.78□□□□□ -1
TPM1-230ENST00000561266 MAJINQ3KP22 176 aa8.78□□□□□ -1
TPM1-230ENST00000561266 UNQ6190/PRO20217Q6UXQ8 127 aa8.78□□□□□ -1
TPM1-230ENST00000561266 OR10D4PQ8NGN7 298 aa8.78□□□□□ -1
TPM1-230ENST00000561266 CST9LQ9H4G1 147 aa8.78□□□□□ -1
TPM1-230ENST00000561266 CDKN2A-AS1Q9UH64 79 aa8.78□□□□□ -1
TPM1-230ENST00000561266 PDZD11Q5EBL8 140 aa8.77□□□□□ -1.01
TPM1-230ENST00000561266 C2orf82Q6UX34 121 aa8.77□□□□□ -1.01
TPM1-230ENST00000561266 PLAC8Q9NZF1 115 aa8.77□□□□□ -1.01
TPM1-230ENST00000561266 PKHD1L1Q86WI1 4243 aa8.76□□□□□ -1.01
TPM1-230ENST00000561266 DPH3Q96FX2 82 aa8.76□□□□□ -1.01
TPM1-230ENST00000561266 C6orf48Q9UBA6 75 aa8.76□□□□□ -1.01
TPM1-230ENST00000561266 HNRNPA3P51991 378 aaKnown RBP8.75□□□□□ -1.01
TPM1-230ENST00000561266 LINC00310P59036 64 aa8.75□□□□□ -1.01
TPM1-230ENST00000561266 LINC01561Q8N1V8 128 aa8.75□□□□□ -1.01
TPM1-230ENST00000561266 STPG4Q8N801 248 aa8.75□□□□□ -1.01
TPM1-230ENST00000561266 HBDP02042 147 aa8.74□□□□□ -1.01
TPM1-230ENST00000561266 PTTG1IPP53801 180 aa8.74□□□□□ -1.01
TPM1-230ENST00000561266 GAGE2BQ13066 116 aa8.74□□□□□ -1.01
TPM1-230ENST00000561266 PMVKQ15126 192 aa8.74□□□□□ -1.01
TPM1-230ENST00000561266 PAPPA-AS1Q5QFB9 102 aa8.74□□□□□ -1.01
TPM1-230ENST00000561266 MRPL35Q9NZE8 188 aaKnown RBP8.74□□□□□ -1.01
TPM1-230ENST00000561266 MYCBP2O75592 4640 aa8.73□□□□□ -1.01
TPM1-230ENST00000561266 IGLV5-45A0A087WSX0 123 aa8.73□□□□□ -1.01
TPM1-230ENST00000561266 LOC107984640A0A0U1RRK4 108 aa8.73□□□□□ -1.01
TPM1-230ENST00000561266 TINCRA0A1B0GVN0 87 aa8.73□□□□□ -1.01
TPM1-230ENST00000561266 A0A1W2PNN7 141 aa8.73□□□□□ -1.01
TPM1-230ENST00000561266 PLA2G1BP04054 148 aaKnown RBP8.73□□□□□ -1.01
TPM1-230ENST00000561266 HERVK_113P63121 156 aa8.73□□□□□ -1.01
TPM1-230ENST00000561266 RNF151Q2KHN1 245 aa8.73□□□□□ -1.01
TPM1-230ENST00000561266 C9orf116Q5BN46 136 aaPredicted RBP8.73□□□□□ -1.01
TPM1-230ENST00000561266 LINC01549A6NIU2 74 aa8.72□□□□□ -1.01
TPM1-230ENST00000561266 SMIM1B2RUZ4 78 aa8.72□□□□□ -1.01
TPM1-230ENST00000561266 NDUFA1O15239 70 aa8.72□□□□□ -1.01
TPM1-230ENST00000561266 NUPR1O60356 82 aa8.72□□□□□ -1.01
TPM1-230ENST00000561266 GEMIN7Q9H840 131 aaKnown RBP8.72□□□□□ -1.01
TPM1-230ENST00000561266 RAB5BP61020 215 aa8.71□□□□□ -1.02
TPM1-230ENST00000561266 RPL37AP61513 92 aaKnown RBP8.71□□□□□ -1.02
TPM1-230ENST00000561266 Q6ZRP5 223 aa8.71□□□□□ -1.02
TPM1-230ENST00000561266 FAM19A2Q8N3H0 131 aa8.71□□□□□ -1.02
TPM1-230ENST00000561266 LINC00469Q8N7U9 141 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms